Oncorhynchus tshawytscha (Chinook salmon): 112234961
Help
Entry
112234961 CDS
T05605
Symbol
pgap1
Name
(RefSeq) GPI inositol-deacylase isoform X2
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
otw01100
Metabolic pathways
Module
otw_M00983
GPI-anchor remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
112234961 (pgap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112234961 (pgap1)
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
112234961 (pgap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PGAP1
PGAP1_3rd
PGAP1_TMD
Abhydrolase_6
PGAP1_2nd
Abhydrolase_1
Palm_thioest
Hydrolase_4
Lipase_3
Motif
Other DBs
NCBI-GeneID:
112234961
NCBI-ProteinID:
XP_024259064
LinkDB
All DBs
Position
LG03:37227383..37252580
Genome browser
AA seq
976 aa
AA seq
DB search
MRVATVAFYGCALGLLAMGLREMFSGFEENRCTMTYMFEYPEYRRIALPRRVARQYPAYG
LYLYGEGQYAQDTRGLKLTGAPVLFLPGNAGSYKQARSLGSVALRKAEALEGGVHLNVFT
IDFNEELVALYGGSLRRQTLFLHESIKAILRLYKDHEAPPHSVVLVGHSMGGVVARALFT
LPRFSPRLVSLIITQASPHQAPVLSLDAHLLEFYSAVRQRWVGRAEDLRNVTVLSVGGGY
RDYQVRSGLTALPCPQDDPSKLSLVVTAVPRTWVSTDHLSIVWCKELVLATVRAFFDLIE
PETGQFSDDPERRMAILNHHFIRHPVRVLGEQLEMPVSLSGSPKTWSEVNTLRLAYSAPK
EGQAKYFLFALSSRRRAYSHFYCRSNNLEMTSWVYGCTQMNGSMCVQAVDLSFGTELLPA
YKVLTLSLSELSSVSHLIVVASNLNGRQFTVECEWQRQESQTVSVPVPHVLSFGMSVSDV
TLNSTGLRHTIELQHFHQVYQAFRISVVSHCKVTKADRLPNVYIMKVPWFREDSVTTSSI
PSVTEISGMLHTSRPDNSTGVLLQLHTAPNCLYKVSVRTSFPRVLGQVLRFCGPVLPVYV
AVALLLACGGQMSSVVRMGRPLQMSHAVARSLQPHKVDLPVYLLHLLLRYSWFQDGWSTL
HLPPLDALPATSPDGMTQEGLPLNEDWPRLLSPLLYVLGAAIAFWGSVLLRLFLRLLSLL
LAPLHRPSVSRDCGTLRRRTQLLLILCLSVLGWASCGALSITATFLLHLYRVLRLQMTER
SLSHMLNLAPDKQTDKEKGTGEKEKGTGEKEKGTGEKEKGTGEKEKGTGEKERGTGNSEA
LDSKPKECNGAPLLSDSVLQDVRDDLQLHVSLSALLTLPVMLCAPSLIHWTRNLRYSVAR
LDPDPCWPHSMPLFIASLLLINCNTLTLSYSKTLPITSRLLLPLSVAMVSFSPLHLYRVN
YFVSAALVPLAVSCLF
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcgccactgtggccttttacgggtgtgcactgggtcttctggcgatgggcctg
cgagaaatgttttcgggatttgaagagaataggtgcacaatgacctatatgttcgagtac
cccgagtaccggcgtattgccctgccccgacgcgtggcccgccagtacccagcgtatggg
ctttacctgtacggagagggccagtacgctcaggacactcgcggactaaaactaaccggg
gcccctgttcttttcctacctggaaacgcaggcagctacaaacaagctcgctccctgggt
tcggtggctctgaggaaggctgaggccctggaaggaggggtccacctcaacgtgttcacc
atcgacttcaacgaggagcttgtggccctgtatggaggcagcctgcgccggcagactctc
ttcctacacgagagcatcaaggccatcctgcgcctctacaaggatcatgaagccccccct
catagtgtggtgttggtgggtcactccatggggggagtggtggcccgagccctcttcacc
ctaccccgcttcagccctcgccttgtcagcctcatcatcacccaggcctcccctcaccag
gcccccgtgctgtccctcgacgcacacctactggagttctactctgctgtgagacagcgc
tgggtgggtcgagcggaagacctgcgcaacgtgacagttctctccgtggggggtggttac
cgtgactaccaggtgcgctccggcctcacggccctgccctgcccccaggacgacccaagc
aagctgtctctggtggttactgctgttcctaggacctgggtgtccacggaccacctgtcc
attgtttggtgcaaagagctggttctggctactgtgcgggcattctttgacctcattgaa
cctgaaacgggacagttttcagacgatccagagaggagaatggccattctgaaccatcat
tttatcagacaccctgtacgtgtgctgggtgagcagctagagatgcccgtttccctctca
gggtctcctaaaacgtggagcgaggtgaacacactccgtctggcgtacagtgctcccaaa
gaaggacaagccaagtatttcttgtttgccctctccagtcgcaggagagcctacagccac
ttctactgtcgcagcaacaacctggaaatgactagctgggtttacggttgtacacagatg
aacggatccatgtgtgtgcaggcagtggatctgtcttttggaacagaacttctcccagcc
tacaaggttctgactctgagcctcagtgagctgtcctctgtctctcacctcattgtggtt
gcctccaacctcaacggtagacagttcacagtggagtgtgagtggcagagacaggagtct
cagaccgtctctgtgccagtaccacacgttctctccttcggcatgagtgttagtgacgtc
actctcaactccaccggacttcggcacaccattgagctgcagcactttcatcaggtctat
caggctttcagaatttcagtcgtaagccactgcaaagtaaccaaagcagacagactgccc
aatgtctacataatgaaggtgccgtggtttagggaggactccgttaccacatccagtatt
ccctctgtaacagagatatcgggaatgctccacacgagtcgtcctgacaactccactggt
gtcctgttgcagctccacactgcccccaactgcctctataaggtatctgtgagaacttca
tttcccagggtgcttggacaggtgctgaggttctgtgggcctgtgttgccggtgtacgtg
gctgtagcgctcctactggcctgtggggggcagatgtcctctgtcgtgaggatggggcgc
cccctacagatgagccatgccgtggccagatccctgcagccccacaaggtggaccttccc
gtctacctgctgcatctgctgctcaggtatagctggttccaggatggttggtccactctt
catctcccgccgttagatgctctccccgccacctccccagatggtatgacacaggagggc
ttgcccctaaacgaagactggccacgcctcctgtcccccctgctgtatgttttgggagca
gccattgccttctggggcagcgtgctgctccgcctctttctaaggctgctttcgttgcta
ttggccccgcttcacaggccttctgtgtctcgggactgcggcaccctgcgtaggcggact
cagctgctcctcatcctgtgtctgagcgtgttaggatgggcttcctgtggagccctgtca
atcacagccaccttcctgctgcatctctaccgagttctaaggctacagatgacagagagg
tctctgagtcatatgctgaacctggcgcccgataaacaaaccgacaaagagaaaggcact
ggggaaaaagagaaaggcactggggaaaaagagaaaggcactggggaaaaagagaaaggc
actggggaaaaagagaaaggcactggggaaaaagagagaggcaccgggaacagtgaggcc
ctggacagcaaacctaaagaatgtaacggcgcccccctgctttcggactcggtactgcag
gatgtgagagatgacctgcagctgcacgtcagcctgtctgctctcctcactctaccagtc
atgctctgtgccccatcactgatccactggacccgcaacctcagatattctgttgctcgt
ttggatcctgacccttgctggccccactccatgcctctcttcatcgcctctctgctgctc
atcaactgtaacacactcactctcagctacagtaaaaccctgcctatcacatcccgcctg
ctgttgcctctctccgttgccatggtgtctttctccccactccatctataccgtgtaaac
tactttgtgtctgcagccctggttccgctggctgtttcctgtctcttctga
DBGET
integrated database retrieval system