Oncorhynchus tshawytscha (Chinook salmon): 112234725
Help
Entry
112234725 CDS
T05605
Name
(RefSeq) tripartite motif-containing protein 3-like isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112234725
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112234725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
DUF5128
Filamin
SGL
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
TEN_NHL
zf-RING_2
zf-RING_5
Invasin_D3
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Mala_s_1-like
Prok-RING_4
Baculo_PEP_C
Med9
YtkA
HH_AprE
TolA_bind_tri
CSPP1_C
Motif
Other DBs
NCBI-GeneID:
112234725
NCBI-ProteinID:
XP_024258760
UniProt:
A0A8C8IW29
LinkDB
All DBs
Position
LG13:complement(62148729..62194901)
Genome browser
AA seq
772 aa
AA seq
DB search
MSVTMAKRETGSTSPVVRQIDKQFLVCSICLDHYHNPKVLPCLHTFCEKCLQNYIPPQSL
TLSCPVCRQTSILPEKGVAALQNNFFITNLMEVLQRDPECSPPEACSVLESVSAAAACQP
LSCPNHEGKVMEFYCESCETAMCLECTEGEHREHVTVPLRDVLEQQKAALKTQLDAIRNR
LPQLRAAIELVGEISKQLTDRKNEAVTEISSTFEELERALHLRKTTLITDLENICCTKQK
VLQAQLSSLLQGKDNIQSCSSFTEQALSHGSATEVLLVQKQMGERVSALARHTYPEQPHE
NSHLDCQVETEGLRRSIQNLGVLITTGAVGHTSVATGEGLRHALVSQHTTVTVTTKDKDS
ELVKTGNAALRAEIVSMDGAVTTETEVVDNKNGTYEVGYTMRSEGEFSFSLLLYDQPVRG
SPFRLRAVKPSDVLQSPDDVKRRVKSPSGTGGHIRQKAVRRPSSMYSTTKKKENPIEDEL
IYRVGTRGRDKAEFTNLQGISTSSNGRIVVADSNNQCIQVFSNDGAFKLRFGVRGRSPGQ
LQRPTGVTVDMNGDIIVADYDNRWVSIFSSDGKFKSKIGAGRLMGPKGVAVDRNGHIITV
DNKACCVFIFQANGKLVTKFGARGTSDRQFTEKSGTNISLEPKLSKSGPAFSPHFVAINN
KNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDANGNIIVADWGNSR
IQVFDSSGSFLSYINTTADPLYGPQGLSLTSDGHVAVADSGNHCFKVYRYLQ
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcaccatggcgaagcgtgagacgggcagcaccagcccagtggttcggcagata
gacaaacagttcctggtctgcagcatctgtctggaccactaccacaaccctaaagtcctg
ccctgcctacacaccttctgtgagaaatgcctacagaactacatcccccctcagtccctg
acactatcgtgtcccgtgtgtcgtcagacgtccatcctgccagagaagggcgtggccgcg
ctgcagaacaacttcttcataaccaacctgatggaggtgctgcagagggacccagagtgt
tctcctccagaggcctgcagtgtgctggagtcagtcagtgctgctgccgcctgccagccg
ctctcctgccccaaccacgagggcaaggtgatggagttctactgcgagtcgtgtgagact
gccatgtgtttggagtgtactgagggagagcacagggaacatgtgactgtccctctgaga
gatgtcttggagcaacagaaagcagccctgaagacccagctggatgccatacgcaacagg
ctgccccagctgagggctgctatagagctggtaggggagatctccaagcagctgactgac
aggaagaacgaggcggtgacagagatcagcagtacctttgaggagctagagagggcgcta
cacctcagaaagaccaccctcatcactgacctggagaacatctgctgcaccaagcagaag
gtgctccaggcccagctctcctctctcctgcagggtaaggacaacatccagagctgcagt
agttttacggagcaggctctgagccatggcagtgctacagaggttctgctggtccagaaa
cagatgggagagagggtcagcgccctggcccgacacacctacccagaacagccccatgag
aacagccatcttgactgccaggtggagacagagggtcttcgtcgttccatccagaatctg
ggtgtgctcatcaccacaggagccgtaggccacacctccgtcgccacgggagagggacta
cgccacgccctggttagccagcacaccaccgtcaccgtgacgaccaaggacaaggacagt
gagctggtgaagacgggcaacgcggcgctgcgggccgagatcgtgtcgatggacggggcg
gtaaccacggagacagaggtggtggataataagaatgggacgtatgaggtgggctatacc
atgcgctctgagggggagttctccttctctctcctcctgtacgaccagccggtccggggc
agtccgttccggctgcgtgcggtcaagccctcggacgtcctgcagtctccagacgatgtg
aagaggagggtgaagagtcctagtgggacggggggccacatcagacagaaggctgtgagg
agaccctccagtatgtacagcaccaccaagaagaaggagaaccccatcgaggatgaactc
atctacagagtcggaactagagggagagataaagcagagtttacaaacctccagggaatc
tccacctctagcaacggacgcatcgtagtggctgacagcaacaaccagtgcatacaggtg
ttctcaaacgatggggcattcaagctgaggtttggggtcaggggtcggtcgccggggcaa
ctgcagcgccccactggggtcaccgtggatatgaacggtgacatcatcgtggccgactac
gacaaccgctgggtcagcatcttctcctccgacggaaagttcaagagtaagatcggtgcg
ggtcgtctgatgggccctaagggcgtggcggtggacaggaacggacacatcatcacagtg
gacaacaaggcctgctgcgtgttcatcttccaggccaatgggaagctggtcaccaagttt
ggagccagggggacgtcagacagacagttcacagaaaaaagtggtacaaacatttcactg
gaaccaaagctgagtaaatctggccctgcgttcagtccccactttgtggcgatcaacaac
aaaaatgagattgtggtaacagacttccacaatcattcggtgaaggtgtatagtgcagac
ggggagttcctgtttaagtttggttcccatggcgaggggaacggacagttcaacgccccg
acgggcgttgccgtggacgccaacgggaacatcatcgttgccgactgggggaacagcaga
atacaggtgtttgatagttccgggtcgttcctgtcctacatcaacaccacagcagaccct
ctctatggtccacagggcctgtctctcacctctgatggacacgtggctgtggctgattct
ggcaaccactgcttcaaggtttaccgctacttgcagtag
DBGET
integrated database retrieval system
