Oncorhynchus tshawytscha (Chinook salmon): 112235090
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Entry
112235090 CDS
T05605
Name
(RefSeq) highly reducing polyketide synthase cm3B-like
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
PS-DH
KAsynt_C_assoc
PP-binding
adh_short
PKS_DH_N
CurL-like_PKS_C
ACP_SdgA_C
Thiolase_N
ADH_N
adh_short_C2
RhiE-like_linker
SAT
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
112235090
NCBI-ProteinID:
XP_024259250
LinkDB
All DBs
Position
LG16:7031004..7052341
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AA seq
2098 aa
AA seq
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MGDAEEDIAVVGIGCNFPGGEGLDNFWKVLLEGKNCALQIPDERFVSSHWYDPNDNKVGK
SRTAKAAFMDGFNEFDHKFFGITETEVEQMDPQQKLLLQCAYRALENAGMPMEKASGTKT
GVFIGLMNRDYEQSVGFMNPNLINHCTGTGLSMSIAANRVSYIFNFTGPSLSIDCACSSS
LVALHLACQAIRQGDCEMALCGGVNSIIQPLAFVALSKAKMISPEGTSKPFSSRADGYGR
GEGCGIILLKPLKKALKENYHVWGIISNTAVNQDGRTVTPITKPSMVQQEELLRGIYSQS
DLLSVQYIEAHGTGTPVGDPIEAGSISKVIAKARPPGSETLLIGSVKGNIGHTESAAGVA
GLIKVLLMMKHETIVPSLFYSEDSSSIDAKALNVKIPTKAEKWRDSIVRVAGINNFGFGG
TNAHAIVKQHKQSNVPQKSGRKSHNLFVLSASSEKSMSMMMEDTIQQIDRDNKGDLEALA
YTSACRRSHLKHRYRKAFRAPSLADLKDQLTSAMNKVTTPSYSDPRLVFVFCGNGVTYQG
MCQQLLKHELVFREKISQIEKLFQKFNNMSIIERLESESESKDLSNPDVVQPLLFATQVG
IASLFKHWGIKPDAILGHSIGEVAAAHCSGLLSLEDAVKVIYFRSTLQNTVTGGKMLVVS
NMVVSEVLNLLPSYSNKISLAAFNSPQSCTLSGDAEAIDSLHRKLSSSVKSKNLFLHVLD
VPAAYHSQMMDPILSQLEDSIGSLQVNDVETELFSTVTGKEVEQPDFSTGKYWARNIRET
VSFEQAVRSATKGKKNVVFVEIGPRRALQRNIQETLGNDTMVLSSVQPDKDHETMLNTVS
KLFELGVQVDWDQFYRGREASPTSFPRYQFDSTRRDVIMSASKIHHTSGNHPVLTHTASD
SNTFSCDLSSDSVSYLHEHKHNGVAIIPGAFYTELGLAAFMASAKPKVPLNTLQVSISFQ
SPYVFTQNAPEMKVQLEPAVDETHFKIYSPSTNHASGTITCKRGQLAEEQNISLSSIYKR
CNSVLNSEKFYTEIALGGFQYGTVFQNTGDIHYGKEFKEAFSVVTVPEELLSQLHEYCIH
PVVLDFLMQLAPVTVAYGLSSRPRFPVKIGSLTVFEPLQEEMIVYLKAIDEGVDHYEVCG
CFTDKEGRVLVELKHVVIKYLGSRSHVVEEYFFHNEFNVCEDIISSNTSEAPKALVFSDQ
VGLPKAMQPHLSSQSRYISFTQSKEVLSHGFPTLLANLNITDLNKHFQEVLFVWGQEDVT
SLRTEYVLESMISCCEMLRKIVLSLRAMQFTNSIRVITYRSAEDTVDHISAGFVLSGMTR
SCAAEMEKLSFQLIDINSVSTEDIIALSQVLKSYPCKSYPELVVKGGLILKPDIVHTPIG
SIESTEGRIFSSMTEPCIFQTNDPCRMTSLSAIPCDADNTNIHKKSVKIQLSKIGVHSSD
YYPVSVSELNYGQTMYWNNHTSQNHQLLALDFSGTVTAVGKDVNTLKVGDDVVSCYPIAA
SSKIVIPEAACYKTKRLTFLKEAPCVSYFVLAWEIWHRLLPTIKQRRRLSIISSVPDSSL
LKVLIQTANKSRWNAIVGTQCSGMFADAILLLPPFDKSLLAEVSNCPDVRHVVIVCESQS
HRLLEQSVFLNVNDSVHIQTLQMSSILQKGSLIAKRPQIYNWLKSMHLGISLETSTLQRM
SSGSIDFLSVESYFSSKTLSVVALGKDDSKGTLSNIQLLPKPTQLFQKKSVYIVTGGLSG
LGFETVKFLAQKGGEYIVILSRSSPTPDIQQEIVILERQWSACIVWMGCDVSVSEHVLRV
IGLIGQKFPSCPIKGVFHSAVVLHDGLIENLDKSHFEKVLKPKVNGALNLHHATKHCKLD
YFVCYSSISSFLGNASQTNYAAANSFLDYFCHYRRNIGLSGQSINWGALNLGLLLNKDHL
HRFLETRGLMVMDVTEIHESLEQCLLLNKPQQVVCRFHIKNMMSNVLSQNASLTVRITAL
VDEAVQKLKFQKSQSEHTSVSSSPSEYIRSVLSQTIGVDKHELDDDSPLSALGIDSMLAM
TLQNLIFQDRGVNVPLVTLLDPNRTLSTLVSMLMESTEGESENDDQKEDMIDDMLTRL
NT seq
6297 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgctgaggaggacattgctgttgtcggcattggctgtaatttcccaggagga
gaggggcttgacaatttctggaaggttctgttggaggggaagaactgtgctttacagatt
cctgatgaaaggtttgtctcttcccactggtatgaccccaatgacaacaaagttggaaag
tcgcgcacagctaaggctgcattcatggatgggtttaatgagtttgatcacaaattcttt
ggcatcactgaaacagaagtggaacaaatggacccccagcaaaaactccttcttcagtgt
gcatacagggctctggagaatgctgggatgccaatggagaaggccagtgggaccaagaca
ggagtatttatagggcttatgaacagagattatgaacaatctgttggatttatgaaccca
aatttaatcaaccactgcaccggtaccggactttctatgagtatagcagccaacagagtc
tcatacatcttcaacttcactggaccctcactctccattgactgtgcctgctcttcatcc
cttgtggctcttcatttagcttgtcaagccataagacaaggtgactgcgagatggctctt
tgtggtggcgtcaattctatcatacagccgctagcctttgtcgcgctcagcaaggcaaag
atgatttcacctgaaggcaccagcaaacctttctccagcagagcagatggctatggcaga
ggagagggctgtgggattattctgctgaagccactaaaaaaagctctcaaggagaattac
catgtatggggcatcataagcaacactgctgttaaccaagatggccgcacagtcactcca
atcaccaagccatccatggtccagcaagaggagctgctgcgtggaatctattcacagtct
gacctgttatcggtccagtacatagaggctcatgggactggaactccagtgggagatccc
atagaagcaggcagcatctccaaagtcattgccaaagccagacctccaggttcagagaca
ctcctcatcggctctgtgaaaggcaacatcggacacacagaatctgcagctggagtggca
ggtctaatcaaggtactcctaatgatgaaacatgaaaccattgtcccttcactgttctac
tctgaggacagttccagtatagatgctaaagctttaaatgtaaagattcctactaaagca
gaaaagtggagagattctattgtaagagttgcaggaataaacaattttggttttggagga
acaaatgcacatgctattgtcaaacaacacaagcagtcaaatgttcctcaaaaaagtggt
aggaaatcacacaatttatttgtcctctctgccagttctgaaaagtctatgagtatgatg
atggaggacacaattcaacagatagacagagacaacaaaggtgatctagaagctcttgcg
tacacatctgcatgtagaagaagccacttgaaacatcgatatcggaaagcattcagagct
ccctctctggctgaccttaaagatcaactcacatctgccatgaataaggtaacaacgcca
tcttactcagatcccaggctagtatttgtcttctgtgggaacggtgtaacctatcaaggc
atgtgccagcagctcttgaaacatgagcttgtgttcagagagaagatcagccaaattgag
aagcttttccagaagttcaataacatgagtatcatagagagacttgagagtgaatcagag
agtaaagatctttcaaacccagatgttgtccagcccctcctctttgccactcaggttggc
atagccagtctcttcaagcactggggcatcaaacctgatgccattcttggccactctata
ggagaggttgctgctgcccactgctctggtctgttgtcccttgaggatgcagtgaaggtg
atctacttccgcagtactctgcagaatacggtcacaggagggaaaatgcttgtggtcagt
aacatggtcgtatcagaggtcttgaacctccttccctcttactcaaataagatttccttg
gctgccttcaacagcccgcagtcctgcacgctctcaggtgatgcagaggctatagacagt
ctccatcgaaagctgagcagctcagtcaagagtaagaatctgttcctccatgttttggat
gtccctgctgcataccacagccagatgatggatcccatcctgtctcaactagaggacagt
attggctctttacaagtcaatgatgttgagacagaattgttctccacagtaacaggaaag
gaggtagagcagccagacttcagcacaggcaaatactgggccaggaacatacgagagaca
gtttcatttgaacaggcagtgagatctgcaaccaaagggaaaaagaatgtagtctttgtg
gagattggccctagaagggctctacaaagaaacatccaggagactcttggaaatgacacc
atggttctgtcctcagtgcagccagataaagatcatgagacaatgctgaatactgtgtcc
aaactgtttgagttgggggttcaggtagactgggatcagttctacagaggccgtgaggct
tcaccaacatctttcccaaggtatcagtttgattctactcggagagatgttatcatgtct
gcatcaaagatacatcatacatcaggtaatcatcctgtgctaactcatacagctagcgat
agcaataccttcagttgtgatctgtcttctgactcagtatcctacctgcatgagcataaa
cacaatggtgttgccataatccctggtgccttctatactgagttgggtttggctgccttc
atggccagtgccaaaccaaaggttccactcaacacactgcaagtcagtatcagttttcag
agtccctatgttttcacacagaatgcaccagagatgaaagtgcaacttgaaccagcagtg
gatgagacccattttaagatatattctccctccacaaaccatgcatcaggcacaataacg
tgcaagcgaggacagctagctgaagaacagaacatttcgctaagctctatctacaaaaga
tgcaattcagtgttgaattctgaaaagttctacactgaaattgctctgggtgggtttcag
tatggcactgttttccagaacacgggggatatacactatggtaaagagtttaaggaggct
ttttcagttgtcacagttccagaagaattgctgtctcagttgcatgaatactgcattcac
cccgtagtgttagacttcctgatgcaacttgctcctgttacagtagcatatggactctct
tcaaggcccaggtttcctgtcaaaataggcagcttgacagtgtttgaacctctgcaagag
gaaatgattgtgtatctgaaagcaattgatgaaggtgttgatcactatgaagtatgtggt
tgctttacagacaaagagggaagagttttggttgagcttaagcatgtggtgattaaatat
cttgggagccgctctcatgttgtggaagaatacttcttccacaatgaattcaatgtctgt
gaggatatcatctcctctaataccagcgaggcaccaaaggccttggtattttccgaccag
gtaggccttccaaaagccatgcaaccacacttaagttcacagtctagatacatctccttc
acacaatctaaggaggtcttgagccatggatttcctacactcctggcaaaccttaatatc
acagatctcaacaaacacttccaggaagtcttatttgtgtggggtcaggaagatgttact
tcactgagaactgagtatgttctggagagtatgataagctgctgtgagatgctcaggaaa
attgtcctgtcattgagggccatgcaatttacaaattccatcagagtaataacctaccgg
tcggcggaggacacggtggaccacatcagcgcaggctttgtcctgtcaggcatgactaga
tcgtgtgctgcagaaatggaaaagctttccttccagctgattgacatcaactctgtctct
acagaagacatcatagctctgtctcaggtcttaaagtcatacccttgcaaaagttaccca
gagttggttgtgaaaggtgggctgattttgaaacctgatattgtacatactcccattgga
agcattgagagcactgagggaaggattttctcttcaatgactgagccatgcatctttcag
acaaatgacccctgcagaatgactagcttgtctgccattccttgtgatgctgacaataca
aacatccataagaaatcagttaagattcagctcagtaagataggcgttcattcctcagac
tactatcctgtcagtgtctctgagctgaactatggtcagacaatgtactggaacaatcac
acatctcagaaccaccagcttctggctcttgacttcagtggtactgtcacagctgtaggg
aaagatgtgaacacactgaaagtgggagatgatgtagtatcatgttatcccattgctgca
tcttctaagattgtgattcctgaagcagcatgctacaagacaaagaggctcacatttctg
aaggaggctccttgtgtgtcctactttgttctggcatgggagatatggcacagactgtta
cctaccatcaaacaacggaggaggttgagcatcatctcctctgttcctgactctagtctg
ctgaaggtcctaatccagacagcaaacaaatcaagatggaatgccattgtagggacacag
tgcagtggaatgtttgctgatgcaattctcctccttccaccatttgataaatctctgttg
gcagaagtcagcaattgtcctgatgtcagacatgttgtcattgtctgtgaatcccagtcc
caccgcttgcttgaacagagtgttttcctgaatgttaatgatagtgttcacatccagact
cttcagatgtccagcatcttacaaaagggatcactcattgccaagaggccacagatttat
aattggctaaagtccatgcatttgggaatttctctagagacctctaccttacagagaatg
tcatccggtagcattgacttcctgtctgttgagtcgtacttcagctcaaagaccctgtct
gttgtggcgctgggtaaagatgattccaaaggcacactgtccaacattcagttgctgcct
aaaccaacccagctattccagaagaagtctgtgtacattgtcacaggtggtctctctggg
ctggggtttgaaacagtgaagttccttgctcagaaaggtggagagtacatcgtcatactc
tccagaagtagccccacaccagacatacagcaggagatagtcattctggagagacaatgg
agtgcctgtattgtatggatgggatgtgatgtctctgtttctgagcatgtgctcagagtg
attggtctcattggtcagaagtttccctcttgtccaatcaaaggggtgtttcacagtgca
gtcgtcctgcatgatggattgattgaaaaccttgacaaatcccactttgagaaagtccta
aagcccaaggtgaatggagccctgaatctgcaccacgccacaaaacactgcaagttagac
tactttgtgtgctactcttccatctcttctttccttggcaatgcctcacaaacaaactat
gcagcagctaattcattcctggactacttctgtcactatagacggaatattggactatct
gggcaatccatcaactggggagctttgaaccttggtctcctgcttaacaaggatcattta
cacaggtttctggagacaaggggattgatggtgatggatgttacagagattcatgagagt
ttggaacaatgcctcttgctaaacaaaccccaacaggttgtatgtaggtttcacatcaag
aacatgatgagcaatgttctctctcaaaatgcatcattgaccgtgcgtataactgcgtta
gtggatgaggcagtgcaaaaactcaaattccaaaagtcacagtctgaacatacttctgtg
tcatcttccccaagtgaatacatcaggtctgtactcagtcaaacaattggtgttgacaag
catgagttagatgacgattctcctctctctgccttaggcatcgactcaatgctagccatg
accctgcagaacctcatctttcaggataggggtgtgaatgtgcctctggttacattgctg
gaccccaataggacactgtctacattggtatcaatgctgatggagagtactgagggtgaa
tctgagaatgatgatcagaaagaggacatgatagatgacatgttgacaagactatag
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integrated database retrieval system
