Oncorhynchus tshawytscha (Chinook salmon): 112235210
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Entry
112235210 CDS
T05605
Name
(RefSeq) integrin beta-2-like
KO
K06464
integrin beta 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04514
Cell adhesion molecules
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112235210
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112235210
09142 Cell motility
04810 Regulation of actin cytoskeleton
112235210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235210
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112235210
04515 Cell adhesion molecules [BR:
otw04515
]
112235210
04090 CD molecules [BR:
otw04090
]
112235210
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
112235210
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112235210
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin beta subunits
112235210
CD molecules [BR:
otw04090
]
Proteins
112235210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
PSI_integrin
EGF_2
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
112235210
NCBI-ProteinID:
XP_042171444
LinkDB
All DBs
Position
LG03:39504286..39527673
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AA seq
777 aa
AA seq
DB search
MYKCVSLLLLLMGRGVLSQEVEVCSKTVINSCSDCIRSGAYCTWCKQLNFTKPGEQEAAR
CDTRAQLEERGCMGNDIISPMNTLTVTKNTALSTNAFVKDEPTQLRPQEVNLKLRPGLPR
TFKLDFRRVEGYPVDLYYLMDLSYSMEDDLRSIKTLGNELFKALQGITKQGRIGFGSFVD
KTVLPFTNTNPEKLKKPCEEKELFCQPAFGYRHVLSMTENKADFNREVDKQRISGNLDSP
EGTLDAIMQAAVCGDRIGWRNSSTRLIVLTTDDGFHMAGDGKLAGILEPNDERCYMDKQL
YTKSNDMDYPSVGQVASQLEKNNIQPIFAVTKNMENVYRELSRMIPKSEVGVLSEDSKNV
VELIQAAYNRLSSKVTVTHDALPDNVRVTYTPLCPGGGPAGDKGVCDNVIVGELVSFNVT
VTADECIDRERSFLIGPLGIKDKLKVSLSTRCECECDDPKEENHKDCDRKGKVNCGMCSC
NAGFVGQKCECAIGEKDESSLRAACRKDNGTECEGRGDCVCGICQCYAQQGGSTYYGTHC
ECENESCEKFQNKLCGGNGKCRCKICECNPEYEGTACQCKKSDEQCRTPSGSVCSGRGTC
QCNQCKCIEGYQRPYCLTCPACQTPCITKGKCIECLGFQTGPFSKNCSQTCKSINEFEMV
ETLPPGKPCDVRDVENCRVFFIIKQLDGEDNYFAQILKTRECPELPNIYAIIGGSIAGVA
LIGLLILLIIKAILYMRDVKEFRRFENEQKKGKWMPGDNPLFMNATTTVANPTFTGE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtataagtgtgtgtctctcctactcctgctgatgggcagaggagttctctcccaggaa
gttgaagtatgttccaaaacggtgatcaactcctgcagcgactgcatcagatcaggagcg
tactgcacgtggtgtaaacaactgaacttcaccaagccaggtgagcaagaagcagctcgc
tgtgacacccgggctcagctagaagagaggggctgcatgggaaacgacatcatatccccc
atgaatacccttactgtgactaagaacaccgccctgtccaccaatgcatttgtcaaggac
gaacccacccagctgcgtcctcaggaggtcaatctgaagctcagaccagggctgcctcgg
acgttcaagctggattttcggagagtggagggctatcctgttgatctctactacctgatg
gatctctcctactccatggaggacgatctgaggagcatcaagactctgggaaacgagctc
tttaaagctctgcaaggaatcacaaaacaagggcgaataggcttcggctctttcgtagac
aagactgtcctgcctttcactaacaccaacccagagaagctgaagaagccatgcgaagaa
aaggagctgttctgtcaacctgcctttggctacaggcatgttcttagcatgacagagaac
aaagctgactttaatagggaggtagacaagcagcgcatctctgggaacttggactcccct
gaagggacgctggacgccatcatgcaggctgcagtatgtggggacaggattggctggagg
aatagcagcactcggctaatcgtcctgaccaccgacgatggcttccacatggcaggggat
ggcaagctggctggcatactggagcccaacgacgagagatgttacatggacaagcagctg
tacactaagagcaatgacatggactacccatctgttggtcaagtggcttcacagttagag
aagaacaacattcagccaatctttgctgtgacaaagaacatggagaatgtatacagggaa
ctcagtagaatgatccccaagtctgaggtgggagtactgtcagaggactccaaaaatgtt
gttgaattgatccaagctgcctacaataggctctcctccaaagtgacagtgactcatgat
gctctccctgacaatgtgagagtcacttacactccactctgtcctggagggggacccgca
ggggacaagggggtctgtgataacgtcatagtaggagaattggtgtctttcaacgtaaca
gtgacggcagatgaatgtatagacagggagaggtcttttctgattggcccattgggcata
aaagacaagctgaaggtgagcttgtcgactcgctgcgagtgtgaatgtgatgaccccaag
gaggagaatcacaaggactgcgacaggaagggcaaagtcaactgtggcatgtgcagttgc
aatgccggcttcgtgggtcagaagtgcgagtgcgccatcggggagaaggacgagagctct
ctgagggcggcatgccggaaggacaacggcacggagtgcgaaggacgaggggactgtgtg
tgtgggatttgccagtgctatgcccaacaaggcggcagcacctactacggcacgcactgc
gagtgtgaaaacgagagctgcgagaagtttcagaacaaactgtgtggagggaacgggaaa
tgccgttgtaaaatttgcgaatgcaaccccgagtacgaaggcaccgcctgccaatgcaag
aagtcggatgagcagtgtcgcacaccaagcgggagcgtgtgcagcggcaggggcacatgc
cagtgtaaccagtgcaagtgtatcgagggctaccagcggccctactgtctgacctgtccc
gcctgccagactccctgtataaccaaggggaagtgcatcgagtgtctgggttttcagaca
ggcccgttcagcaagaactgctcccagacctgtaagagtattaatgaatttgagatggtg
gagacattgccacctggtaagccttgtgacgtgagggatgtggagaactgccgggtgttc
tttatcattaaacagttggatggagaggacaactacttcgcccagatactaaagacccga
gaatgtccggagttgccaaacatctacgccatcattggaggctccattgcgggcgtggcc
ctgatcggcttactgatcctgctcatcatcaaagccatcctctacatgagagacgtgaag
gagttccgcaggtttgagaatgagcagaagaaaggaaagtggatgccgggagacaatcca
ctattcatgaacgcgaccaccaccgtggctaaccctaccttcactggagaataa
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