Oncorhynchus tshawytscha (Chinook salmon): 112234837
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Entry
112234837 CDS
T05605
Name
(RefSeq) DNA topoisomerase 2-beta-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otw03032
]
112234837
03036 Chromosome and associated proteins [BR:
otw03036
]
112234837
Enzymes [BR:
otw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
112234837
DNA replication proteins [BR:
otw03032
]
Eukaryotic type
DNA Topoisomerases
112234837
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
112234837
Centrosome formation proteins
Centriole proteins
112234837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
112234837
NCBI-ProteinID:
XP_042165975
LinkDB
All DBs
Position
LG31:complement(17047533..17092576)
Genome browser
AA seq
1655 aa
AA seq
DB search
MSNGAAGSGGLTWVTLFDKKNAAKKREEEAAAAAAAANGRGDGGKPEGGGGGAKRKGGEK
LSVERVYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDEDLGMNLREITYVPGLYKIFDE
ILVNAADNKQRDKSMSTIKISIDPESNTITIWNNGKGIPVVEHKDEKMYVPALIFGHLLT
SSNYDDEQKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWQNNMGKTSDPKIK
FFDGDDFTCVTFQPDLSKFKMEKLDKDIVALLTKRAYDIAGSCKGVKVMLNGKKLPVTGF
RSYVDLYVKDKLDEVGVALKVVNESVNERWEVCLTMSEKGFQQISFVNSIATTKGGRHID
YVVDQIVAKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKS
FGSKCPLSEKFIRAATNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDA
GGKHSSECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEI
NNIIKIVGLQYKKSYDDPESLRSLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKH
TFLEEFITPIVKVNKNKQEHAFYSIPEFDEWKKQTVNFKTWHIKYYKGLGTSTSKEAKEY
FADMEKHRIMFRYAGTEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYG
TQAKHLSYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCMKRNDKREVKVAQL
AGSVAEMSAYHHGEQSLLMTIVNLAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIF
TMLSPLAKMLFPAVDSSLLKFLNDDNQKVEPEWYIPILPLVLVNGAEGIGTGWACKIPNY
DHREIVNNLYRMLNMQDPLPMLPSYKNFKGVIHELGQNQYMVSGEISVLDKNTIEITELP
VRTWTQAYKESVLEPMLQGTEKTPALINDYKEYHTDQTVKFVVRMSEEKLAQAEAAGLHK
VFKLQSSLTCNSMVLFDHMGCLKRYDSVQDILKEFFELRLHYYKLRKDWLVGSLGAEASK
LSNQARFVLEKIEGKITIENKSKRDLIRMLVQKGFDSDPVAAWTKAQEKALEEDDRDGND
SDGSVDSVSLSGPNFNYILNMPLWCLSKEKVDELLRQRDIKKGELNELQRKSPEDLWKED
LAVFIEELDKIEAQEQADMSAGRGTKLVKGKVGKPKVKKLHLEETLPSLYGRRVVPTITQ
AMKTDASKKMTKKKKGDADLVMKLEFDDEMGVLGSDGGTGENSLNSSSNTPAPTPSKPKA
PRVKQEKKEPGTPRARKPPTPKGSSGKKGKKRNPWSEDESKSESDLEDSEPVVIPRDTKS
QRASAAKPKYTFDFSEEEDGGEEEDDDDDAASSPARPCKDDFTASSETKDRYNDHSNDDE
DIFPSPKQTTTTVSPAKKKKEPESIFSSSKSACSSEKSNDSDDLKLDSDGDDKAFSYSSS
SAFDKPVPAKKAVKKPSDAAPKPRKAPVPKEPPKQKLDTSVWDSDSDNGTKKPTTPLKGK
GGGRKRKQSESEEYDFSPKKTPGKTPKAPTSRKLSKKAAVTPPPMSDDDDVDSNRFSQSG
TASRDRPCRSRAKKEVKYFAESASGSDDDQYDMFD
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgcagcaggaagtgggggtctgacttgggtgaccctctttgataagaag
aatgctgccaaaaagagggaggaggaggcggcagcagcagcggcggcggcgaacggcagg
ggcgatgggggcaagcccgagggaggaggtggaggagccaagaggaagggaggagagaag
ttgtcagtggagagggtgtaccagaagaagacccagctggagcacatcctactgaggccc
gacacctacatcggctctgtggaaccggtcacccagcaaatgtgggttttcgatgaagac
cttggaatgaatctacgagaaatcacctacgtccctggattatacaaaatctttgatgaa
attcttgtcaacgcggccgacaacaaacagcgggataagagcatgtcgaccataaagatc
tccattgatccggagtccaacaccatcaccatctggaacaatggtaaaggcatccctgtg
gtggaacacaaagatgagaagatgtacgttcccgctctcatcttcggacacctcctcacc
tccagtaactacgacgacgagcagaagaaagtcacaggtggaaggaacgggtacggtgct
aaactctgcaatatcttcagcacaaagttcacagtggaaactgcctgcaaggagtacaaa
cacagcttcaaacagacctggcagaacaacatggggaagacgagcgaccccaagataaag
ttctttgatggggacgacttcacgtgcgtgaccttccagccggacctgtccaagttcaag
atggagaagctggacaaggacatcgtggctctgctcaccaagagggcttacgacattgct
ggctcctgcaagggcgtcaaagtcatgctcaacgggaagaaactccctgtgacagggttc
cgcagctatgtggacctgtacgtgaaggacaagctcgatgaggtgggcgtggccctaaag
gtggtcaacgagtccgtcaacgagcgttgggaggtgtgtctcaccatgagtgagaaggga
ttccaacagatcagctttgtcaacagtatcgccaccaccaagggtggcagacacattgat
tacgtggtggaccagatcgtagccaagctgatagaggtggtgaagaagaagaacaaagct
ggtgtctcagtcaaacccttccaggtgaagaaccacatctgggtgtttgtgaatgcgttg
atcgagaacccaacgtttgactcccagaccaaggagaacatgaccctccaaaccaagagc
tttggttctaagtgtcctctgtctgagaagttcatcagagcggcgactaactgtggtatt
gtggagagtatcctgaactgggtgaagttcaaggcccagacacaactcaacaagaagtgt
tcttcagtgaagtacagcaagattaaaggcattcccaagctggacgatgccaacgatgcc
ggtggtaaacactcgtctgaatgcactctgatcctgactgagggagactcagccaagtcc
ctggccgtctccgggctcggcgtcatcgggcgtgatcgctatggtgtcttcccactaaga
ggaaagatcctgaatgtacgagaggccacacacaaacagatcatggagaatgcagagatc
aacaacatcatcaagatcgtgggtctgcagtacaagaagagctacgacgacccagagtct
ctgagatccctacgctacggcaagatcatgatcatgaccgatcaggatcaggatggctcc
catatcaagggtttgctcatcaacttcttccatcacaactggccatccctgctcaaacac
accttcctggaggagttcatcacgcccatcgttaaggtgaacaagaataaacaggagcat
gctttctacagcattccagagtttgacgaatggaagaaacagacagtcaactttaaaacc
tggcatataaagtactacaaaggtttgggtaccagcacaagcaaggaggccaaggagtac
tttgcagacatggagaaacaccggatcatgtttagatacgccgggacagaggacgatgct
gccatcacactggcgttcagtaagaagaagactgacgacaggaaggagtggctcaccaac
ttcatggaggacaggagacagaggaggatgcacggcctgccagagcaatacctgtacggc
acgcaggcgaaacacctctcctacaatgacttcatcaataaagaactcatcctcttctct
aactccgacaacgagagatccatcccatccttggtggacggactgaagccaggccagagg
aaagtgctgttcacctgtatgaagaggaatgataagagggaggtgaaggtggctcagctg
gctggttcagtagcagagatgtctgcctaccatcacggagagcaatccctgttgatgacg
attgtgaacttggcccagaactttgtgggcagcaacaacgtgaacatcctgcagccgctg
ggtcagtttggtacccgcatcaacgggggcaaggatgctgccagcccccgttacatcttc
accatgctcagtcctctggccaagatgttgttcccagcggtggactccagcctgctgaag
ttcctgaatgatgacaaccagaaggtggagccagagtggtacatccccatcctccctttg
gtgctggtgaacggggccgagggcatcgggacgggctgggcctgcaagatccccaactac
gaccacagagagatcgtcaacaacctgtaccgcatgctcaacatgcaggaccccctgccg
atgctgcccagctataagaactttaaaggcgtgatccatgagttgggtcagaaccagtac
atggtcagtggagagatctctgtcctggacaagaacaccattgagatcactgagctgccc
gttcgcacctggacacaggcctacaaggagtcggtactagagcccatgctccaggggaca
gagaagactccagctctgattaatgactataaggagtaccacacggaccaaactgtcaag
tttgtagttcgcatgtcagaggagaagctggcccaggcagaggctgctggactacacaaa
gtcttcaagctacagtccagcctcacctgcaactccatggtgttgtttgaccacatgggc
tgtctgaagaggtatgactcggtccaggacattctcaaggagttctttgagctgcggttg
cactactacaaactgaggaaggattggttagtggggagcctgggggcggaggcttccaaa
ctgtccaatcaggcacgatttgtactggagaagatcgaaggaaagatcacaatcgagaac
aagtctaagagggatctgatcaggatgctggtgcagaaaggctttgattcggaccctgtg
gcagcatggaccaaagcacaggaaaaggctctggaggaggatgatcgtgatggtaatgac
agtgatggctctgtggactctgtgtcattgtcgggaccaaacttcaactacatcctcaac
atgcctctgtggtgcctgtccaaggagaaggtggacgagctgctccgacagagagacatc
aagaaaggagaattgaatgagctgcagaggaagtctcctgaggatctgtggaaggaggac
ctggccgtcttcattgaagaactggataaaatcgaggcccaggagcaggcagacatgagt
gcaggtagaggcaccaagctggtgaagggcaaggtgggcaaacccaaggtgaagaaactc
cacctggaggagacgctgccctcgctgtacggccgcagggtcgtacccaccatcacacag
gccatgaagactgacgcctccaagaagatgaccaagaagaagaagggtgatgcggacctg
gtgatgaagctggagtttgatgatgagatgggagtgctgggatcagacgggggaacaggg
gagaactccctcaactcctcctctaatacaccagccccaaccccatccaagcccaaggcc
ccccgggtcaaacaggagaagaaggagccaggtactcccagagccaggaaaccccccaca
cccaaaggatcatctggtaagaaggggaagaagcgtaacccctggtcggaggacgagtcc
aaatcagagagcgacctggaggacagtgaacctgtggtcatcccccgagacaccaagtca
caacgggcctcagcggccaagcccaagtacacatttgacttcagtgaggaagaggatgga
ggagaggaagaggatgatgatgatgatgctgcatcctcgccagcccggccctgcaaagat
gacttcactgcctcctccgaaactaaagaccgatacaatgaccacagcaatgatgatgaa
gatatcttcccatcgcccaaacagaccaccaccaccgtctcaccagcaaagaagaagaag
gaaccagagagtatattctcctcctccaaatcagcctgctcctctgaaaagagcaatgac
agtgacgatctgaagttggacagtgacggggatgacaaggccttctcatactccagcagc
tctgccttcgacaaacctgtcccagctaagaaagcagtgaagaagccttcggatgcagct
cccaaacccaggaaagcaccagtacccaaagagccaccaaaacagaagttggacacgtcc
gtttgggactccgactcagataacggaaccaagaagcctacaacaccactcaaaggtaaa
ggtggagggaggaagaggaaacagtctgaatctgaagagtatgatttcagtcccaagaag
actcctgggaaaacacccaaagcccctaccagtaggaaactgtcaaagaaagcagccgtg
accccaccccccatgtcagatgatgatgatgtagactccaaccgtttcagccaatccggc
acggcatcccgagaccgaccgtgcagaagcagggccaagaaggaagtgaagtactttgct
gagtcagcgtcagggtcagacgacgatcagtacgacatgttcgactag
DBGET
integrated database retrieval system
