Oncorhynchus tshawytscha (Chinook salmon): 112235089
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Entry
112235089 CDS
T05605
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112235089
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
Patched domain-containing proteins
112235089
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GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
112235089
NCBI-ProteinID:
XP_024259249
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Position
LG16:complement(7069496..7075747)
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AA seq
858 aa
AA seq
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MAGCNTDCVEKPIARGFEILGRFVGRHHWWFFILPMLISAGLGGGFYFLADREANGIEEM
FTPMDGPAKDERRVVKEYFPQNDSDFSRLRLYTEGTFASLIIVTPSANILTNPAFTKIIA
MDREVKAIEVGTFNFSNLCVQKGDVCVSNSIFDIVKTPNVTTIDYPYHGNIFIASEIGGV
KLKTGSTEIESAKAIRLFYFLKEDNQTVNTMWLQKFIETASTMQKEEDMTISYFTSISRD
EEFEKSSDSIIPLFSLTYALAITFSIISCIRLDCVRNKVWVATFGVLSAGMAVLSSFGLL
LYCGMPFAMTVATAPFLILGIGVDDMFIMISCWQQTQVHDNVEDRVAATYKEAAVSITIT
TLTDALAFYIGLLTPFGSVQSFCMYTGTAVLFCYLYNITFFGAFLALNGRREKSNRHWLT
CMKVSEPEENSEKYNICSVGGAYDHETGKEEPMPVNNFFKTYYGPFLTNNWTKGFVILLY
AVYLGSSIYGCLQIQEGIDLKNLAADSSYVGSYYDNEDEFFSEYGPNVMVVVTDSAFKYW
DESARNILDSCLQNFEGLPMVSQNRTISWLNEYLTFGKMTHLNLSEENTFKSNLSAFLER
SDFIQDVNFTDNTIYASRVFIQTVNVSTAVDEKNMLNELRETASDCSVKLVVYHPAFIYF
DQYAVIVSNTIQNIVVATLAMLVISLLLIPNPICSLWVTFAIASVIVGVAGFMAFWDVNL
DSVSMINLVICIGFSVDFSAHISYAFVSSDKGTANEKAIDAVYHLGYPIIQGAVSTILGV
VALSAAESYIFRTFFKIMFLVILFGAVHGIVFIPVFLSFFGICSAKVGDEEDAGDNPQDN
TYQLKQKMNDNTVCENNF
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtgcaacacagactgcgttgagaaaccgatagctagaggatttgaaatactt
ggacgttttgttggtagacaccactggtggttttttattctccccatgttgatttctgcg
ggtcttggcggaggattttacttccttgcggacagagaagctaacggcattgaagagatg
ttcacacctatggacggaccagcgaaagacgaacggcgagtagtaaaagaatactttcca
cagaatgacagcgacttctcacgtttgcgtctctataccgaagggacttttgcatctctc
ataattgttacgccctcagcaaatatcctcacaaatcctgcttttacaaaaattattgct
atggatagggaagtgaaagccattgaagtaggaacatttaatttctcaaacctttgtgtt
cagaaaggtgatgtgtgcgtgtcaaattcaatctttgatattgtaaaaactcccaatgtt
accactattgattacccatatcatggcaacattttcatcgcatctgaaattggtggtgtg
aaactgaaaactggatcaactgaaattgaaagcgcaaaggcaattcgacttttttacttc
ttaaaagaagacaaccagactgtaaatacgatgtggctgcagaagttcatagagactgcg
tcgacgatgcaaaaagaagaagacatgaccatatcgtattttacatcaatatcaagagat
gaagagtttgagaagagctctgactcaatcattcctctcttctcgttgacctatgccctg
gccatcaccttttcaatcatatcttgtataaggttggactgtgttaggaacaaggtgtgg
gtggcgacctttggtgtcctctcagctggtatggcggtgttgtccagttttgggttgttg
ctgtactgtgggatgcccttcgctatgactgtggcaacagctccattcctgattctggga
attggtgttgacgacatgttcatcatgatttcttgttggcagcagactcaagttcatgac
aacgtagaggaccgtgtggcagctacatacaaagaggcagctgtctctatcaccatcaca
acactaactgatgccctggccttctatattggtctgttaactccctttggttctgtacag
tccttttgtatgtatactggcacagctgtgctgttctgctacttgtacaacatcaccttc
tttggtgcatttctggcactgaatggaagacgtgaaaagagcaacagacactggctgacc
tgcatgaaggtttcagaaccagaggagaattctgaaaagtacaatatctgctctgtaggg
ggagcttatgatcatgaaacaggaaaagaggaaccaatgccagttaacaacttctttaag
acgtactatggtccatttctaacaaataattggaccaaggggtttgtgatcctgctctat
gctgtatatttgggctcaagcatctatggttgcttacaaatccaagagggcatagacctt
aaaaatctagcagctgatagctcatatgtaggtagctattatgataatgaggacgaattc
ttttcagagtatggcccaaatgttatggttgttgtgacagacagtgcgtttaaatattgg
gacgaaagtgctcggaatattcttgactcctgccttcaaaactttgaaggtctaccaatg
gtttctcaaaacaggaccatatcttggctcaatgaatatcttacatttggaaagatgacc
catttgaatctaagtgaggaaaatacattcaaaagtaatttgtctgcatttctcgagagg
tctgatttcatacaagatgtgaattttacagacaacacaatatatgcttcacgtgtgttc
attcagacagtcaacgtcagtacagctgttgatgaaaagaacatgttgaacgagcttcgg
gagacagctagtgattgttcagtaaagttggttgtttaccatcctgctttcatatacttt
gaccagtatgcagtcattgttagtaacaccatccaaaacattgtagttgccactcttgcc
atgctggtgatctccctcctgttgattcccaacccaatatgttctctttgggtgaccttt
gccattgcctctgtcatagtgggcgttgctggtttcatggcgttttgggacgtcaatctc
gactctgtatccatgatcaatcttgtcatctgcatcggtttctcagtggacttttccgct
cacatttcctatgccttcgtctctagcgataagggaactgctaacgagaaggctatagat
gctgtctatcacttgggctatcctatcatacagggagctgtgtctactatcttaggagtg
gtggctctgtctgcagctgagagctacatcttcagaaccttctttaagatcatgttcctg
gtcattttgtttggggccgtccatggtatagtgtttattccagtgtttttgtctttcttt
ggaatctgcagcgctaaagttggcgatgaagaagatgcaggtgataaccctcaagataat
acctatcaattgaaacagaaaatgaatgataatactgtttgtgaaaacaatttctga
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