Oncorhynchus tshawytscha (Chinook salmon): 112234817
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Entry
112234817 CDS
T05605
Symbol
arhgef10
Name
(RefSeq) rho guanine nucleotide exchange factor 10 isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112234817 (arhgef10)
03036 Chromosome and associated proteins [BR:
otw03036
]
112234817 (arhgef10)
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112234817 (arhgef10)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
112234817 (arhgef10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
AAA_30
Motif
Other DBs
NCBI-GeneID:
112234817
NCBI-ProteinID:
XP_042186032
LinkDB
All DBs
Position
LG11:complement(38619877..38728691)
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AA seq
1475 aa
AA seq
DB search
MPRETATSMDIVEDFPPPPPEMLADEVPYADEEEGEQFEFDDSGDEYPEADRPPHAPPAP
DYGGKAQINGVAPHPQQEGPDPRPSNPEPTAAAAVDTDTVAAEPPVPVAMATTDTVASAP
DPPVANAPTETTAPVAAAEGDKTASVPAGADRDLPPPPPTEDSTPVGTDSVNTNKEVSSD
DPPPAVPRTTSQRKVNPYSVIEITPLQLQQLEQQHGPVPTSSSPVERVGGEGEREGKGQD
VPPASPLCVPPGYSVPVPCGYATPSGVPLITPAYTTPVIIRHFSVDEEDTVVGTGNISVD
IEEYPAIREEDALSKWVSDPANTAWMENPDEVIYDDVPRENSDSTTEPDEMIYDDVEFGE
EGCGSSLDNGWSSSEFESYDEQSDGEGRGENGLPDAFMRGKPPQRKTHLSQDLTRLKEHY
EKKMKDLMANTVGTVELQQIKQKHEQKMQKLVKAARDGTKDGLEKTKAAVRRGRSYIKTH
CHERKSTCFEDEESELFIEVECFNMEPVLSPVPEGLSQQQVVRRCILGSILESEKNYLDA
LKRILEQYEKPLLEIEPRLLSDRKLKVTFYRIREILQCHALFQIALACRVAEWDSLEMIG
DVFVASFSKSMVLDAYCEYVNNFSTAMAVVRKTCASKPSFLDFLKQRQDTSSDRVTLYGL
MMKPIQRFPQFILLLQDMLKNTPAGHSDRLPLQMALTELETLAEKLNEKKREADQRCEIR
HIAKAMNERYLNKLLSNGSRYLIRSDDIVETVYNDHGEVIKTKERRLFLLNDVLMCATPN
VRCSVDGSGSGNAALGQKFLLKWSVPLSFVDVVEFGSSEDMGDNSRFTPQPHSGEKVIIN
AKPNKLYMGPGQLYQDLQNLIHDLSLVNQISSMIGSLKGNYQNVNPAVAHDWVSGLQRLI
LKKEEEIRAADRCRIQLQLPGKPDKSGRPTYFSAVFNTFSPAIKQSWISNLQMAKLALEE
DNLQGWFFAEDDGNQIKKQKHPLLLRQMPVVMSKLQEFKVECAVHNPEPHINIESTADTP
ALGHGCVWVASCTNQMGQIAIVAMQNSSPKVTECFNVESRILCMAYVPMEQRTQENGEGN
PENNHSSAGKTSDAPTVCLGMEEGSIIVYKSSQRSKKVRLQHFFTPDKSTVTSLVHKKQC
LYTGLVNGSVTIYSRAQDGSWNPDSPKVLKLGVLPVKAMLAVEEHVWASSGGQVFIISTT
THTVERQLEAHQEEGMVVSHMVVAGVGIWIAFSSGSTLRLFHTETLEDLQDINIATPVHN
ILAGNQRVSVSSLLVCHGLLLVGTNLGVTVALSVPRLQGIPKVTGRGMVSFHAHHGPVKF
LTMAAAVCNRPSGNPGSSLPSQPGGTKDGEKAQASPPPTPGSTPTLAHTQGRGVWLGEAG
CTSMALQDSLSSSCGSLALSQGSLEHGLEDGAIYDLVNDPAHHQRGRRVQKVDVSSLLVV
SGGLGHHRVNRKTKQSRQEETVSNIMVWQIPLLNM
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgcccagagaaacagcaaccagtatggacattgtggaagacttccctcccccgcctcct
gaaatgttggcggacgaggtgccctatgccgatgaagaagagggggagcagtttgagttt
gatgacagtggggatgagtaccctgaggcagaccggccaccccatgcccctccagcccca
gactacgggggcaaggcccagatcaatggtgtggcacctcacccacagcaggaaggacca
gacccccggccctccaacccggagcccacagcagcagcagcagtggacacagacacagtg
gcagctgaaccaccagttccagtagccatggctacaacagacacagtggcatcagcaccg
gatcctccggtagccaatgctccaacagaaacaacagctccagtggcagcagcagaaggg
gacaagactgcatctgtcccagctggcgcagaccgtgacttaccccctcctccacccaca
gaggactccactcctgtaggaacagactccgtgaacacaaataaggaagtgtccagtgat
gaccctcccccggccgtccccaggaccacctcccagaggaaagtcaacccctactctgtg
attgaaatcacccccctccaactacagcaactggagcagcagcatgggcccgtccctacc
tcttcctcaccggttgagagggtaggaggagagggggagagggaggggaagggccaggat
gttccccccgccagccccctctgtgtcccaccgggctactctgtgcccgtgccctgtggg
tacgccaccccctctggtgtgcccctcattacgccagcctacaccacgcccgtcatcatc
cgacacttctccgtggacgaggaggatactgtggtggggacaggcaacatttctgttgat
attgaagagtatcctgccatcagagaggaggatgctttgtctaaatgggtgtcagaccct
gcaaacacagcctggatggaaaatccagatgaagtcatttatgatgacgtgcccagagag
aactctgactccactacagagccagacgagatgatctatgatgatgtggagtttggggag
gagggctgtggcagctccctggacaacggttggagttccagcgagtttgagagctatgac
gagcagagtgacggggagggccgcggggagaatggcctgcctgacgccttcatgagaggg
aagcccccacaaaggaagacccatctttctcaagatctgacacgcttgaaagaacactat
gagaaaaagatgaaagatcttatggcaaatacagtgggaacagtagagctgcagcagata
aaacagaaacacgagcagaagatgcaaaagctggtgaaggcagcgagagatgggaccaaa
gacggcctggagaaaaccaaagcagcagtgagaaggggaaggtcgtatatcaagacccac
tgtcacgagaggaagtcaacctgttttgaggatgaggagtcagagctattcatcgaagtg
gaatgcttcaacatggagccagtgctcagtcccgtccctgagggtctctcacaacaacag
gtggtgaggaggtgtatactgggctccatattagagagtgagaagaactatctggatgca
ctgaagcggattttagagcaatatgaaaagccacttttggagattgagcccaggttgcta
agcgataggaagctgaaggtgacattctatcgtatccgggagattctccagtgccacgcc
ctgttccagatcgccctggcgtgccgcgtggccgagtgggacagtctggagatgatcggg
gacgtctttgtagcctcgttctccaagtccatggtgctggatgcctactgtgagtatgtg
aacaacttcagcacagccatggcggtggtcaggaagacgtgtgcctccaaacccagcttc
ctagacttcctcaagcaacgtcaggacaccagcagtgaccgggtcactctctacggactc
atgatgaagcccatccagagattccctcagttcattttactgctgcaggacatgttgaag
aacacaccagcaggccacagtgacagactgcccctacagatggccctgacagaactggag
accctggctgaaaagctcaatgagaagaagcgggaggctgaccagcgctgtgagatcaga
cacatagccaaggccatgaacgaacgctacctcaacaagcttctgagtaatggcagccgc
tacctgattcgctctgatgacatagtggagacggtctacaacgaccacggagaggtgatc
aagaccaaggagcgacgccttttcctgctcaacgacgtgctcatgtgtgccacgcccaac
gtccggtgcagtgtggatggcagtggtagtggcaacgccgctctgggtcagaagttcctg
ctgaagtggagtgtccctctgagctttgtggacgtagtagagtttggctccagtgaagac
atgggtgacaacagccgcttcaccccacaaccccactctggagagaaggtgatcatcaat
gccaaaccaaataagctgtacatgggtccaggccagctgtaccaggacctgcagaacctc
atccacgacctcagcctggtcaaccagatctccagcatgatcggaagcctcaagggaaac
taccagaacgttaaccctgctgtggcccatgattgggtgtcaggtctgcagcgtctcatc
ctgaagaaggaggaagagatccgggctgcagaccgctgtaggatccagctgcagctgcct
ggcaaaccggacaaatctggcaggcccacatacttcagtgcagtgttcaatacgttctct
cctgccatcaaacagtcatggatcagtaacctgcagatggccaagcttgctctggaggag
gacaacctgcagggctggttctttgcagaggatgatggtaaccagataaagaagcagaaa
catcctctcctgctcaggcagatgcctgtggtcatgtccaaactacaggagttcaaggtg
gagtgtgcggtccataaccccgagccccacatcaacatagagagcacagcagacacccct
gctctgggacacggctgtgtgtgggtggcgagctgcaccaaccagatgggtcagatagcc
atcgtagccatgcaaaactccagccccaaagtgacagagtgcttcaatgttgagtcacgg
atcctgtgtatggcgtacgtacccatggagcagaggacccaggagaacggggaggggaac
cctgaaaataatcactcctcagcagggaagaccagtgatgcccccacggtctgtctgggc
atggaggagggcagcatcatagtctataagagcagccagagatccaagaaggtccgtcta
caacacttcttcaccccagacaagtctaccgtgaccagcctggtacacaagaagcagtgt
ttatacactggcctagtgaacggctcagtcaccatctactccagagcacaagatggctcg
tggaatccagactctcctaaggtgctgaagctgggggttctgccagtgaaggccatgcta
gctgtggaggaacatgtctgggcttcctctggaggacaagtcttcatcatcagcactacc
acacacactgtggagaggcagctggaggcccaccaggaggagggcatggtggtatcccac
atggtggtggctggggtgggtatctggatagccttcagctctgggtccaccctcagactg
ttccacacggagacactggaggatctacaggacatcaacatcgctacacctgtacacaac
atactggctgggaaccagagggtctcagtcagcagtctgctggtgtgccatggtctgctg
ctggtggggaccaacctgggggtgacagtggccctctctgtccccagactacagggaatc
cccaaggtcactggacggggcatggtatccttccacgcccaccatggcccagtaaagttc
ctcaccatggcagccgcagtgtgcaaccggccctctggcaacccaggcagcagcctacct
agccagccaggaggcaccaaggacggggagaaggcccaggcctccccacctccaacccca
ggctccacacccactctagctcacacccagggccggggagtgtggctgggggaggcagga
tgcacttccatggccctccaggactccctgtcctcctcctgtggctccctggctctgtcc
cagggctctctggagcacgggctcgaggacggggccatctatgacctggtcaatgatccg
gcccaccaccagaggggcaggagagtccagaaggtggacgtcagctctctgctggtggtt
tcaggggggctgggtcaccacagggtcaataggaagaccaaacagtcccgtcaggaggag
actgtgtccaacatcatggtgtggcagatccctctactcaacatgtga
DBGET
integrated database retrieval system
