Oncorhynchus tshawytscha (Chinook salmon): 112234713
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Entry
112234713 CDS
T05605
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112234713
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112234713
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112234713
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112234713
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112234713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Bee_toxin
Motif
Other DBs
NCBI-GeneID:
112234713
NCBI-ProteinID:
XP_024258732
LinkDB
All DBs
Position
LG34:15328070..15338012
Genome browser
AA seq
1046 aa
AA seq
DB search
MDKILEALVSSSHSVPVKKAIVKKVVEAAEKEVTAEQCQALYTLTTRLIFLGEDAFQKQV
GFQVLEAYARYHRADFELFFSKDFVLGLLQQGYGPLDRKDPAVVDYIHGCLRLLISCPSV
LDIFSIIQTEILRMVCERPEAALCARLATMLSDFVQCIPREKAAILFCQQLVRTIGYFHC
PASQERELREYVDQVTKVSTLLQNIWKAEPVTLLPSLQEVFAIISSTDPSFDPSIALASL
VQHIPLQMITVLIKSLTTDQNVKDTSMTQALCRMIDWLSWPLAHHVEMWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWYPIVRQGALVVLSHMLLSFQHSPEAFHLVVPHIVNLVQ
SLKHDGLPTSKAFLLHFTELVHCMMYQYSGFPDLYDDILEAIKELPGPGEEKIKLVLNQS
AWTSQSNSFASGLLRLPGKSETGKTGLINLGNTCYMNSIIQTLFSATDFRRLVLSLRLND
ATANTLMKKLQLLFTFLSHTQRAAYAPRVFFEASRPPWFNAGSQQDCSEYLRFLLDRLHE
EEKTIQVLMTAKPNVSPGNGPSDNTGGETSAEDARVSPVAPVEGKSEGNDERTLIERMFG
GRLSTGIRCMTCNSVSEKEEPFTDLSLAFCPSTTSSPLQTEGPSEESRGPCQGAVNGGSE
APEIGPSPKPVTASTTGVHFVPGSSEPPLSVPDLVDYFLAPEILDKENAYFCQKCGSLQR
AERGMRVVAAPEYLILTLLRFSYDAKCHVRRKILDNVTIPPLMRLPVHAPPPKHSSSSSS
PPSSPLQVDSPESSENLAKKLKPSQREEEETGLEGDNGMAGGESAVGVWPAAQFVPYVLS
SVVMHSGMSSESGHYYSYGRNLNGADGAQHHLANPLALGEEPGNGKTEPITLTCSGATHP
KQEVEVYGGQAAGDWLLFNDSRVTFTSLGSVQNVTNRFPKDTAYVLIYRKQDVTGGQNST
GGVTANGMRLGSEPPLQKELMDAVTKDNKLFLQEQELNARTRALQAASASCSFRPNGPDD
NEPPGSCGPSGGGGGGGFNTVNRLVF
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattctagaggcgctggtcagctcctctcactcagtcccagtgaagaaggcc
atcgtgaagaaggtagtcgaagccgccgagaaagaggtcacggcggagcaatgtcaggcc
ctgtacaccctcaccactcgcctcatcttcttgggtgaagacgccttccaaaaacaggtg
ggcttccaggtgctggaggcctatgcccgctaccaccgtgctgattttgagctcttcttc
agcaaagactttgtcctgggcctgttacagcagggctacggccccctggaccgcaaggac
ccggccgtggtcgactacatccatggctgcctgcggctgctgatcagctgcccctcggtg
ctggatatcttctccatcatccagacagaaatcctaaggatggtgtgcgaacgccctgag
gcagccctgtgcgcccgtcttgccaccatgctctcagacttcgtacagtgcatcccccgg
gagaaggcggccattttgttctgccagcagttggtgaggaccattgggtacttccactgt
cctgccagccaggagcgggagctgagggagtacgtagaccaggtgaccaaggtcagcacg
ttgctgcagaacatctggaaggcggagccggtcacactgctgccatctctgcaggaggtg
tttgctataatctcctccactgacccctccttcgacccctccattgccctagccagcctg
gtccagcacatacctctccagatgatcacagttctcatcaagagccttaccaccgaccag
aacgtcaaagacaccagcatgactcaagcactctgcaggatgattgactggttgtcctgg
cctctggcccaccatgttgagatgtgggtcattgccctactgaaggggctggctgcggtg
cagaagttcaccatcctcatagatgtcaccctgcttaagattgaactggtgttcaaccgt
ctgtggtaccccatcgtgcgacagggggccctagtggttctctcccatatgctgctgagt
ttccaacactctcctgaggccttccacttggtcgtgccacacatagtgaacctggttcag
agtctgaagcatgacggcctgcccaccagtaaggctttcctgctgcacttcacagagctc
gtccactgtatgatgtaccagtactctggcttccctgacctctacgacgacatcctggag
gccatcaaagagctacctgggcccggtgaggagaagatcaagctggttctgaaccaaagt
gcctggacgtcccagtccaactcgtttgcctcaggcctgctgaggctgccgggcaagtct
gagacgggcaagactggcctcatcaacctgggaaacacctgctacatgaacagtatcata
cagacactcttctcagccacagatttcaggaggcttgtcttatcgttacgtctgaatgat
gccactgccaacacactgatgaagaaactgcagctcctcttcaccttcctctcacacacc
cagagggcagcgtacgcccccagagtcttctttgaggcgtctcggcccccatggttcaat
gcaggatcccagcaggactgttctgagtacctccgcttccttctggacaggttacacgaa
gaggagaaaactatccaggttctcatgacagccaagccaaatgtctcccctggcaacgga
ccgagtgacaacaccgggggtgaaacctctgcggaggatgccagagtgtcacccgtggcc
cctgtggaggggaagtccgaggggaatgatgagaggacgctgattgagaggatgtttgga
ggcaggctgagcacgggtatccgctgtatgacatgcaacagcgtctcggagaaagaagaa
cctttcactgacctatccctggccttctgtccctccaccacctccagccctcttcagacc
gagggcccctcagaggaatcccggggcccctgccagggggctgtcaacgggggcagcgaa
gctcccgaaataggcccttctcccaaacccgtcacggcctccaccaccggcgtccatttt
gttccagggtccagcgagccaccgctgtctgttcctgacctggtggactacttcctggcg
ccagagatcctggacaaggagaacgcctacttctgccagaagtgtggctcgctgcagcgg
gcggagcgggggatgagggtggtggcggcgcccgagtacctcatcctcacgctgctgagg
ttctcctacgacgccaagtgccacgtgcgccgcaagatcctggacaacgtcaccatcccg
ccactcatgagactgcccgtgcacgcccctccacccaaacactcttcgtcctcttcctcg
ccaccatcctctccactccaagtggactcgcccgagagcagcgaaaacctggccaagaaa
ctgaagccgtcacagagagaggaggaggagactgggctagagggcgacaacgggatggca
ggaggagaaagtgcggtaggggtgtggccggcggcccagttcgttccctacgtcctcagc
tctgtagtgatgcattctgggatgtcgtcggagagcggccattactactcctacggccgc
aacctcaacggggccgacggagcccaacaccacctagccaatcccctcgccttgggggag
gagcctgggaacgggaagactgagcccatcacactcacttgctccggggcgactcatccc
aaacaggaagtggaggtgtacggaggccaggctgccggggattggctgctgttcaacgac
agcagggtaacgttcacttcgttggggtcggttcagaacgtcaccaaccgtttccccaag
gacacggcctacgtgctgatctaccggaaacaggatgttaccggggggcagaacagtacc
gggggagtgacggccaacggcatgagactgggctctgaacctccgctgcagaaagaactg
atggacgccgtcaccaaggacaataagctctttttacaggaacaggaactgaacgcgcgg
acccgagctctccaggcggcctctgcctcctgctcgttcaggcccaacggaccagacgac
aacgaacccccgggcagctgtggtccctcggggggaggaggaggtggggggttcaacact
gtcaacagactggtcttctga
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