Oncorhynchus tshawytscha (Chinook salmon): 112235155
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Entry
112235155 CDS
T05605
Name
(RefSeq) TRAF3-interacting protein 1 isoform X1
KO
K19680
TRAF3-interacting protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112235155
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
112235155
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Gene cluster
GFIT
Motif
Pfam:
MIP-T3_C
MIP-T3
Motif
Other DBs
NCBI-GeneID:
112235155
NCBI-ProteinID:
XP_024259321
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Position
LG03:complement(39027989..39070168)
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AA seq
624 aa
AA seq
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MNGSVAKKTQDTLGRVIKKPPLTEKLLSKPPFRYLHDIFSEVIRTTGFMKGLYAETEMKS
DNVKDKDAKIAFLQKALDVVMLVNGEPLSVKPARIVAGHEPERTNELLQAIAKCCLNKLS
SEEAVKRVLAGDKLDPKGKASSSRSQDKENREGRERQRDQVEKAIREHSAGGWEQKDPDL
PKEQEGRLGDKEKERHRERERSKKSRDRDRTKDRGKDKSRDKNNEREKDRERDKESERDR
DREKSKDKELHRGRDRERDKEKDLDRDKRREKERELRHKQGEEKTKVPEKGDKKARVSED
TKHRPHEEEPSKTAKLEPATAEVTYKQSDSPARIPRPSSAKGQRRWPKAGAQQEEFDSED
GDTPLAQRPVPLENGDATDAVPAHMAHRRIPRPSSARPAPPRVKTQESYTDVTPAERLTS
AKPPAAVITEGKKLSEDEDEQFVVLEASPLPPDMPEMEPTVDLQGDENHGGLVKKILETK
KDFETSPSSPKSQDQTQSLVSEVSRKKERDLVSREIERLRSSIQTVCRSALPLGKIMDYI
QEDMDAMQNELHTWRRENKEHGQALLHEQRVTDSAVEPLKAELAELEQLIKEQQDKICAV
KSNILKNEDKIQKMVTSINFSSRI
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggtcagtggccaaaaagacccaagacactttagggagagttataaagaaacct
ccgcttactgaaaaactgctcagcaaaccgccgtttaggtatctgcacgacatattcagt
gaggtgatccggaccactggcttcatgaagggactctatgcagagactgagatgaagtca
gacaatgtcaaggataaggatgctaagatagcgttcctgcagaaggccctagatgtggtg
atgctggtgaacggcgagcccctctcggtcaagccagcgcgcattgtagccggccatgag
cctgagaggaccaacgagctgctacaggccatcgccaagtgctgcctcaacaagctgtcc
agtgaggaggcggtaaagcgggtgctggccggggacaagctggaccccaaggggaaggcc
agctcctcccggtcccaggacaaggagaacagggagggacgagagcgccaacgagaccaa
gtggagaaggcgatccgagagcacagcgccgggggttgggagcagaaggacccagacctg
cccaaagagcaagagggcagactgggcgacaaggaaaaggagcgccaccgcgagagagaa
aggtcaaaaaagagccgcgatcgagaccgtaccaaagaccgtggcaaggacaagagccgg
gacaaaaacaatgaaagagagaaagaccgagaacgagacaaggagagcgagagggacaga
gacagggaaaagagcaaagacaaggagttgcacagagggagagatcgagagagggataag
gagaaagatttagaccgggataaacggcgagagaaggagagagagctcagacacaaacag
ggggaggagaaaaccaaagtgccagagaagggtgacaaaaaggccagagtgtcagaggac
acaaaacacagaccacatgaagaggagcccagtaaaactgccaaacttgaaccagcgaca
gcggaagtcacatacaaacagtctgacagtccagccagaatacctcggccttcatctgcc
aaggggcagaggcgctggcccaaagcaggagcccaacaagaagagtttgacagtgaagat
ggagacactccgttggcacagaggccggttcccctggagaacggagatgccacagacgca
gtgccagcccacatggcccacaggaggatacctcggcccagcagcgcccggcccgcccct
cctcgggtcaagacgcaggagagctacactgacgtgaccccagctgaaaggctgaccagt
gccaagcccccggcggccgtcatcacggaggggaagaagctttctgaggatgaagatgaa
cagtttgtggtgttggaggcctcccctcttccccccgacatgcccgagatggagccaaca
gtggatctccaaggcgatgagaatcatggtgggctggtgaaaaaaatcctggaaaccaaa
aaagactttgaaacatcaccatcatctccaaagtcccaagaccagacccagagcctggtg
tcggaggtgtccaggaagaaggagcgggacctggtgtctagggagattgagcggctgcgc
tcgtccatccagacggtgtgccgcagcgccttgcccctaggcaagatcatggattacatc
caggaggacatggacgccatgcagaacgagctgcacacctggaggagggagaacaaggaa
catgggcaggccctgctgcatgaacagagagtgacggacagcgcggtggagcctctgaag
gccgagctggccgagcttgagcagctgatcaaggagcagcaggacaagatctgcgccgtc
aagtccaacatcctgaagaatgaggacaagatccagaagatggtaaccagcatcaacttc
tcctcgcgaatatga
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