Oncorhynchus tshawytscha (Chinook salmon): 112235391
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Entry
112235391 CDS
T05605
Name
(RefSeq) guanine nucleotide exchange factor DBS-like isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235391
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112235391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
hSH3
SH3_2
CRAL_TRIO
PH_10
Motif
Other DBs
NCBI-GeneID:
112235391
NCBI-ProteinID:
XP_042179794
LinkDB
All DBs
Position
LG07:complement(2877252..2945758)
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AA seq
1253 aa
AA seq
DB search
MRTGESDENMKEKEEKMGARDEMEVRLQSSGHGGGGGCVHISLEEVKSFYRFSQSCQRLH
NDIMQQESDRLFAADIDPDLRKRFAFLSGGRAENGSPIIVFPEFPAFGELQEEEFHNVLT
YLTSVPSVTASGVGFILVIDRRQDRWTAVKGTLLRIAGSFPVHLQLVLVLRPSTLFQRTL
SDIFFKFNRDEFKMKVPVVMLSSVTELHAYIDRTQLPQELGGTQDYCHDTWISHRTAIEA
FALMVKTTAQTLQSFGTELAETELPNDAQATSNLLATHTEKKGQMKEDLCVALGQGGRLL
ESINEPLQREPDYKMNQDELDNLATVQRLLGQLDETETAFDDFWERHQTKLEQCLQLRHF
EYYFREVRAQLDVVSERVEAFSEVGISPAHAEHILRELNSQEEKACDVLDWALSLAAEGD
GLIESAHYAEDSILPKCSELRAVCDEVTSFLKTKKVLLLRAMELHHCLEKASRWCEEGIY
LLASQPVDRCQSQDGAEAALQELEKYLDTAAQHQITDLKAIWRDYDSILNPELREQVEKV
FQKQVSMQEMFEKRRVSLKKLAAKQTRPVQPVAPRPEAIIKFPMSPPAHRSQESRNAEDN
ILNVENCRIVEVQVQNDGSRHGSLSEEEENLAVLRRHVMNELLETERAYVEELLCVLQGY
AAEMDNPAMAHLLPSALLNRKDVLFGNMPEIYQFHKRTFLRELETYTDVPELVGRCFLER
MGDLQIYEKYCQNKPRSESLWRQCSDCAFFQECQRKLEHKLGLDSYLLKPVQRITKYQLI
LKELLKYSKGCEGSEDLQEALSSILGILKAVNDSMHLIAITGYEGSLTELGRLLMQGSFN
VWTEHKKGHAKVKDLARFKPMQRHLFLHEKALLFCKRREENGEGYEKAPSYSFKHSLNMS
AVGITESAKGDNKKFEIWCNSREEVFIVQAATPEIKTSWLNEIRKVLTGQLKACRESSQK
KASDTMSPSPTSNSPPICLSPFRNCQKSVKKGEEKKTDAVNSDPNSPSSPKHKEETVTSP
TTDRASVAKTRFTLQGFSNLKSQKEFLHPAGKSLTLPMVFSQPGSPLSPDHKAKSHQIKS
DPTPFGCKEPGQTPHITLSRAKWLSTSSLLQAKRRGWNKASFSMDVPEVQDGYSSAEDPM
NSDPEDEGGRKLAVGDRFTVVADYEKEKGGPQDLSVKSGDMVQLIKEGGDGQWFVRNLGS
NKDGWVAAANLLTLITEFKSSQSLCSSEGSVTGNLSTSSSCSETYTSFSDIKP
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgggagagagtgatgagaatatgaaggaaaaagaggagaagatgggagcgagg
gatgagatggaggtgcgtttgcagtccagcggacacggaggaggaggaggatgtgtccac
atctctctggaggaagtgaagagcttctaccggttctcacagagctgtcagcgcctgcat
aatgacatcatgcagcaggagagtgatcgtctgtttgctgcagacatcgatcctgacctc
aggaaacggtttgctttcctctcagggggccgagctgagaacggcagtcccatcatcgtg
ttcccagaattccctgcgtttggcgagctccaggaggaagagttccacaacgtgctgacc
tacctgaccagtgtgcccagtgtgacagcgtctggagtgggcttcatcctggtcatcgac
cgccgccaggacagatggaccgccgtcaaggggaccctgctacgcattgcaggctcattc
ccagtacatttacagctggttctggtcttgcggccctccaccttattccagcggacgctc
tccgacatcttcttcaagttcaacagggatgagttcaagatgaaggtgccggtggtgatg
ctgagctctgtgactgagctccatgcctacatcgaccggactcagctgccccaggagctg
ggaggaacccaggattactgccatgatacctggatctcacaccgcaccgctatcgaggcc
tttgctctgatggtgaagaccacggcacagaccctgcagtcgtttgggacggagctggcc
gagaccgagctacccaacgacgcccaggccacgtccaacttgctggccacacacaccgag
aagaagggacagatgaaggaggacctgtgtgtggccctgggccaggggggccggctcctg
gagagcatcaacgagcccctgcagagagaacccgactataaaatgaaccaggacgagctg
gacaacctggccaccgtgcagagactgctgggccagctggatgagacagagacggcgttt
gatgatttctgggagagacaccagaccaagctggaacagtgtctgcagctccgccatttt
gaatactacttccgtgaggtgcgtgcccagctggatgtggtgtcagagcgggtagaggcg
ttctcggaggttggcatcagtcccgcccatgcagaacacatcctacgagaactcaacagc
caggaggagaaagcctgtgatgtgttggactgggctctgtccctggccgctgagggggat
gggctgattgagagtgctcactatgctgaggactccatcctgccaaagtgcagtgagctg
agggccgtgtgtgatgaggtcacctccttcctcaagaccaagaaggtccttctcctgagg
gccatggagctgcaccactgtctggagaaggcatcgaggtggtgtgaagaagggatctac
ctccttgcctcccagccggtagatagatgtcagtctcaagacggggcggaggccgcgctg
caggagctggagaagtacctggacacggccgcccaacaccagatcaccgacctcaaggcc
atctggagggactatgactccatcctcaacccagagctcagggagcaggtggagaaggtg
tttcaaaagcaggtgtccatgcaggagatgtttgagaagaggagggtcagtctgaagaag
ctggcagccaaacagacacggcccgttcagccagtggctcccaggcctgaagccatcatc
aagttccccatgtcccctcctgctcacaggagtcaagagtcaaggaatgcagaggacaac
atcttgaacgtagaaaactgcagaatagtggaggtccaggtgcagaacgacggcagcaga
cacggctctctgtctgaggaggaggagaacctggctgtgctccgacgacatgtaatgaac
gagctgttggagactgagagggcgtacgtagaggagcttctctgtgtactgcagggttat
gctgcagagatggacaacccagccatggctcacctcctccccagtgcgctgctcaacagg
aaggatgtcctgtttggcaacatgccagagatctaccagttccacaagaggacattcctc
agggagctggagacctacacagacgtccctgagctggtgggacgctgtttcctggagagg
atgggcgacctgcagatctatgagaagtactgtcagaacaaacctcgatccgagagcttg
tggagacagtgctccgactgcgccttcttccaggagtgccagagaaagttggaacacaaa
ctggggttggactcgtacctcctcaagccagtccagaggataaccaaataccagctgata
ctgaaggagttactgaagtacagtaagggctgtgagggttcagaggacctgcaggaggcg
ctgtcctccatcctggggatcctgaaggccgtcaacgactccatgcacctcatcgccatc
acaggatatgaggggagcctgacggagttgggcaggctgctgatgcaggggtcgttcaac
gtgtggacggaacacaagaaaggtcacgctaaggtcaaggacctggcccgctttaagccc
atgcagagacacctgttcctgcatgaaaaagccctgctcttctgtaagagacgggaggag
aatggggagggttacgagaaagccccgtcctacagctttaaacactccctcaatatgagt
gcggtgggcatcacggagagcgccaagggtgacaacaagaagtttgagatctggtgtaat
tccagagaggaggtgtttatcgtccaggctgcgacacctgagatcaaaacatcttggttg
aacgagatcaggaaggttctgacaggccagctgaaggcttgcagggaatctagtcaaaag
aaggcgtcagacacaatgtctcccagtccaaccagcaacagcccacctatctgtctcagt
ccatttaggaactgtcagaagagcgtgaagaagggagaagagaaaaagacagatgctgtc
aactctgaccccaactccccctcctccccaaaacacaaagaggagaccgtcaccagtccc
accactgacagggcatcagtagctaaaacgcgttttacccttcaaggcttcagcaatctg
aagagtcagaaagaatttcttcaccctgctggtaaaagtctaacattaccaatggtattc
tctcaaccaggatccccccttagccctgaccataaggccaaaagccaccagattaagagt
gacccaactccctttgggtgtaaagagcctggtcagactcctcacatcactctgagcagg
gccaagtggctcagcacctctagtctcttacaggccaaaaggagaggttggaacaaggcc
tctttctccatggacgtgccagaagtgcaggatgggtactccagcgccgaggaccccatg
aactctgaccctgaggatgagggaggcaggaagctggctgtcggcgacaggttcacagtg
gtggcggactatgagaaggagaaaggagggcctcaggacctgtcagtaaagagtggagac
atggtgcagctcattaaagagggaggtgacggacagtggtttgttagaaacttggggagc
aacaaagatggctgggtagcagcagccaaccttctcaccctcatcacagagttcaagtcc
tcgcagtccctctgcagctcagagggcagtgtaactggcaacctcagcacctcctccagc
tgcagtgaaacctacacaagtttctctgacatcaagccctaa
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