KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112235152
Entry
112235152         CDS       T05605                                 
Name
(RefSeq) ATR-interacting protein
  KO
K10905  ATR interacting protein
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    112235152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:otw03400]
    112235152
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    112235152
SSDB
Motif
Pfam: ATG16
Other DBs
NCBI-GeneID: 112235152
NCBI-ProteinID: XP_042180849
LinkDB
Position
LG07:complement(72951993..72990436)
AA seq 844 aa
MAYPPRKRLKVVSPAAPCNDPFGGDDDFTQDDLEEIDIIASQAVNGDLAGPGPSSKGTGM
GPIGPRPGESTKPYSGSRQQPSGLARSTSMRDREIPEFPCKDTFGNRHQSKTDGEHLKQL
EAQQADLQKKLKEVEEEILMKNGEIRVLRDSLRVAQQEKETQRQAQLLLEREKRDTQSEK
EKELSKKVQSLLSELHFKEAEMNEMKTKLQNAEKGRKAVASPVPRNSPGLSGPTALLQSA
GGASSSPHCVAIPGGTAFITKETFGAQLPSRSTPGKTPGPGHLRDDGKQQSSGRQEVTHS
DPFNTFQPSHHQGSVLLSLLLQHPLDPSSLGVGHLLCISPDALPGLLTNTCLSSGSSVGS
SSSSTEPRHVPHHNKPHSQQPRFKHCQNLALSGLNMMALPSHHTALPPEDPPNLNPSHSA
PALKNNTRSCPGAVHLLPLLDYHIGLFCQSLEAIALDGSGTGSGKRTLRGSSLSGSSDGS
LASSVEDSLGSQEEFALAALKALHHTVAQSSEVVNTLLALTPGAEESPPQGNTRHGPILA
SGLAPLLPDTSIQPGTSRTSETPVDGTREGPALHPLLRKLLQLSDPSFSTSAFQREALVP
SSLTTLNMLLERAQERQLSRFQCVVSSPALSRCLSLDSSYQTLSLSVSLLAGLAHSDELA
FRICCHTDWCPLLKVFQYITSRPDKTVTDSHWSQLEVEVVRFLTSLFNRKASTWSVFVES
SCQCHSEVVKTTVVLLHRQWLDLRGRVEGSPGGEETIQSPAWCSSPGVDLLREALMLLHW
LFLNNSSFSEHCLPVLHMYDQMIPAIRDTFRRIPHLSESEELALDEICRPESEDTEDMDI
DTGS
NT seq 2535 nt   +upstreamnt  +downstreamnt
atggcgtacccaccccgcaagcgcctcaaggtggtgagccctgcggctccatgtaacgac
cccttcggaggtgacgatgactttacccaggatgatctggaagagattgatattatagca
tctcaggccgtcaacggggatctagcaggaccagggccaagctccaaagggacggggatg
ggacccattggtcctcgaccaggggagtcgacgaagccgtattcggggagtagacaacaa
ccctctggtctggctaggagtacctccatgagagacagagagatccccgagttcccatgt
aaagacactttcgggaacagacatcagtctaagactgacggggagcatttaaagcaactg
gaagcccaacaagcagacctccagaaaaagctaaaggaggtagaggaggagatcctgatg
aagaacggagagatcagagtgctgcgtgactccctcagggtcgcccagcaggagaaggag
acgcaaagacaggctcagctcctcctggagagggagaagagagacactcagagcgagaag
gagaaggagctctccaagaaggtgcagtccctgctgtctgagctgcacttcaaagaggct
gagatgaacgagatgaagactaaactacagaacgcagagaaaggaaggaaagcagtggct
tcacctgtccccagaaacagccccggtctgtctggtcccactgccctgctgcagagtgcc
ggtggtgccagcagcagccctcactgtgtagccattcctggaggaacagccttcatcacc
aaggagacgtttggtgcccagctgccctctaggtcaacgccaggcaagacccccggacca
ggacacctcagagacgatggaaaacaacagtccagcggcagacaggaagtgactcactca
gacccttttaacacatttcaaccctctcatcatcaaggctcagtgctgttaagtctgctt
ttacagcatcctttagaccccagcagtctgggtgtgggtcacctgctctgcatcagccct
gacgcactacctggtctcctgaccaacacctgtctcagctcagggtcttcggttggctcc
agttcctcctcgacagaacccaggcatgttccccaccacaacaagccccacagccagcag
ccacgcttcaaacactgccagaatctggccctgtctggcctcaacatgatggccctaccc
agccaccacactgccttgcctcctgaggacccgcccaacctgaacccttcccactctgcc
cctgccctgaaaaacaataccaggtcctgtcctggtgctgtccacctcctccctctcctc
gactaccacatcggcctgttctgccagagtctggaggctatcgccctggacggctcaggg
acagggtctggtaagaggaccctgagagggagctctctgtccgggtcgtcggacggcagc
ctggcctccagcgtggaggattccctaggcagtcaggaggagtttgccctggcagccctg
aaggccctgcatcatactgtggcccagagctctgaggtcgtgaacaccctgctggcccta
acgcctggagcagaggagagccctccacagggtaacactagacacgggcccattctggcg
tcaggcctggcccccctgctgcctgacacctccatccagcctgggacttctagaacctct
gagaccccagtagatggcaccagagagggtccggccctccaccctctcctcaggaagctc
cttcagctgtcagacccctccttctccaccagcgcttttcagagggaggccctggtgccc
agcagtctgacgactctcaacatgctgctggagagagcacaggagcggcagctttccagg
ttccagtgtgttgtgtccagtccggctctgtctcgctgcctgtctctagactcgtcctac
cagaccctgtctctgtctgtctccctactagctggcctggcccacagcgatgagctagct
tttagaatctgctgtcatacagactggtgtccgttactgaaggttttccagtacatcacc
tccagacctgacaagaccgtcacagactctcactggtcacagctggaggtggaggtggtg
cgtttcctgaccagtctcttcaataggaaagcttccacgtggagtgtgtttgttgagtct
tcctgtcagtgccacagtgaggtagtgaagaccacagtggtgctactccacaggcagtgg
ctggacctccggggccgagtggaggggagccctgggggcgaggaaacgatccaaagccca
gcgtggtgctcctctcctggggttgatctgctaagggaggctctgatgctgctccactgg
ctcttcctcaacaacagtagcttctcagagcactgtcttcctgtcctccacatgtatgac
cagatgattcctgccattagagacaccttcaggaggatcccccacctctcagagagtgaa
gaattggctttggatgagatttgtcgtcctgagtctgaggatactgaagatatggacata
gacactggctcctga

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