Oncorhynchus tshawytscha (Chinook salmon): 112235385
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Entry
112235385 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 7 isoform X1
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112235385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235385
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112235385
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
RhoGEF67_u1
SH3_2
SH3_9
SH3_1
CH
PH
SOS1_NGEF_PH
AsnC_trans_reg
ENTR1
DUF7491
Motif
Other DBs
NCBI-GeneID:
112235385
NCBI-ProteinID:
XP_024259592
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All DBs
Position
LG14:complement(3153042..3179376)
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AA seq
869 aa
AA seq
DB search
MNSAEHTVTWLITLGVLESPKKTISDPEGFLQSSLKDGVVLCKLVERLRPGSVEKIFQEP
RNDSEFQSNIKEFLKGCGSFRVEPFEVNDLLQGLNFTKVLNSLVALAKATEDIGVGSDSV
CAHHSSSLRIKSFDSLNTQSPRGRSSKLLHNQYRSLDMSESGGQRVLVRAKFTFQQTNED
ELSFNKGDMISVSRQEDGGWWEGSFNGNKGWFPSNYVKEVKGSDKPVSPKSATLKNPVKG
FDTPAVSKTYYNLVLQNILETETEYSKELQSLLTSYLHSLQPTDKLSSADVSHILGNLED
ISTFQLMLVQSYEECTRLPESQQRVGGFFLNLLPEMKALYMAYCSNHPSAVNVLTEHSEE
LGEFMEGKGASSPGILTLTTGLSKPFMRLDKYPTLLKELERHMEEHHADRPDIQKCLTSF
KGLSAQCQEVRKRKELELQILTETIRRWEGDDIRTLGPVLYMSHTLCHTHGSEEKRERYL
LLFPNVLLLLSASSRMSGFIYQGKLPLTGMLISRIEDCEMVKNAFEISGSTCERMQVVCN
NQQDLQEWVEHLSRHTQIRNAPSVIMTTPTAKPQSVPCHTLPSHPLTPTRHSESRGVSGG
PAYHTLPHPSSHGAPQTPPMWGPLEPPSTPKPWSLSCLRPAPPLKPSAALCYKEDLSKSP
KSMKKLLPKRKPERKASDEDFATRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGT
DLMHNHVLAEPVDRSSVDTIGCRSSLSRGTEPWSDLSEDSDYDSIWTASSYRTSSVSRSR
EKSGVHMLFPEEEKIIVEETKSNGQTVIEEKTLVDTVYGLKDEVQELKQDNKKMRRTLDE
EQKARKELEKILRRVLKNMNDPTWDETNL
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggcggaacatacggtaacgtggctgataacgttgggggtcttggagtcacca
aaaaagaccatttctgaccctgaaggattcctgcagtcttctctcaaagatggggttgtc
ctgtgcaagctggtggagcgattgcgccctggttctgttgagaaaatcttccaagaacca
aggaatgatagtgagttccagagcaatataaaggagtttctgaaaggctgcgggtccttc
cgagtggagccatttgaggtcaatgaccttctccagggactgaacttcaccaaggtgctc
aactctctggtggcactggccaaagccaccgaggacataggagtgggcagtgactctgtg
tgtgcgcatcactcatcctcgttacgaatcaagtcgtttgactctctgaacactcagtct
ccccgcggacgctcctccaagctcctccacaaccagtaccgcagcctggacatgtcggag
agcggtgggcagcgggtactggtgagggccaagttcaccttccagcagaccaatgaagac
gagctgtccttcaacaagggtgacatgatcagtgtgtcgcgccaggaagacggcggctgg
tgggagggctcgttcaacggcaacaagggctggttccctagcaactatgtcaaggaggtc
aaaggcagtgacaaaccagtgtctcctaagtctgccaccctcaaaaaccctgtgaaaggc
tttgacacaccagctgtcagcaagacctactataacctggtgctccagaacattctagag
accgagaccgagtattccaaggagctccaaagcctactgacctcatacctgcactcactg
caacccacagacaagttgagcagtgcagacgtcagtcacatcctggggaatctggaggac
atctctaccttccagctgatgttggttcagtcctacgaggaatgtaccaggcttccagag
agccagcagagagtagggggcttcttcctcaacctgctgcctgagatgaaggctctctac
atggcctactgctccaaccacccctcggctgtcaacgtcctcacagaacacagtgaggag
ctgggggagtttatggaggggaagggagccagtagtccaggtatcctgaccctcaccact
ggtctcagtaaacccttcatgaggctggacaaataccctacactgctgaaggaactggag
agacacatggaggagcatcatgctgatcgaccagacatccagaagtgtttgacctccttc
aaaggcctctctgcccagtgtcaggaggtgaggaaacgtaaggaactggagctgcagatt
ctaactgagacgatcagacgctgggagggagatgacatcagaaccctgggccctgtcctg
tacatgtcacacacactctgccacacacacggatcggaggagaagcgcgaacgctacctc
ctgctgttcccaaatgttctcctactgctgtctgccagctccagaatgagtggattcatc
taccagggtaagctgccattgacaggaatgcttatctcaaggatagaagattgtgagatg
gtcaaaaatgcttttgaaatatcaggcagtacgtgtgagcggatgcaggtggtgtgtaac
aaccagcaggatttgcaggagtgggtggagcatctgtcaagacacactcagatcagaaac
gccccctccgtgatcatgaccacacccaccgccaagccccagtctgtcccctgccacacg
ctcccatcccatcccctgacccccaccagacactcagagagtaggggtgtatctggaggc
cctgcctaccacaccctaccccacccctcctcccacggggcccctcaaaccccccccatg
tggggtcccctggagccccccagcacccccaaaccctggagcctcagctgcctccgcccc
gcgcccccactcaagccctcggcagcactctgctataaagaggatctgagtaaaagtcct
aagagtatgaagaagctgctgcctaaacgtaagcctgagaggaaagcttcagatgaggac
tttgctaccaggaagagtactgcagctctggaggaggatgcccagatcctgaaagtgatc
gaggcctactgcaccagcgccaaaacacgacagacactcaactcaacatggcagggtact
gatttgatgcataaccacgtgctggccgagccagttgaccggtccagtgtggacactata
ggttgccgtagcagcctgtccagagggaccgagccctggtctgacctatcagaggactcg
gattatgacagtatttggaccgccagtagttacaggacctcctccgtttctcgatccagg
gagaagtcaggtgtgcacatgctcttccctgaggaggagaagatcatcgtggaggagacc
aagagcaacggacagactgtcatcgaggagaagactctagtagacacggtgtatgggctg
aaggatgaagtgcaggagctgaaacaggacaacaagaagatgaggagaaccctggatgaa
gagcagaaagccaggaaggagctggagaagatcctgaggagagtcctgaagaacatgaac
gaccccacctgggacgagaccaacctgtga
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