Oncorhynchus tshawytscha (Chinook salmon): 112234881
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Entry
112234881 CDS
T05605
Name
(RefSeq) uncharacterized protein LOC112234881 isoform X1
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112234881
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112234881
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112234881
Protein phosphatases and associated proteins [BR:
otw01009
]
HAD phosphatases
Fcp/Scp phosphatases
112234881
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112234881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
112234881
NCBI-ProteinID:
XP_024258965
UniProt:
A0A8C8FVC0
LinkDB
All DBs
Position
LG03:36575078..36633298
Genome browser
AA seq
1142 aa
AA seq
DB search
MPAEHCKVSELIETMESSEPSAQSAEPCIISDKINNSLDYTGHQKVNGQMDPAVQIVNHY
SMNGEHAEESKPFVHYNGHSGGYEQCINKPCEDYPVLHKHTNQYKSSELSKSFEECSQNC
ECFDFSKSSEHYANDCLASVFSQHCEHFTECFQSSEQCRSSDQHSKSFESSEPAENSEFL
AQCKISDFIPDISESNESKISFEHYTGICEYSEKYNHIDDPTEYNETTKPIDEDLKPSQP
TFQQIEICGLFDSEFCIILEPIHSSDLNMPSQHYAEQDSPNESRHVSEVHEPSEQTLLAE
QSNHQSADYDMPSGHCELQNTFYEQRETSVQCELSEQCNYCESYPCQHKSTNDKCYEPSS
SFYYEEDKSSECSSIETRSFESLIYDSINLDPLTDSAEFYEALVEEGAQDKSSSDIWESF
DNCTVVVECEESNADEDKPHSDAVVVEGFFDLFDKEDTYTFAQRQPYTSCFEGGGVHELF
FEQCKTHVSIMNEEETQMPCAKKGLEVFSQEVEEVDESYDACADDGQFNVDCTDDETSAS
GSFADEESCESCFEEATAYEVEFYEAFVAEDNAIEAEAYEPFVEEEELCIAENEAGDAQA
NGPLVDEDNTYDEHSAEEASHGSSSDVSSVEDDEASEGQNDQTYEPCFEEEETCDEEYQT
ICVAEDELYKQYAEDKAYGSYRPCDKDCDAYGSEHTQFSTEGEDNALCTEACEPSAEEHH
EYQSEANESNVNQEANGFCTEEDSHDQCNEEMDYDSTSETHVKGEVCTEERKNGAPCAEE
NESPESFEVITKDTALCTEGSKPAMPDGIEFNGDQTDSSTTSSEEIDERSKSSELCEQLN
TPYLSQNWEEHNGVSEHLQHAESEDLSEQVSEKTSLPLDGAELSKDSKDRELLAHPAEQT
EPSEQSELDEKMQLHEFFKIVASEQLSEESEEELSDDESFESCECEYCVPPREQVPAKPL
LPQIKSKDSGKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGTVHQVYVLKRPNVDEYL
KRMGELFECVLFTASLSKYADPVSDLLDKWGAFRHRLFRESCVFHQGNYVKDLSRLGRDL
NKVIIVDNSPASYIFHPDNAVPVTSWFEDMADTELLDLIPFFERLSQVEDVYDILKQQGI
AS
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaacactgcaaggtgtctgaactaattgaaaccatggaatcaagtgagcct
tctgcacaatctgctgaaccctgcatcatttcggacaaaataaataactctttggactat
actggacaccagaaggtcaatggacaaatggatcccgctgtgcagattgtcaatcattac
agcatgaatggagaacatgcagaagagagcaaaccttttgtgcattataatggacattct
ggggggtatgagcaatgcatcaacaagccttgtgaggactatcctgttctccacaagcac
actaatcagtataagtcttctgagttaagcaaatcatttgaagaatgttctcaaaattgt
gagtgctttgacttcagcaagtcctctgagcactatgctaatgactgtctagcttctgta
tttagccaacactgtgaacatttcacagaatgcttccagtcatctgaacaatgcaggtct
tctgatcaacactctaagtcctttgagtcaagcgaacctgctgagaactctgagttttta
gcgcaatgtaagatatctgacttcatacctgacatctctgaatccaatgaatcaaaaata
tcatttgagcactatactggaatttgtgagtattcagaaaaatacaatcatattgatgac
ccaacagaatataatgagactacaaagccaattgatgaggatttaaagccctctcagcca
acatttcaacaaattgaaatatgtgggctttttgactctgagttttgcataatattagaa
cctatacattcttcagatttgaacatgccttctcaacactatgctgaacaagattctccc
aatgaaagtagacatgtctctgaagttcatgaaccttctgagcaaactctgcttgctgaa
caaagcaatcatcaatctgctgactatgatatgccctctgggcactgtgaactgcaaaac
actttctatgagcaaagagagacaagtgtacagtgtgaactctctgagcaatgtaattat
tgtgagagctatccttgtcaacataaaagcacaaatgacaaatgctatgagcctagcagt
tcattttattatgaggaagacaagtcttctgagtgctcatccattgaaacaaggtctttt
gaatctttgatttatgacagtataaatttagacccattaactgattcagctgaattctat
gaagcgttggtggaagaaggagcacaggacaaatccagctcagatatatgggaatcattt
gataattgtacagttgtggtagaatgtgaggaaagcaatgctgatgaagacaaacctcac
tcggatgcagtcgttgttgagggattctttgacttatttgataaagaggatacttatact
tttgcccaaaggcaaccttatacctcctgttttgaagggggaggggtgcatgagttgttt
tttgaacaatgcaaaacccatgtgtccattatgaatgaggaagaaacacaaatgccctgt
gccaaaaaagggcttgaagtttttagtcaagaagtggaagaagttgatgaatcttatgat
gcttgtgctgatgatggacaatttaatgtagactgtactgatgatgagacatccgcctct
ggatcctttgcagatgaggaatcatgtgaatcttgttttgaagaagccacagcttatgaa
gttgagttttatgaagcctttgtagcagaagacaatgctattgaggctgaggcctatgag
ccctttgttgaggaagaggaactttgcattgctgaaaatgaagctggtgacgctcaggcc
aatggacccttagttgatgaggacaacacgtacgacgaacacagtgcagaggaagcatct
catggatcctcttctgacgtgtcttctgttgaagatgatgaagcatctgagggccaaaat
gatcaaacttatgaaccatgctttgaagaagaggaaacttgtgatgaagaataccaaaca
atatgcgtcgcagaagacgaattatacaaacaatatgctgaggacaaagcttatggatcc
tataggccgtgtgataaagattgcgatgcatatggcagtgaacatacacaattctctacc
gaaggggaagataatgcactatgcactgaggcctgtgaaccaagtgctgaagagcaccat
gaatatcaaagtgaagccaatgaatctaatgttaatcaagaagctaatggattctgtact
gaagaagactctcatgatcagtgtaatgaagaaatggattatgacagcacctctgagaca
catgtgaagggtgaagtctgcactgaagagagaaagaatggtgctccatgtgctgaggag
aatgaatcccctgaatcgtttgaggttataaccaaagacaccgcattatgcactgaagga
agcaaaccagctatgcctgatggtattgaattcaatggggatcaaacggattcttccaca
acctcttccgaagagatagatgagcgaagcaagtcatctgaattgtgtgagcagctaaac
acaccatatctgtctcagaactgggaggaacacaatggtgtctcagagcatctccaacac
gcagagtcagaggacctttcagagcaggtgtctgagaaaacaagcctccctcttgatggt
gctgaacttagtaaagactccaaagaccgcgagctacttgcacatcccgccgaacaaaca
gagccctctgaacaaagtgagctggatgagaaaatgcagttgcatgaattttttaagatt
gtggcctctgaacaactaagtgaggagtctgaggaggagctgagtgacgatgagtccttt
gagtcctgtgaatgcgagtactgcgtcccgcctagagaacaggtcccggcaaaacctctg
ctacctcaaatcaagtcaaaagactcagggaagatctgtgtggtgattgatttggatgaa
acattagtgcacagttcattcaagcctgtgaacaatgctgattttatcattccagtggaa
attgatggaacagttcaccaggtgtacgtgttgaagcgacccaatgtggatgagtatctc
aaaagaatgggggagttgtttgagtgtgttctgttcactgccagtttatccaagtatgcc
gatccagtctccgacctgctggataaatggggtgccttccgacaccgtctcttccgggag
tcctgcgtgttccaccaaggaaactatgttaaagacctgagtcggctgggcagggacctc
aacaaagtcatcattgtagacaactccccagcctcctacatcttccaccctgataatgct
gtccccgtaacatcctggttcgaagacatggccgacacagagctactagatctcatccca
ttcttcgagagactaagccaagtggaagatgtctacgatattctcaagcagcaggggatt
gcaagctag
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