Oncorhynchus tshawytscha (Chinook salmon): 112235441
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Entry
112235441 CDS
T05605
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1-like isoform X1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112235441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235441
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112235441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
PH_19
PH
Motif
Other DBs
NCBI-GeneID:
112235441
NCBI-ProteinID:
XP_042155749
LinkDB
All DBs
Position
LG16:complement(85414668..85514519)
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AA seq
1265 aa
AA seq
DB search
MWCINCASDKTPAILHNNKLIYCVEETPRGDTGSFSDSTCSRGPYLSSSDHRYSSGPGPP
DPRSQHHPQGPPVAPPSPASLAWVQRTRYQPASLALRKQEEEDNKRCKALSDSYELSTDL
QDKKVEMLERKYGGYFLSRRAARTIQTAFRQYRMNKNFERLRSSASESRMTRRIILSNMR
LQYSFDERQGQPQGQGQTQGQGQPQGQGQPQGQGQTQGQGQPQGQGGQRYPHPGRGQPGD
GEMEAGSPPLCQGDIEYTHLDETFSKQVKSLADSIDDVLTCQSGVEDFQEEEEEEEEGDG
GETGVVADDFGECVWRPREGDRQRGGGRGRGGERQSMHEDSIATSYSDVTLYIDDPSSPL
SLDRGPSSTDTEYWSPGVGGVGVGGREDSRDTEGGGSSNSRRSTPCTECRDYSLRGTHLP
LLTIDPPSDSSVDMSDRSDRGSIGRLVYETEPGGGGGGGGEGRSPHGTIKHNPHPNPHPN
PHPNPNGRSAPTHPQAQGQTRTVLPHRPHPSAIPSHLPYHTILHHHHQIPHHTQHPHHPY
PDTPSSSSQSPQGQPLTPLSSSSSTTLPPGGLEQVCCSDGDNDSLNSTTNSNDTINCSSG
SSSRDSLREPLPPLGKQTYQRESRQSWDSPAFNNDVVQRRQYRIGLNLFNKKPEKGIQYL
IERGFVSDTPVGIAHFILERKGLSRQMIGEFLGCRQKQFNKDVLDCVVDELDFSGMDLDD
ALRKFQAQIKVQGEAQKVERLIEAFSQRYCVCNPVLIRQFQNPDTIFILAFAIILLNTDM
YSPNVKPEKKMKLEDFIKNLRGVDNGQDIPRDLLVGIYHRIEKWELRTNDDHVSQVQAVE
RVVVGKKPVLSLPHRRLVCCCQLYEVPDPNRSQRTGVHQREVFLFNDLLVVTKIFQKKKT
SVTYSFRQSFPLVEMQVHMFQNQHYAHGIRLTSANPGGERKVLIVFNAPSQQDRTRFTSD
LRESITEVTEMEKYRVESELEKQKGVVRPVVGGAGGGGLGSGLKGEAVNGTLGRPSLDDS
YASADGLKRTALSSSLRDLSDTGKRGRRNSVGSLDSTMEGSIISSPRPHQRPHMAGGVMP
PGSYDIQDYRPHRPILSPGMGVGGGPGLNHNTATGTTALGPSSGDRGGTGALGSGSGGGG
GSGGSFLGSLFGSKRSNTKPPGPLPSLPPLLPPGLPHYPAPVPRPPLAARPHTPPPPSPT
PTQEDPPKSRLCTPNIATTVPQGSSLLRPITTTTATMPRQGPLPASPPPPPRGPLGLISS
TGAPW
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgcatcaattgcgcttcggacaagacccctgccattcttcataataacaagctg
atatactgtgtggaagagactccacgtggcgacacaggcagtttctctgacagcacctgt
agccgggggccctacctgagcagctctgatcaccgctacagcagtggccccggcccaccg
gacccccgatcccaacaccacccccagggccccccggtggccccccccagtcctgcctcc
ctggcctgggtccagaggacccggtatcagcctgccagcctggcgctccggaagcaggag
gaggaggacaacaagcgctgcaaagccctgtccgacagctatgagctctccacagaccta
caggacaagaaggtggagatgctggagaggaagtatggcggttacttcctgagtcggcgg
gcggcgcgcaccatccagacggcgttccgtcagtaccgcatgaacaagaactttgagcgg
ctgagaagctccgcctccgagagccggatgactcggcgcatcatcctgtccaacatgaga
ctgcagtactcgtttgacgagcggcagggccagccccagggacagggccagacccaggga
cagggccagccacagggacagggccagccacagggacagggccagacccagggacagggc
cagcctcagggccaggggggacagaggtacccccaccctggaagggggcagcctggggat
ggagagatggaggctgggtctcctccactgtgccagggggacatagagtacacacacctg
gatgagaccttctccaaacaggtgaagtccttggctgactccatcgatgatgtcttgacc
tgtcagtctggcgtggaagactttcaggaggaggaggaagaggaggaggaaggtgacgga
ggcgagacaggggtggtggcggatgactttggagagtgtgtttggagaccgagggaggga
gacagacagaggggcggaggaagaggaagaggaggagagagacagagcatgcacgaggac
agcatagccacctcctacagcgacgtgaccctctacattgatgacccctcctcgcccttg
tccctggaccgcggccccagcagcactgacacagaatactggagccctggagtgggtggc
gttggggtgggggggcgtgaagacagccgggacacagagggagggggtagcagtaacagc
cgacgcagcaccccctgtacagagtgtagagactacagcctgagaggaactcacctgccc
ctgctgaccattgatccccctagcgacagctctgttgatatgagtgaccgctcggataga
ggttcgataggtagactggtctacgagacagagccagggggaggtgggggaggagggggg
gaagggaggtcgcctcacggcactattaaacacaacccccacccaaacccccacccaaac
ccccaccccaaccccaacgggcgctctgcccccacacacccccaggcccaaggccagact
cgtactgtgctccctcaccgcccccacccctcggccattccctcccacctgccctaccac
actatcctacaccaccaccatcagatcccgcaccacacccagcacccccaccacccgtac
cccgacactccctcttcgtcctcccagtccccgcagggacaacccctcacccctctgtct
tcctcctcatccaccacactgccccctggtggcctggagcaggtatgctgttcggatgga
gacaacgactctctcaactccaccaccaactctaacgataccatcaactgctcctccggg
tcctcatcacgcgacagcctccgggagcccctcccaccgctcgggaaacagacctatcag
agagagagcagacaaagctgggatagccccgcctttaacaatgacgtggtgcagagacga
cagtaccgcatcggactcaacctgttcaacaagaagccagagaagggtatacagtacctg
atagagagaggcttcgtatcggacacaccggtaggcatcgcccacttcatcctggagagg
aaaggactgagcagacagatgataggagagttcctgggctgcagacagaaacagttcaac
aaggacgtactggattgtgtggtagatgagttggacttctcagggatggatctagatgat
gccctcaggaagttccaggctcagattaaagtccagggggaggcccagaaggtggagaga
ctgatcgaggctttcagtcagcggtactgtgtgtgtaacccggtactgatccgacagttc
cagaaccctgacaccatcttcatcctggccttcgccatcatcctcctcaacacagacatg
tactctcccaacgtcaagccggagaagaagatgaagctggaggatttcatcaaaaacctc
agaggagtggataatggtcaggacattcccagagacctgttagtaggaatctaccatcgg
atagagaagtgggagctacgcaccaacgatgaccacgtgtctcaagtacaggctgtggag
agggtggtcgtcggcaagaagcccgtgctctcgctgccacaccgcaggttggtgtgttgc
tgtcagctttacgaggtgcctgaccctaacagaagccagaggactggagtccaccagaga
gaggtcttcctcttcaacgacctgctcgtggtaaccaagatcttccagaagaagaaaacc
tctgtgacatacagcttcagacagtccttccccctggtcgagatgcaggtccacatgttc
cagaaccagcactatgcccacggtatccgtctgacgtcggccaatcctggcggagagagg
aaggttctgatcgtgtttaatgctccgagtcagcaggacagaacacgcttcacctccgac
ctgagagagagcatcactgaggtgacggagatggagaaatacagggtggagtcggagttg
gagaagcagaaaggggtggtgagacctgttgtgggcggggctggcggtggtggtctgggc
agtggcttgaagggcgaggcggtgaatggcactctgggtagacccagtctggatgacagc
tatgcttccgcagacggactcaaacgtaccgcgctcagctcatcactgagagacctatca
gacacagggaagcggggccgccgaaacagtgttggctccttggacagcacaatggaaggt
tccatcattagcagtcccaggcctcatcagcgcccccacatggctggaggtgtaatgcca
cctggcagctatgacatccaagactaccggcctcaccgccccatcctgagccccggaatg
ggggtggggggtgggccggggctaaatcacaataccgctactgggacgacggcactgggt
cccagcagcggagaccgaggggggacgggagccctggggagcgggtctggagggggaggg
ggcagtggaggctccttcctgggttccctgttcgggagcaagcgctccaacaccaagccc
cctggtcctctcccctctctcccccctctcctcccacctgggctgccacactaccctgca
cctgtcccccgcccaccactggcggcccgcccccacactccccctcctccctcacccact
ccgacacaggaggaccctccaaaatccaggctctgcacgcccaatattgctacaacagta
ccgcagggcagcagcctcctccgccctatcaccaccaccaccgctaccatgcccaggcag
ggcccgctcccagccagccctcctccaccgcccagggggcccctgggcctcatatcctcc
acaggggccccatggtag
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