KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112234880
Entry
112234880         CDS       T05605                                 
Name
(RefSeq) LOW QUALITY PROTEIN: leukocyte receptor cluster member 8 homolog
  KO
K23802  SAC3 family protein LENG8/THP3
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:otw03019]
    112234880
Messenger RNA biogenesis [BR:otw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112234880
SSDB
Motif
Pfam: SAC3_GANP
Other DBs
NCBI-GeneID: 112234880
NCBI-ProteinID: XP_042160976
LinkDB
Position
LG23:26427492..26441920
AA seq 857 aa
MAANTTQTAPAANWSYGAAAGPEGQTVSENPEWEKARQALASISKTQSATKTAQANRTTA
QAGQFQPAVTESTAIQQQQQQQYYQQWYQQNQQQPYPGYTYPYNYYYPMAPGPYGGGGYP
PQGQYGVPPGPYPSPTTPTGQPPSLPVMDDQSSSYPSQPQPPPPAAPQPPPXSPTSSEQP
PPPPPPAIPPTPSSQYPLPPGQNSYNPNNPMPYPNNDPNQMRGYNHNQGRPSYGQSYQTQ
NSYQQQQNNNQHQQQGQGQYGPGAGRGEANKNKNHQQQQPQQQGPQLWHRMKQAPGAGAM
KFNIPKRPYVMTNQSFPPGEQPTGLAATPSSPAAAAPGGAQTRPQDWPQAMKEYVQRCFT
ACENEEDKDRTEKGLKEVLQKRLQDGSAYTIDWDREPLPELKAKQSRWEAVPTQRTLESS
VGRGGGTGGATRGRGGGARLGHYRNVFSQRSPSSSSSGSSSRSPSPSHNRHRDRNGQRHR
RSDSESQSDSSMSSDLRTQLPRRNQKGGRGRGGDRDRGRGGGERGRGRGGRGNRGRRNMD
DANSTVLGKKRKGGNAGLDFHDPHREAKKQSRAARFHNTKMRSEPLVLSINNLELPKEDL
SWDDCPIVGTCQEITKIYLRLTCAPDPATVRPVSVLRKSLLAVKAHWKTRQDYPYACEQM
KSIRQDLTVQGVRTEFTVEVYECHARIALEKGDHAEFNQCQMQLKALYKDNPSENIGEFT
AYRLLYYIFTKNSGDITTELVYLTAALRADECVSHALSLRAAWALGNFHRFFQLYRRAPR
MASYLIDKFVERERMIALRALFKTFRPDLPVEYVQSSLGFLCLDSCMAFLTGLGVTFFPS
DPSKIDCKISSACLAAS
NT seq 2574 nt   +upstreamnt  +downstreamnt
atggcggcgaatacgacccagacagctccagctgctaactggtcgtatggtgcagcagca
ggtccagagggccagacagtctcggaaaacccagagtgggagaaggccagacaggcactg
gcctccatcagcaagacccagagcgccaccaagaccgctcaggccaaccggaccacagca
caggctggtcagtttcagcctgcagttactgagtcgacagccatacagcagcagcaacag
cagcagtactaccaacagtggtaccaacagaatcagcagcaaccgtatcctggatacacc
tacccctacaattactactaccccatggcgccaggcccctatggtggtggtggctatcct
cctcagggccagtatggtgtacctccaggaccttacccctctcccaccactccaactgga
cagcctccatccctgcccgtgatggatgaccagtcctccagctacccctctcagccccaa
ccccctcctcctgctgcacctcaaccaccccccnagagccccaccagctctgagcagccc
ccaccccctcctcccccagccatccctcccactcccagctcccagtacccccttcctcca
gggcagaactcttacaaccccaacaaccccatgccctaccccaacaatgaccccaaccag
atgagaggttacaaccacaaccagggcaggcccagctatgggcagagctaccagactcag
aactcgtaccagcagcagcagaataacaaccaacaccagcaacaaggacagggtcagtat
ggaccaggagctgggagaggagaggccaacaaaaacaagaaccatcaacaacaacagcca
cagcaacaaggaccgcagctctggcaccgcatgaaacaggcacctggagcaggtgcgatg
aagttcaacattcccaagcgaccctacgtcatgaccaatcaaagtttccctcctggggaa
caacccactggattggctgctactccttcctccccagctgctgctgcacctggcggtgcc
cagacacggccccaggactggccccaggcgatgaaggagtatgttcagcgctgcttcaca
gcctgtgagaatgaggaggacaaggaccgcaccgaaaaggggctgaaggaggtcctacag
aaaagactacaggatgggtctgcctacaccatcgactgggaccgcgagcctctgcctgaa
ctgaaggccaagcagtctcgctgggaggctgtacccacccaaaggactctggagagttct
gtgggccgtggtggcggtacaggtggggctacgcgtggcaggggtggtggggccaggctg
ggacactacagaaacgtcttctcccagagaagcccctcatccagctcctcaggctcctcc
tctcgctccccctctccctcccacaaccgacacagggaccgcaatggccagagacacagg
cgcagtgactctgaatcccagtcggacagcagcatgtccagtgacctccgaacccagctt
ccccggcgcaaccagaaaggagggcgtggccgtgggggcgacagggaccgaggcagaggg
ggtggagagaggggacgaggaaggggcggaagaggcaacagaggacggagaaacatggat
gacgctaactccaccgtcctgggcaagaagaggaaaggtgggaacgccggcctggacttc
cacgacccccaccgggaggccaagaaacaaagccgtgcggcccgcttccacaacaccaag
atgcgctcagagcccctggtgctgtccatcaacaacctggagctgcccaaggaggacctg
agctgggatgactgccccatcgtgggcacctgccaagagatcaccaagatctacctgaga
ctcacctgtgcccccgaccctgccaccgtgcgtcccgtatctgtgctgaggaagtctctg
ttggctgtgaaggcccactggaagacccgtcaggactacccctacgcctgtgaacagatg
aagtccatacgacaggacctcacggttcaaggagttcgtacagagttcacagtggaagta
tacgagtgccatgcacgcattgctctggaaaagggcgaccacgcagagttcaaccagtgc
cagatgcagctgaaggccctgtataaggacaacccatcagaaaacataggggagttcact
gcttacagactactctactatatcttcactaaaaactctggagacatcacgactgagctg
gtgtacctgactgcggcgctgcgggcggatgagtgtgtgtcccacgcgctctccctccgc
gccgcctgggctctgggaaacttccaccggtttttccagctctaccggagagccccacgc
atggcatcctacctcatagacaagtttgtagagagggagaggatgatcgctctcagggcc
ttattcaaaacattcagaccagacttgccggtggagtatgtgcagtccagtctgggcttc
ctttgtttagactcttgcatggccttcctcacaggcctgggggtcaccttcttcccctct
gaccccagcaagatagactgcaagatcagctcagcctgtctggcagcctcctga

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