Oncorhynchus tshawytscha (Chinook salmon): 112235371
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Entry
112235371 CDS
T05605
Name
(RefSeq) nuclear receptor ROR-gamma-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112235371
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112235371
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112235371
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
112235371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TPR_IFT122
Motif
Other DBs
NCBI-GeneID:
112235371
NCBI-ProteinID:
XP_042175271
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MEYEEPESPEHITTEEPIKRGDTVSKKTHLTQIEVIPCKICGDKSSGVHYGVITCEGCKG
FFRRSQLPSVSYSCSRQSNCPIDRASRNRCQSCRLQKCVTQGMSRDAVKFGRMSKRQRES
LRAEVERHRQQQQQQHLQAEAQPALPYPSKACRFRTPHLLQAPAPAYSFPGEPELPPCPT
DVLPYLVCSPGESQAPGLAYQGSCVSPGSGHSDERGFDSRQPSPDQTIGMGIRSYDPEDS
YCPYPPSHSLLHIEELCDSIVRSHRDTSQFRLEELQALRWKLFSREEIHAYQSKSVDEMW
QHCAVRLTEAVQYVVEFAKRIPGFRGLGQNDQITLLKTGSMEVVLVRMSRCFNTENSTVF
FDGKFGSTELFKSLGCGDLMVAVFDFAHSVCALRLTEQQMALFSSLVLINPDRPCLEDRG
RVHRMRRDLEVCLSHMLRRDNQESLQHKLYQKVSVLRSLCSLHVEKLHWFSQRYPLTVHS
VFPPLYKELFTSDLPSVDSL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgaggagcccgaatcacccgaacacatcactacagaagaaccaatcaaaaga
ggagacactgtgtccaagaagactcatttgactcagattgaggtgattccctgtaagatc
tgtggtgataaatcatcaggagttcactatggagtcatcacctgcgagggctgcaagggt
tttttccggcgtagccagctgccgtccgtgtcctactcctgttccagacagagtaactgt
cctatagacagagccagccgcaaccgctgccagagctgccgactgcagaagtgtgtgacc
cagggcatgagccgggatgcggtgaagtttggtcggatgtcgaaacgtcagcgggagtct
ctgcgtgccgaggtggagagacaccgtcagcagcagcagcagcagcatctccaggcagag
gcccagcccgccctgccctaccccagcaaggcatgccgtttccggacaccccacctgctc
caggccccggctccggcctactccttccctggagagccagagctgccaccctgcccaacc
gatgtgctcccctacctggtgtgctccccaggcgagtcccaggctccaggtctggcctac
cagggctcctgtgtgtctcctggtagtgggcactcagacgaaagagggttcgactcccgt
cagccgtctcctgaccagacgatagggatgggaattagatcgtatgacccagaagactcc
tactgcccttaccccccctcccactccctgctacacatagaggagctgtgtgacagtatc
gtgcggtcccatagggacaccagtcagttcagactagaggaactacaggctctgagatgg
aagttgttcagcagagaggagatccatgcctaccagagcaagtcagtagatgagatgtgg
cagcactgtgccgtgaggctgactgaagcggtacagtacgtggtggagtttgccaaacgc
atcccagggttccgtgggcttggacagaacgaccagatcaccctgctcaagactggatcg
atggaggtggttctggttagaatgagcaggtgttttaacacagagaacagcaccgtcttc
ttcgatgggaagtttggcagcactgaacttttcaagtctctgggctgtggtgatctgatg
gtggcggtgtttgacttcgctcacagtgtgtgtgccctgagactgactgagcagcagatg
gctctcttcagctcactggtgctcattaaccccgatcgcccctgtcttgaggatagaggc
agagtacatagaatgagaagagacttggaggtatgcctcagccacatgctacgcagagac
aaccaggagagccttcagcacaagctctaccagaaggtgtcagtgttgcggtctctgtgc
agtcttcatgtggagaagctgcactggttcagccagcgctacccgctcaccgtccactct
gtcttccctcctctatacaaggagctgttcacctctgacctgccttctgtggactccctg
tga
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