Oncorhynchus tshawytscha (Chinook salmon): 112234746
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Entry
112234746 CDS
T05605
Name
(RefSeq) BCAS3 microtubule associated cell migration factor-like isoform X1
KO
K24550
breast carcinoma-amplified sequence 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112234746
03036 Chromosome and associated proteins [BR:
otw03036
]
112234746
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Others
112234746
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
112234746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCAS3_WD40
WD40
BCAS3
PROPPIN
DUF6590
Motif
Other DBs
NCBI-GeneID:
112234746
NCBI-ProteinID:
XP_042152059
LinkDB
All DBs
Position
LG13:complement(62735857..63084155)
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AA seq
938 aa
AA seq
DB search
MASESPRRPSRCAGGVVVRAQAATEQSYMESVVTFLQDVVPQAYTGAPPTDEKEKIVWVR
FEKADINDTSRSPEFLEMHSGSSDPPLCLMIGYADGMQIWSISLGGEAQELFSVRHGPVR
AAHILPAPHISPLMIDSFADKRPLLGVCKSTGSSGTSPPYCCVDLYSLRTGEMVKSIQFK
TPIYDLHCNREILVVALQEKIAAFDSCTFTKKFFVTSCFPCPGPNLNPIALGGRWLAYAE
NKLIRCHQSRGGACGDNAQSYTATVISAAKTLKTGLTMVGKVVTQLAGTLPTGAPDEEGA
TPHSTTRRSPHAPGVITVIDTHNVGEGQVLVSEDSDGEGVVAHFPAHDKPISCMEFNPSG
MLLVTADTLGHDFHVFQVLTHPWASNQSAVLHLYTLHRGETEAKVQDICFSQDSRWVVIS
TLRGTSHVFPINPYGGAPCARTHMSPRVVNRMSRFQKSAGLEEIENELNSKQAGGGRCSP
IPGLSSSPSGSPLHGAKCRKKSENRAKLTSQESYNNFTNNNMGNPRLSPLPSLTIVLPLA
QIKQPMTLGTMTKRSGPYLFGAGCFAIKTPCKAKPLPQISPSKSSGGEFCVAAVFAASRS
WYMTNPNMKREKDQSSRSVVESLYILSCYGTLVEHVLEPRPISTAQKISDDTPLELNTCP
RACWSLARTPLWNELQPPFLSNHPLVLASDLVQYYQYLLAGLVPPGSPGPITRHESYDSL
TSDHSGQEDEEWLSQVEIVTHTGPHRRLWMGPQFQFKTIHPSGQTTVISSSSSVLQSQGP
SDIQQPLLDFHTDDLDLHSLRIQPVRSEPVSMPGSSRLVAERRGQGTVIDIGSGTFDRSV
TLLEVCGSWPESFGLRHMSSVESTEEGLRERLADAMSESPSRDIVGSATELQREGSIETL
SNSSGSTSGSIPRNFEGYRSPLPTNESQPLSLFPSGFP
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagaatctccgcgcagaccaagccgctgtgctggaggggttgtggtgcgagca
caagctgccactgagcagtcgtatatggagagtgttgtgaccttcctccaagatgtggtc
cctcaggcatacactggcgcacccccaactgatgaaaaagagaaaatagtttgggtcaga
tttgagaaagccgacatcaatgatacatcccgctccccagagttcctggagatgcacagt
ggcagcagtgaccctcccctctgcctcatgattggttatgcagacgggatgcagatctgg
agcatatccctgggtggagaggcccaggagcttttctctgtgcgccacggacctgtgaga
gctgcccacatcctgccagcgccccatatcagtccgctgatgattgatagttttgcggac
aaaaggcctctcctgggggtgtgcaagagtaccgggtcctcggggaccagccccccatac
tgctgtgtggacctgtactctctgaggacaggggagatggtcaagtccatccagttcaag
acgcccatctacgacctgcactgcaatagggagattctagttgtcgccctgcaggagaag
attgctgcattcgacagctgtaccttcaccaaaaagttctttgttacaagctgctttcca
tgtccgggccccaacctaaaccccatagcactgggaggacgctggctagcctacgctgag
aataagttgatccggtgtcaccagtctcgaggcggggcctgtggggacaatgcccagtct
tacacagctactgtcatcagcgctgctaaaaccctaaagactggtctcaccatggtgggg
aaggtggtgacccagctagctggtactctacccactggcgcccctgacgaggagggtgct
accccccacagcaccacccgccgaagcccccatgcccccggagtaatcaccgtcattgac
acacacaacgtcggagagggacaggtcctggtgagtgaggactcagatggagagggagtg
gtggcccacttcccagcccatgacaaacccatatcctgcatggaattcaaccccagcggt
atgctgctggtgactgcagacaccctgggccatgacttccatgtgttccaggtcctcaca
cacccctgggcctccaaccagtctgctgtcctccacctctacacactgcaccgcggagag
actgaggccaaggtccaggacatctgttttagccaggacagtcgctgggtggtgatcagc
acactgcgtggcacctcccacgtctttcccatcaacccctacggtggtgcgccttgcgcc
cgcactcacatgtccccccgcgtggtcaaccgcatgtcccgcttccagaagagtgcaggg
ctggaggagatagagaatgaactgaacagcaagcaggctggaggagggagatgcagcccc
atccctgggctctccagcagtccctcggggtccccactacacggagcaaaatgcagaaag
aaaagtgaaaatagagctaaactcaccagccaggagtcgtacaacaacttcaccaacaac
aacatgggtaaccctcgtctgtcccctctgcccagccttaccatagtgctgcccctggca
cagatcaagcagcccatgaccctgggcaccatgaccaagcgctccggaccttacctcttt
ggggcaggatgttttgccattaaaactccatgcaaagccaagcctctccctcagatctcc
cccagtaagtccagtggaggagagttctgtgtggctgctgtctttgctgcctcacgctca
tggtacatgaccaaccccaacatgaagagagagaaagaccagtccagccggtcagtggtg
gagtccctctacatcctcagttgctatggcaccctggtggagcacgtcctggagcctcgg
ccaatcagcacagcccagaagatcagcgatgacacacccctggagctcaacacatgtcca
cgggcctgctggagcctggccaggactccactgtggaatgagctgcagcctccctttctc
tccaaccaccctctggtgctggcctctgacctggtgcaatattaccaatacctcctggct
ggattggtgccccctggaagccctggccctatcacgcgccacgagtcttacgacagcctg
acgtcggaccacagcggacaggaggacgaggagtggctctcacaggtggagatagtcacc
cacacagggcctcaccgtcggctgtggatgggtcctcagttccagtttaagaccatccac
ccatctggtcagactacggtcatctcctcctcctcctctgtgctgcagtcccagggcccc
agtgacattcaacagcctctgttggacttccacactgatgacctggacctacacagtctc
aggatccagcccgtgcgttctgagccggtcagcatgcctggttcctctcggctggtggct
gaacggaggggacaggggacggtcattgatataggatcggggacgtttgaccgcagtgtg
accctgctggaggtgtgtggaagctggccagagagctttggcctgcgtcacatgagctct
gtggagtccaccgaggaggggctgagagagaggctggcagacgccatgtcagagtcacca
tccagagacatagtgggctcggctaccgagctccagagggagggcagcattgagactctc
agcaacagctctggttccaccagcggctccatcccccgtaactttgagggctaccgctct
ccactgcccaccaacgagagccagcccctcagcctcttcccctccggattcccctag
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