Oncorhynchus tshawytscha (Chinook salmon): 112235235
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Entry
112235235 CDS
T05605
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112235235 (tmc5)
03037 Cilium and associated proteins [BR:
otw03037
]
112235235 (tmc5)
Transporters [BR:
otw02000
]
Other transporters
Pores ion channels [TC:
1
]
112235235 (tmc5)
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112235235 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
112235235
NCBI-ProteinID:
XP_024259413
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MSHYNNTGVYNNPAYHDSDTLEIDRSPSRKSQSHHSNPHGNPYPRDDGAGGQRGRSDLQQ
LPGGVQSSYNDAQERVPWGGWQEGSWRGRDSIPMGLLPPRSESPRWQQHDLNHSGYQIDQ
ATHYDTTPPVRLPSATSGHVSMRFRGSRKMSLFPVGEAALGNLGLSEDDIRNEMENEEQN
LVKELVAMSTRDRIKAIRDLPMSFDDKKHIRGQVLALKSLKKSRQLNCFSDCSTTISLAF
RRCGANMTLAKQTLELWRGTMKEVGGKFGTGVLSYFKFLKWLLMFNIFSFLVNFGFITIP
QLIYHPTPDIPAGVSFKGLEILTGAGYFSHTVMYYGGYSNKTQGTGGRSEYNMQLAYFFT
VAAYMVLCGAALIYSMASSFRKKYVLADSGLGGAWQLLCSWDFSVTNEKAVRQRKNNLRI
QLKESLSEKVQVALLPLTERLKHYGVFLGTWLLSTGMALGCGTSVYFLCQYDTWRTRQSP
DKASGSLLEEAATLLLPFVVSLINLVVPLFYSLFKKIEHYSNPRMQVYAIIVRNVILKMS
ILGILCSYWMKDVANTFSCWESIVGQALYRLVIMDFLFIMLGSFFGEFLSNVIGTKCIQS
LGVPEFDVARNVLDLIYAQTLAWIGIYFSPLLPVIQIIKFFILFYLKKVSLTQNCQPPRR
AGRAAQMQTIFIAILFFPSFLGALSMVAYTVWTLPPSDKCGPFRGLNTTFSAIQIWMDDL
NRVDAFQWTVWIYQHVIRSEIFYFLVSLIILVFIYIFRQITQGRQLLITLLRQQIVNEGK
DKAFLLEKLQTLQKSKQNKQKNKKQVRKRQENESSSGMLQALIARQRLEQENGDSSSSFG
VPMPSGHSVSTTSSAMMQAMLARQYAEDQDVASYRGVPFPADQTPAPSSALIQAMQARQR
AESQNEDEFYRAPVQSQNPVNALPSAMIQVMQARQRAETEQEEDQFYRVPVHSEHPVSST
SSAMMQVMQARQRAEEEESEFYRAPASSQHPDAPGTGSALIQAMLARQQVEEEYGDRY
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactacaacaacactggagtatataacaaccccgcctatcatgacagtgacacc
ctggagatagataggagtccttccaggaaatcccaatcccatcatagtaacccacatggt
aacccctaccccagggatgatggagccggggggcagaggggcaggtccgacctccagcag
ctcccaggaggggtccagtccagctacaacgatgcccaggagagagtgccctggggcggg
tggcaggaggggagctggaggggcagagacagcattcccatgggtctccttcctccccgg
tcggagagcccacgatggcagcagcatgacctcaatcacagcgggtaccagatcgaccag
gcaacgcattatgacacaacgcctcctgtacgacttccatctgcaacttcaggtcatgtt
tcgatgaggttcagggggtcgaggaagatgagtctattccctgtaggagaggctgctctg
ggcaatctgggcctttctgaggacgacatcaggaatgagatggaaaatgaggaacagaac
ttggtcaaagagctggttgccatgtcaacgagggacagaatcaaggccatccgagacctc
cctatgagctttgatgacaagaaacacatcaggggccaagtgttggcgttgaaatcatta
aaaaaatcccggcaactgaactgcttttcagactgctcgacgactatctcactggcattc
cgcaggtgcggtgctaacatgactttagccaagcagaccctggaactgtggcggggtacc
atgaaggaggtcgggggtaaatttggcacgggggtcctctcctacttcaagttcctaaaa
tggctgctgatgttcaacatcttctccttcctggtcaactttggtttcatcaccatcccc
cagctcatctatcaccccacgccagacatccccgctggggtcagcttcaaagggctagag
atactgaccggagcgggttatttcagccacacagtgatgtattatggcggctacagtaat
aaaacacaagggacagggggccggtctgagtacaacatgcagctggcctacttcttcacc
gtagcagcctacatggtgttgtgtggagccgccctcatctacagcatggccagctcgttc
aggaagaagtatgtccttgcagactcaggcttgggtggagcctggcagctcctgtgtagc
tgggacttcagtgtgactaacgagaaagccgtacgacagcgcaagaacaatctgcgcatc
caactcaaggagtccttatcagaaaaggtccaggtggccctgctacctctgacagagagg
ctgaagcactatggggtcttcctgggtacctggctcctctccacgggcatggccttgggg
tgtggcaccagtgtctacttcctgtgtcaatatgacacatggcggacgaggcagtcaccg
gacaaagcttccggctctctcctggaggaggccgctactctcctcctcccctttgtggtg
tccctgatcaatctggtcgtccctctcttctactctctgttcaaaaagatagagcactac
tccaaccctcgcatgcaggtctatgccatcatagtcagaaatgtcattctcaagatgtcc
attctgggtattctctgctcctactggatgaaggatgtggccaatacattttcatgctgg
gaatccatcgtaggacaagccttgtacagactggttattatggacttcctcttcataatg
ttaggatccttctttggagagttcttgagcaatgtcattgggactaaatgcatacagagc
ctgggagttccagagtttgacgttgccaggaatgtccttgacctgatctatgcacagacc
ctggcatggatcggaatctacttctctcccctcctcccagtgatacagataatcaagttc
ttcatcctcttctacctaaagaaggtcagcctgacccagaactgccagccccccaggcga
gccggcagggcggctcagatgcaaaccatcttcatcgctatcctcttcttcccttccttc
ttgggggctctgtccatggtggcctacaccgtgtggactctgcccccctcagacaagtgt
gggcccttcaggggcctcaacaccaccttcagtgcaatacagatctggatggacgatttg
aacagggtggatgcgtttcagtggactgtctggatctaccagcacgtcatcaggagtgag
atattctacttcctggtctctctcatcatccttgtcttcatttacatcttcaggcagatc
actcagggacgccagctgcttatcactctactgagacagcagattgttaatgaagggaag
gacaaggcgttcttgttggagaagctacagacccttcagaaatccaagcagaacaaacag
aaaaataaaaaacaggtcaggaaaagacaggaaaatgaatcctcctctggcatgctccag
gctctgattgcccgacagcggttggagcaagagaatggtgacagcagcagctctttcggt
gtgcctatgccttccggccactcagtctctacgacatcaagtgctatgatgcaggccatg
ctagccaggcaatatgcagaggaccaggatgtagccagttatcgcggggtgccatttcct
gcagaccaaacacctgcgccctccagtgcactgatacaggccatgcaagccaggcaaagg
gcggagtcacagaatgaggacgagttttaccgggcgccagttcagtcacagaacccagta
aacgcgttacccagtgcgatgatacaggtgatgcaagccaggcagagggcggagacagag
caggaagaggaccagttttaccgggtgccagttcattcagaacacccagtgtcatcaacg
tccagtgcgatgatgcaggtcatgcaggccaggcagagagcagaggaggaggagagcgag
ttttaccgggcgcctgcttcttcacagcacccagatgcgccaggcaccggtagtgctctg
atacaggccatgctagcccggcaacaggtagaggaggagtacggtgacagatactga
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