Oncorhynchus tshawytscha (Chinook salmon): 112235031
Help
Entry
112235031 CDS
T05605
Name
(RefSeq) caskin-2 isoform X1
KO
K21952
CASK-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235031
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
112235031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Caskin-Pro-rich
Ank_4
Caskin-tail
Ank_5
SAM_2
Ank_3
Caskin1-CID
SH3_2
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
112235031
NCBI-ProteinID:
XP_042183601
LinkDB
All DBs
Position
LG09:complement(82540445..82627320)
Genome browser
AA seq
1378 aa
AA seq
DB search
MGKEQDLLQAVKTGDLPSTQKLLAKLKASRNKLLGSTKRLNVNYQDGDGFSALHHAALTG
TTDLLSVLLEAQATVDIKDRNGMRPLHYAAWQGKADSVLMLLRAGAGVNGVSQDGHIPLH
LAAQYGHYDVSEMLLQHQSNPCLINKTKKTPLDLACEFGRVKVAQLLLSSNMVVALLEGN
SKEPADSGFNTPLHLAARNGHKDIIRLLLKAGIDINRTTKAGTALHEAALYGKTEVVRQL
LEAGIDVNIRNTYNQTALDIVNQFTTSHASKDIKQLLRDATGVLQVRALKDYWNIHDPTA
LNIRAGDVIMVLEQHMDGRWKGHIHDSQRGTDRVGYFPPNIVEVISRRSGGTLSRHASLP
TQRHQLLSRAPLSSSLSSAPQTDDSYTLYTPNNPHMVLPHAIGLSANPGRPPSSLSQPGC
PLEDIWVLRNSHTAAGDRNSVGSTGSVGSTRSAGSGQSTESNTALNGQHHQTTALPDTAK
PAPSAGDSGQPVPNKQPDLTAVVLGAPRRPMVNILRPGEQQFVSPQFVRPQQLLEGKDAE
AIYQWLSDFQLEQYTGNFITAGYDVPTISRMTPEDLTAIGVTKPGHRKKISIEIGNLSIP
EWLPEYIPADLGEWLSTIGLPQYQRKLSENGYDSISIVRDLTWEDLQEIGITKLGHQKKM
MLAVKKLCDIQRAILAAESGQGTLRRKPPGALHLVTIEPPDSASDCPSPHTPKMLTFQDS
ELSAELQIAMSSHYQEGPAIKSAVGMSRSQESIDARSRGSGRSQDPPTASITPHSRSQES
LGGSSTSTSHSADSSPAKERNIPEGWDQRSILQQQLPKQVPLGAATVFQYPTIPAKPKGP
GSHSLGSSPQGSPAQRGFSYLHSHCGSTDVGHGSPTKPLAHTYHAMTLAPPKKRSQSLTR
YALSDGEPDEEDDDLAPPSSTLESYATLTRRPGRSQLAGMQTTPVKYGTVGRSQSFAVRA
RKKGPPPAPPKRLSSVSSSPSVGSTENMAPSPGGVETDSPGSVRSIAACLEASTEGKSLS
RPRLDLLQPEPPLPSLNPSGLEPREASAGMRRRVQSECAPAQTDIPDHYPDPERGVKSDS
EEEEPKAPGLDGSSSPHNSSSECIPFAEEGNLTIKQRPKVGGPPRAESTVEIPADKNRPT
KTALEVPEFNLKESDTVKRRYKPKDHAGSSPTSDSEGQIGSDSSPGSRPQSQSCEEVSLV
SLRISEASLEGLENLAVTGTPLKPPVSPKPHSSHGPPVTAPKPSRHSLAAATAIVPPTMT
VNVVQSLAFSAPPSPTPSRCPPAPGLQCQAAQTGKPQVCVVGPGPGVESGPGLEVVQQQR
LEQTSTSLEAALQAVERKLTQEDSTDGGANTVKSAGNILDDIGNMFDDLADQLDAMLD
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagcaggacctactgcaggccgtcaagaccggagacctgccctccactcag
aaactactggccaagctcaaagccagccgaaacaagttgttgggctccacgaagagactg
aacgtcaactaccaggatggagatgggttctcagctctccaccatgctgctctgaccgga
actacagacctgctgtctgtgctgctggaggcccaggccaccgtggacatcaaggacagg
aacggtatgcgtccgctccactatgcagcatggcagggcaaggctgactctgtccttatg
ctgctgcgggccggagctggagtcaatggggtctcacaggatggacacatccccctgcac
ctggccgcacagtacggacactatgacgtgtctgagatgctgctgcagcatcagtccaac
ccctgtctgatcaacaaaaccaagaagacccccctagacctggcctgtgagttcggtaga
gtcaaggttgctcagctgttgttgagcagtaacatggtggtggctctgttagagggtaat
agtaaggaacctgcagactcaggctttaacactccgctgcacctcgccgcacgcaacgga
cacaaggacatcatccggttgctgctgaaagcgggcatcgacatcaacaggaccactaag
gctggcactgccctgcacgaggctgccctctacggcaagacggaggtggtcagacagctg
ctagaggctggtatagacgtgaacatccgtaacacgtacaaccagacagccctggacatc
gtgaaccagttcaccacctctcacgccagcaaggatatcaagcagctcctacgagatgct
acaggtgtcctgcaggtgagagctctgaaagactactggaacatccacgaccccactgct
ctcaacatccgggccggggatgtcatcatggtcctagagcagcacatggacgggcgctgg
aaagggcacatccacgacagccagaggggcaccgaccgggttggctacttccccccgaac
attgtggaggtcatcagcagacgctcagggggcaccctgtcccggcacgcctctctgccc
acccagcgccaccagctcctctccagagcccccctctcctccagcctgagctcagccccc
cagaccgacgactcctacacactgtacacccccaacaatccccacatggtactcccccac
gccatcggcctcagcgccaacccaggtcggcctcccagcagcctctctcagcctggttgt
cccctggaggacatctgggtgctcaggaactcacacaccgcggcaggtgacaggaacagt
gtagggagtacgggcagtgtgggcagcacccgtagtgctgggagtggacagagcacagag
agtaacactgccctcaacggacaacaccaccagaccaccgcactcccagacacagccaaa
ccagcgccctctgctggtgactcagggcaaccagtccccaataaacagcctgacctgact
gcagtggttctgggtgctcctcggaggccgatggtgaacatactgagaccaggggaacag
cagtttgtctccccacagtttgtacgtcctcagcagctactggagggcaaggatgcagag
gccatctaccagtggctgagtgacttccagttggagcagtacactgggaacttcatcacg
gccggctacgacgtccccaccatcagcaggatgaccccagaggacctgacggccatcggc
gtcaccaagccaggccaccgcaagaagatctcaatcgagataggaaacctcagcatcccc
gagtggctgcctgaatacatcccggcagacctgggggagtggctgagtaccataggcctg
cctcagtaccaaaggaagctgtcagagaatggctatgactccatcagcatcgtacgggac
ctgacctgggaggacctgcaggagataggcatcaccaagctgggccaccagaagaagatg
atgctggccgtgaagaagctgtgtgacatccagagggccatcctggctgcagaatctggc
cagggcacgttgcgccgcaagccccctggagcccttcacctggtcaccatcgagccccct
gacagcgcctccgactgcccctcgccccacacccccaagatgctgaccttccaggacagc
gagctgagcgctgagctgcagatagccatgtccagccactaccaggagggcccggccatc
aagagtgccgtgggcatgtctcggagccaagagagcatcgacgcccggtccaggggctca
gggcgctcccaggacccccccacggcctccatcactccccacagccgctcacaggagagc
ctaggcggcagcagtacctccaccagccacagtgctgacagcagccctgccaaggagagg
aacattccagaaggctgggaccagaggtccatactacagcagcagcttcccaagcaggtc
cccctgggggcagccaccgtgttccagtacccaaccatcccagccaagcctaaaggccct
gggtctcactccctaggctcctctccccagggctccccggcccagaggggcttcagctac
ctccactcccactgtggcagcaccgacgtgggccacggctcgcccaccaagcccttggca
cacacctaccatgccatgaccctggccccgcctaagaagcgcagccagagcctgacacgc
tatgccctgtcagacggcgaaccagacgaagaggatgacgacctggctccaccctctagc
accctagagtcctacgccaccctgacccgccggcccggacgcagccagctggcaggcatg
cagaccacacccgtaaagtacggcactgtgggacgtagccagtcctttgccgtgcgcgct
cgtaaaaagggtccccctccagccccgcccaagagactgagctcggtgagcagtagcccc
agcgttgggtccactgagaatatggcgccctctcctgggggggtggagacagacagccca
gggagcgtgaggagcatcgcagcctgtctggaggcctccactgaggggaagagcctgtcc
aggcccaggctggacctcctccaaccagagcctcccctccccagcctcaacccctcagga
ctggagcccagagaggcctctgcaggaatgaggaggagggtgcagagcgaatgtgctcca
gcccaaaccgacatcccagaccattacccagacccagagcgaggggtgaagtcagactct
gaggaggaggaacctaaggcaccgggtttggatggctcctcatcccctcacaatagctcc
agcgagtgtatccccttcgccgaggaaggcaacctcaccatcaagcagaggcccaaggtg
ggagggccgcccagggcagagagcactgtggagatcccggcagacaagaaccggcccacc
aagacagccctggaggtgcctgagtttaacctgaaggagtcagacactgtgaagcggaga
tacaagcctaaagaccatgctggcagctctcccaccagtgacagtgagggccagataggg
tcagactccagtccaggcagcaggccccagtcccagagctgtgaggaggtgagtctggtc
agtctcaggatcagtgaggccagtctggaggggctggagaacctagcagtgacgggcaca
cccctcaaaccccccgtctcccccaagcctcacagctcccacggaccccccgtcacagcc
ccaaaaccgtcccgacacagtctggctgctgctacagccatagtgccgcccactatgact
gtcaacgtggtacaaagtcttgccttctcagccccaccatcacccacacccagccggtgt
cccccagccccagggcttcagtgccaggcagcccagacaggcaagccccaggtctgtgtg
gtcggcccaggcccaggggtagagtctggcccggggttagaggtggtgcagcagcagagg
ctggagcagaccagcacctctctggaggcagcactgcaggctgtggagagaaaactcacc
caggaggacagcactgacggtggggctaacacagtgaagtcagcgggcaacattctggat
gacattggcaacatgtttgatgaccttgctgaccagctagatgccatgctggactaa
DBGET
integrated database retrieval system
