Oncorhynchus tshawytscha (Chinook salmon): 112234745
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Entry
112234745 CDS
T05605
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112234745
Cell adhesion molecules [BR:
otw04515
]
Cadherins
Cadherin related
112234745
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GFIT
Motif
Pfam:
Cadherin
RET_CLD1
Cadherin_pro
Glrx-like
Motif
Other DBs
NCBI-GeneID:
112234745
NCBI-ProteinID:
XP_042152054
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Position
LG13:complement(62444520..62469115)
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AA seq
620 aa
AA seq
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MKTEAKGLGRSMSRSLQDEGRWSRGVLLLAYIVLELITVHSSTVLGNLELQLDEEQPAGT
IVGDISAGLPPGVTASLYFISDHEGTGVGSDLDIDESTGIIKTAKVLDHELRDRYNFIAV
TMTGLTIEVTITVNDINDHAPTFPRRRAAFKIPEMTAVGTRFPLEPAVDGDKGQLTTQGY
LIKDGNPGQAFLLETRRGSNQVLYLDLVVNTLLDSETRPSYTLSLEAFDGGSPKRTGQMV
LDVMVQDINDNVPVFNQSRYHAIISENLQPGSNILQVFASDADQGDNGLVLYEINRRQSD
PEHYFIIDSRMGVITLNKPLDFEMRRVHELVVQARDNATQPEVTNAFVTIHVRDYNDNQP
TMTIIFLSEDGSPQISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDNI
IYLMCVDQILDREERDTYELRVMATDAGTPPLRAESSFTIQVTDVNDNPPLFDQQEYRQA
IPEVVFPGSFVLQVTARDNDQGPNGDITYSLLQDGQAGQDENQAQWFTIDPVTGIITTLS
QLDYESQPRPSVTVVATDGGRPSLSSTALVHVVLQDINDNEPVFGSNFYNVSIKENTAAG
SCILQVGHCLFCFSSQPVDR
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgaggccaagggtttggggcggtctatgtcgaggtcgctgcaggatgagggc
cggtggagccgaggggtcctgctgctggcctacatcgtcctggagctgatcaccgtccac
tcctccaccgtcctggggaacctggagctccagctggacgaggaacagccagccgggacc
atcgtaggggacatcagcgctgggttaccgcctggcgtcaccgcaagtctttacttcata
tcagaccatgagggcaccggggtggggagtgacctggacatagatgagagcacgggcatc
atcaagacagccaaggtgttggaccatgagctgagggaccggtacaacttcattgccgtg
actatgacgggcttgaccattgaagtgacaatcacggtgaatgacatcaatgaccacgct
cccacgttcccccggaggagagcggcgttcaagatcccggagatgacggcagtgggaacc
aggttccccctagagccggcggtggatggggacaagggccaactgactacccagggatac
ctcatcaaagacgggaaccccggccaggctttcctcctggagacccggagaggatcaaac
caggttctctatctggatctggtggtcaacactcttctggacagtgagaccagaccgtct
tatactttatccctggaggcgttcgatggaggctcccctaagaggactggtcagatggtg
ctagatgtgatggttcaggatatcaatgacaacgttccagtcttcaaccagagtcgctac
cacgccattatctcagagaatctacagccgggtagcaacattctccaagtctttgcctct
gacgctgaccagggagacaacggccttgttctctatgagatcaaccgcaggcagagcgac
ccagagcactacttcataatcgactcgcggatgggtgtcatcacgctcaacaagccgctg
gactttgagatgcggagggtccacgagcttgtggtccaggcgagggataacgccacgcag
cccgaggttaccaatgccttcgtcacaatccacgtccgggactacaatgacaaccagccc
accatgaccatcatcttcctcagcgaagacggctccccacagatctccgagggcgcccag
cctggccagtacgttgcacgcatctccgtcaccgacccggactacggagaatacgccaat
gtcaacgtctccttggaaggaggggacgggaagtttgccctgaccaccaaggacaacata
atctacctgatgtgtgtggaccagatcctggaccgagaggagagggacacatacgaactc
agggtgatggctacagacgcaggcacccctcctctcagggctgagtcctcctttacgata
caagtcactgacgttaatgacaaccctcctctgtttgatcagcaggagtacaggcaggca
atacctgaggtggtgttcccagggagcttcgtgttgcaggtcacggcgagggacaatgac
caggggcccaatggagacatcacatacagcctcctccaggatggccaggccggccaggat
gagaaccaggcccagtggttcaccatcgacccagtaacagggataatcaccacgctctcc
cagctggattacgagtcgcagcccaggccaagtgtgactgtggtggctacagacggaggg
aggccttccctgtcctccacagctctggtccatgtggtactacaagatattaatgacaac
gaacctgtgttcggtagcaacttctacaacgtatccatcaaggagaacacggctgctggg
tcctgcatcctacaggtaggacattgtctattctgtttttctagtcaacctgtcgacaga
tga
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