Oncorhynchus tshawytscha (Chinook salmon): 112234946
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Entry
112234946 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: ras and Rab interactor 2
KO
K23687
Ras and Rab interactor 2/3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112234946
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112234946
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RA
SH2
RelB
SRP-alpha_N
Motif
Other DBs
NCBI-GeneID:
112234946
NCBI-ProteinID:
XP_042159647
LinkDB
All DBs
Position
LG02:69772243..69818454
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AA seq
1038 aa
AA seq
DB search
MAAMLPSTLPSTLPRPDCHMDRSGSFFKVSDGLTASDLSMSATLPRPDCHTDRRGSFFKL
IDTFALEIGELKQEMVQTSPTEDRDPYPMVLQGLEGELSGVYLQSSPCAGTSGERDSGYD
SLRRRMSVLDRLRHTHPVWLLLTLSDTEATHILLQQPPGVFLVRKSSSLQRKVLSLRVSD
DDASGGVGVCDFPVRESQYTFSLEGSGISFADLFRLVAFYCISRDVLPFTLNLPEAIAAS
KTQKDLEEVAQLGAGFWHSALGSLQRTTSPSRPPSQRPDRDSDNQGAERTQEKQSVTRHS
SVPPARPPSSSSSRLERSQSNRALCFVNPLFLQTHRRLEEDPPSSSSSPSPYVTHSPSPG
TTGGTPSAPVTDPKVNRKSRPPRPPPPHSLLIPTPRSLSQRRQAPPPPPLYPRSPRAACP
KPAAIVVTRQPLQPSSNQNLRPTPRPPMGARHSSHSKKMTSSAAIPVPHQHPQHPPPRRP
NKPDIDAHRCHIALDDETIAKALSRAKLPPCQTPAIPAPSIVGNGAGSPPSPPGKTPRRE
GQEGRLSDMSISTSSSDSLDYSHPPLSLPASPPLRLRHHLGNNKDSSDDEDLCDEEEEDY
GVSLENDLDQGLRPPFKAHRRGVGVKVALSFRKVSGVFSTFMTPERRAVRRIAELSRDKS
SYFGCLVQDYISFVQENKGCHTSGLDLLQTLRQFMTQMKAYLTQSSELDPPIESLIPEDQ
IDSVLEKAMHKCVLKPLKGVVEVALHDFQVSSGGWQQLRENLALAKTRRPQDLGVDGAVP
PDPMAIEKIRHKFHNMRKMYSPDKKVSLLLRVCKLIYTIMQDNSGRMYGADDFLPMLTYV
LAQCDMPQLDTEILYMMELLDPTLLHGEGGYYLTSAYGAMALIKNFQEEQAARVLSSEAR
DTLHQWHRRRTAQRTAPSVDDFQNYLRVALQEVNSGCTAKTLLVHPYSTTEEVCSLCAYK
FKVHDPENHSLFLITEATSQQLALDTHPQRIKAEIHSHPNSQPFHFVYRRVPNLNLCIPD
IPANQHNGNCLLPGQLDE
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggctgctatgctgccatctacgctgccatctacactgcccagaccagactgtcatatg
gacaggagtgggagcttctttaaggtctcagatggactcacagcctcagacctaagcatg
tctgctacgctgcccagaccagactgtcatacggacaggagaggaagcttctttaagctg
atagacacgtttgcgttggagataggggagctgaagcaagagatggtccagacctcccca
acagaggacagagacccataccctatggttctacaggggttggagggggagttgagcggg
gtttacctccagtcctcgccctgtgctggcaccagtggtgaaagggattctgggtacgac
tccctgcgtaggaggatgagcgtgctggacagactgaggcatacgcaccccgtgtggctc
ctgctcactctcagtgacacggaggccacacatatactgctgcagcagcctccaggggta
ttcctggtgaggaagtcatcctctcttcagaggaaagttctgtctctaagggtcagtgat
gatgacgcctcaggaggagtcggcgtctgtgacttccctgtcagagagagtcagtacacc
ttttctctggaaggatctgggatcagttttgcagacctgtttcgcctggtggccttctac
tgtatcagcagggatgtgcttcccttcaccctgaatctcccagaagccattgcagcctcc
aagactcagaaagacctggaggaggtggcccaactaggagcaggattctggcactctgct
ctaggcagcctgcaaaggacaacctctccctctcgccctccatcacagcgccctgacaga
gacagtgacaaccagggtgcagagaggacacaagagaaacagagtgtgactcgccacagc
agcgttcctccagctcgtcccccttcctcctcctcctctcgcctggagagaagccagtcc
aacagggctctttgcttcgtcaaccccctcttcctccagactcaccggcggcttgaggaa
gaccctccatcctcttcctcctctccttccccctacgtcacacactcccccagcccagga
actaccggtgggacgccttcggcccctgtcacggaccccaaagtgaacaggaagtcacgc
ccacctcggcccccgcctccccattccctcttaatcccgacccctcgttccctctcccag
cgccgccaagctccccctcccccacccctctaccccagaagcccaagagcagcatgcccg
aaacccgcagccattgttgtcaccaggcaaccactgcaaccttcatccaatcagaacctt
cgccccacccctcgccctcccatgggtgccaggcacagcagccattccaaaaagatgaca
agcagcgccgccatccctgtgccccaccaacaccctcagcaccctcctccccgacgcccc
aataaacctgacatcgacgcccaccggtgccacatcgctcttgatgacgaaactatcgcc
aaggctctgtcccgtgccaagcttcccccgtgccagacaccggccatacccgctccctcc
atagtgggaaatggtgctggtagcccccccagccctccgggtaagacccccaggcgagag
ggacaagaggggaggctgagcgacatgtccatctccacctcttcctcagattctctggac
tactcccaccctcccctctccctccccgccagcccccctctcagattacggcatcacctt
ggcaacaacaaggacagcagcgacgacgaagacctctgtgacgaagaagaggaagactac
ggtgtcagcctggagaacgacctggaccagggcctccgtcctcccttcaaagcccaccgg
agaggtgtcggggtcaaggttgcgctgagcttccggaaagtttctggagtcttcagcacg
ttcatgaccccagaaaggcgagccgtgaggaggatagcggagctctccagggacaagagt
tcctactttggatgcctggttcaggattatatcagttttgtacaggagaataaggggtgt
catacgtcaggcttagacctcctgcagaccctcagacagttcatgacccagatgaaggcc
tacctgacgcagagctccgaactggacccgcccatcgaatccctcatacccgaggatcag
atagactctgtcctggagaaggccatgcacaaatgtgtgttgaagccgctgaagggcgta
gtggaagtggccctgcacgacttccaggtgagcagtggaggctggcagcagctgagggag
aacctggccctggctaagacccggaggccccaggacctgggtgtggacggggccgtgccc
cctgaccccatggccatcgaaaagatccgccacaagttccacaacatgaggaagatgtac
tccccggataagaaggtgtcgctgctgctccgagtgtgtaaactcatctacaccatcatg
caggataactcagggaggatgtacggagcagatgacttcctaccgatgctgacctatgtc
ctggcccagtgtgacatgcctcagctggacactgagatcctctacatgatggagctgctg
gatcccacactgctacatggagagggtggctactacctgaccagtgcgtacggggccatg
gctctcatcaagaacttccaggaggaacaggcagccagggtcctcagctctgaggccaga
gacaccctgcaccagtggcaccgccgacgcaccgcccagcgcacggcaccctccgtggac
gacttccagaactacctgcgagtcgccttacaagaagtcaacagcggctgcacagccaaa
accctcctagtccacccgtactccaccaccgaagaagtatgctcgctctgcgcctacaag
ttcaaagttcatgaccccgagaaccactccctctttctcatcactgaggcaaccagtcag
cagctagccctggacacacacccccagcgaatcaaagcggagatacacagccacccaaac
tcgcaacccttccattttgtctaccgcagagtgcccaaccttaacctgtgtataccagat
atcccagctaaccagcacaatggcaactgcctactgcctggccaattggatgaatga
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integrated database retrieval system
