Oncorhynchus tshawytscha (Chinook salmon): 112235440
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Entry
112235440 CDS
T05605
Name
(RefSeq) PDZ domain-containing protein 4-like
KO
K24056
PDZ domain-containing protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112235440
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
112235440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112235440
NCBI-ProteinID:
XP_024235951
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All DBs
Position
LG16:85334855..85402149
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AA seq
1002 aa
AA seq
DB search
MGCNMCVVNRPEQQYKVMFQKGYVNGTLRPLDGHCNKVKGRRPSQLPQERNTPNSNSQGP
LLLQVVGCRGYRSNGGTLGPGGTLGNVGTMGLVSIPDCVDNCTQTDISFQNILTVGRSTH
HQPHGGSTPTQPPPSPPLPHLMDPYLLNEFCTYDHEYNDPNDYFDIAHHEVDRQEELEYE
EVELYKSSQQDKLGLTVCYCTDDEEDLGIYVGEVNPNSIAAKNGRIREGDRILQINGIDI
QNREEAVAILTREDSINFSLLLARPDIENEPQGNPEEVVMEIPLSMNVEALHTYHLPSLY
REGPHTPTHILSLTTLSNSQELDSGVGRTDESTHNAESSEHDLLGEDQDQTSAPNTNTTN
TPGSMRKFRPGNTPSSPSPHLQEIHLSNDSQPRVVLYGGKGLGGGLGTGLGLGLGLGGYV
PDPLMMMMMMPGLTEEECERYRELLEIRCQFERNRKLAERSQGGRSGTEEEEEEEECEMC
EGEGGSDPKVDVNCNESMTQHKMALLEEELRHLEFKCRNILRVQKMQQLRERRMKAWLLE
EDVVGRGALPTGSEPAPDHDTDPEPANELHRKLSDINELPERERSDPDPDQDKDSTSAYN
TGGESCRTTPLVSTELLPLSLSIQEEGRGGDTPNRHSRDGADKVGSRRGWEKGGHGSLNG
SFSPNSYRKYQIQMTNASTSPIHPKFWSLTRGDNVVGVGSSSQRGIADGGTTTTPPRKSP
RANPTHHDRSGGRTAESSPYFTRRRQGNKPPAPKPYQSCMQLPSSDPEVRIDSLDSVDRA
VVPGMGLGERGAAAGSSGQASPRSVSGAPADSTEAQDSHTGLPLHLPLQPGPASPRMEWK
VKIRSDGTRYVAKRPVRDRLLKARAIKIREERSGMTTDDDAVSEMKQGRYWSKEERKQQL
LRAREHRQRREFMMQSRLDYLKGDRDLQEGTVDGKATGGPPGLQGETGGSPSILALSQKK
FMKKRNKRILDNWVTIQELLAHGSRSPDGKKVYNSLLSVTTV
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggggtgtaacatgtgtgtggtgaatcggccggagcaacagtacaaagttatgttccag
aagggctacgtaaacgggacactgagacctcttgatggacattgcaacaaggtcaaagga
aggagaccatctcagctgccccaggagagaaatactccaaactccaactcccagggtcct
ttgctgctgcaggtggtaggatgtagaggctaccggagtaatggtggcaccttggggcca
gggggtaccctgggtaatgtaggcacaatggggctggtgtccatcccagactgtgtggat
aactgcactcagactgacattagcttccagaatattctgaccgtggggaggtcaacccac
caccaaccccatggcggctccacacccacgcaaccaccaccctctcctccactgcctcac
ctcatggacccttatctactgaatgagttctgtacctacgatcacgagtacaacgatccc
aacgactactttgacatagctcaccacgaagtggacagacaagaggaactggagtacgag
gaggtggagctgtataagtccagtcaacaggacaagctggggttgacagtgtgttactgt
acagatgatgaggaggacctgggaatatatgtaggagaggtcaatcccaacagtatagca
gcaaagaacggacgtatccgtgagggagacagaattctgcagataaatggtattgatatc
cagaacagagaagaggcggtggccattttgaccagagaggacagcatcaacttctcactg
ctgctggccagacccgacatagagaacgagccccagggaaacccagaggaggtggttatg
gagatacctctcagcatgaatgttgaggccctccacacctaccacctgcccagcctctac
agagaggggccacacacccccacccacatccttagtctgactactctcagtaacagtcag
gagctggacagtggcgtgggccgtacagacgaaagcacccacaacgctgagtcctctgaa
catgacctgctgggagaggaccaggaccagaccagcgccccaaacaccaacacaaccaac
accccaggcagcatgaggaagttcaggcctgggaatacaccctcgtccccctcgccccac
ctccaagagatccacctcagtaatgactcccagccaagggtggtgctgtatggaggaaag
ggactgggagggggtttggggacagggttgggattggggttggggttgggggggtatgta
cccgacccactgatgatgatgatgatgatgccgggtctgactgaggaagagtgcgagagg
tacagggagctactagagatccggtgtcagtttgaaaggaacaggaagcttgctgagaga
agccagggaggaagatcagggactgaggaggaggaggaggaggaggagtgtgagatgtgt
gagggtgaaggggggagtgacccaaaagtcgatgtaaactgcaacgagagcatgacgcaa
cacaagatggcgttgttagaggaggaactacgtcatctagagtttaagtgccgcaacatc
ctgagagtgcagaagatgcagcagctgagagaacgacgcatgaaggcgtggcttctggag
gaggacgttgttggccgtggagccctacccactggttctgaacccgcacccgaccacgac
acagacccagagcccgccaacgagctccaccgcaagctatcggacatcaatgagctccct
gagcgggagagatctgacccagacccagaccaggacaaagacagcaccagcgcctacaac
acagggggagagagctgcaggaccacccctctggtcagcaccgagttactccctctgtct
ttgtccatccaggaagagggtagaggtggggacacccccaacagacacagccgagacggg
gccgacaaggtcgggtctcggcggggatgggagaaaggaggacatgggagtctgaatggt
tccttctctcccaacagctacaggaagtaccagatccaaatgaccaacgccagcacaagc
cccatccatccaaaattctggtctctgacccggggggataacgttgtcggggtggggtca
tcatcgcagagggggatagctgatggcggaacaaccacaacacccccacggaagtccccc
agagctaaccccacacaccacgacaggtcagggggtcgaaccgcagagtccagcccatac
ttcacccggcgtcgccaaggcaacaagcctccggcaccgaaaccctaccagagctgcatg
cagctgccgtcgagcgacccggaggtccggatcgactccctggactctgtagaccgagcc
gtggtcccggggatgggtctaggcgagagaggggctgcagcgggcagcagtggtcaggcc
agtcccaggagtgttagtggtgccccagcagacagcaccgaggcccaggacagccacacc
ggcctccccctacacctccctctgcagccggggccggcttcacctcgcatggagtggaag
gtgaagatccgtagcgacgggacgcgctacgttgccaagcgaccagtgagggaccgcctc
cttaaagcccgggcaattaagatcagagaagagcgcagcggcatgacgacggacgacgac
gcggtcagcgagatgaagcagggacgatattggtcgaaggaggagcgtaaacaacagctg
ctgagggccagggagcaccggcagcgccgtgagttcatgatgcagagccggctggactac
ctgaagggagacagagacctacaggagggaactgtggatgggaaggctacaggaggacct
ccaggcctgcagggggagacaggtggtagtcccagtatcctggccctcagccagaagaag
ttcatgaagaagaggaacaagaggatcctggataactgggtcaccatccaggaactactc
gctcatggatccaggtcaccggatggaaagaaggtgtataattctcttctctctgttact
acggtgtga
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