Oncorhynchus tshawytscha (Chinook salmon): 112235448
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Entry
112235448 CDS
T05605
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112235448
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112235448
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
112235448
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
112235448
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
Type II RPTP family
112235448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
Ig_DSCAM-DSCAML_C
ig
Y_phosphatase3
Pur_ac_phosph_N
PTPlike_phytase
Ig_3
Ig_2
PTP_tm
Motif
Other DBs
NCBI-GeneID:
112235448
NCBI-ProteinID:
XP_042160349
UniProt:
A0AAZ3Q748
LinkDB
All DBs
Position
LG23:178885..502224
Genome browser
AA seq
1461 aa
AA seq
DB search
MNNCAFLLILAVHIYAEGIEGPTAAGCTFDEDSEPSLCDFTQGEEDDFDWQLFRTHNSPY
ASSDLLRGSYMLVNSSQHAAGHRAQLLLQTLSENDTHCVQFSYFLYSRDGHSPGALRAYV
RVNGGPLGSPVWNTSGSHGPQWHQVELAVSTFWPNEYQVLIEATVSRERRGYIAIDDIML
LTYPCYKAPHFSRLGDEEVNAGQNATFQCVASGRASEAEKFLLERHSGDVTSTALVKHLS
HRRFVASLQVDSVQCNNQDLYRCVTQSSRGSGVSNFAELIVKVPPSPIAPPQLLRAGSTY
LIIQLNTNSILGDGPIIRKEIEYRASQSPWSEVHGVNMVTYKLWHLDPDTEYHISVLLTR
PGEGGTGPPGPPLVSRTKCAEPTRALRSLTASEIQSRQLTLQWETLAYNLTRCHTYSVSL
CYHYATVGGGGGHNTTVRECLAVEHNASRFTLRDLPAYHSIQVRLALANPEGKKEGREVT
FQTEEDIPGGITPESLTFTPLEDMIFLKWEEPVEPNGLITQYEISYQSIESSDPGINVPG
PRRTVSKLRNETYHMFSNLHPGTTYLISVRARTTKGFGQTALTEITTNISAPMFDYGDML
SPLSETESTITVLLRPALGRGAPVSTYQVVVEEESGRKVKRELGVQDCYPLPMSHGEAQA
RGTSNYYTAELLPSSLPEASPFTVGDNHTYNGYWNTPLDPRKSYLVYFQAMSNFRGESRI
NCIRIARKVACKDHRRALEVSQHSEEMGLILGVCAGGLVVLILLLGAIIIIIRKGKPVNI
NNTPITYRQEKSHMGSMERSFTDQSTLQEDERVALSAARMAHTCSMRGEQCSSVNESSSL
LGGSPRRQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFDGWDCTK
KKDKTKGRNDTLMGYKSSWTCQPSWDECTDHHNRHRVKLHPLLGDPNTDYINANYIDIRI
NREGYHRSNHFIATQGPKQETVYDFWRMVWQENCFSIVMITKLVEIGRVKCCKYWPDDSE
MYGDIKITLLKLDTLSEYTVRTFALERMGYSAKHEVRQFHFTSWPEHGVPYHATGLLAFI
RRVKVSTPPDAGPVVVHCSVGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINM
IQTEEQYIFIHDAILEACLCGETAILVNEFALIYKDMLRLDSQSNSSQLRDEFQTLNSVT
PHLDAEECSIALLPRNREKNRSMDVLPPDRVLAFLVTTEGESNNYINAALTDSFHQPAAF
IVTPHPLPGTTADFWRLVFDYGCTSVVMLNQLNQSNSAWPCVQYWPEPGLQQYGSMEVEF
LSMSADDDVITRLFCVKNVTRPQEGQLVVCQFQFLRWSAYRDVPDSKKAFLSLLAHVHKW
QRECGDGRTVVHCLNGGGRSGTFCASTILLEMIQYQNMVDIFYSIKTLRNSKPNMVESLD
QYRFCYDLILEYLDCIEDSMR
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactgtgcatttctactgatcctggccgttcacatttacgccgaaggcatagag
ggaccaacagcagcaggctgcacctttgacgaggattctgagcccagtctgtgtgacttc
acccaaggggaggaggatgactttgactggcagctcttcaggacacacaactcaccctac
gcctcttctgacctcctgcgtggttcctatatgctggtgaactcttcccagcatgctgca
gggcatcgcgcccagctcctgctgcagacgctgagtgaaaatgacacacactgcgtccag
ttcagctacttcctgtacagccgcgatggccacagtccaggggcactgcgagcgtatgtt
cgggtcaacggcggcccgctgggtagcccagtgtggaacacgtcggggtcccacggacca
cagtggcaccaagtggagctggctgtcagcaccttctggcccaatgagtaccaggtcctg
atcgaagcaactgtttccagggagcggcgaggctacatcgccattgatgacatcatgctc
ctgacctatccctgttataaggcaccccacttctcccggctgggggatgaggaggtcaac
gctgggcagaatgccaccttccagtgtgtggcatcgggccgggcatcggaagctgagaag
ttcctactggagaggcacagtggggacgtgacatccacagccttggtcaagcacctgagt
caccggcgctttgtggcgtcattacaggtggacagtgtgcagtgcaacaaccaggacctg
taccgatgtgtcacccagtcctccaggggctctggggtctccaacttcgctgaactcatc
gtcaaagttcccccctcccctatcgcgcccccacagctgctgagagctggctccacatat
ctgatcatccagctgaacaccaactccatcctgggagatggccctattatcaggaaggag
attgagtaccgggccagccaatcaccttggtctgaggtccatggggtcaacatggtcacc
tacaagctgtggcacctggacccagacacggagtatcacataagtgtgttgctgacccgg
cccggagagggcggcaccggaccacctggaccacccctcgtcagcaggactaagtgtgca
gaacccacacgggccttgcgaagtctcacagcctcagagatccagtccaggcagctgacc
ctgcagtgggagacgctggcctacaacttgacccgctgccacacctactctgtgtccctg
tgctaccactatgccaccgtagggggcggcggtgggcacaacactactgtgcgtgagtgc
ctggcggttgagcacaatgcctcacgcttcaccctgcgtgacctgccggcctaccactcc
atccaggtccgtttggcgctcgccaaccctgagggtaagaaggagggtcgggaggtcacc
ttccagactgaagaggacattcccggtggcatcacccctgaatcgctgaccttcaccccc
ctggaagacatgatcttcctcaagtgggaggagccagtggaacccaatggtctcatcacc
caatacgagatcagctatcagagcattgagtcgtctgacccaggcatcaatgtgccagga
cctaggagaacagtgtcgaagctgaggaacgagacctatcacatgttctccaaccttcac
cctggcaccacatatctgatttctgtccgtgctcgcacaaccaagggcttcggccagacc
gccctaactgagatcaccaccaacatttctgctccaatgtttgactatggagacatgctg
tcccctctgagtgaaacagagagcacgatcactgtgttgcttcgccccgccctgggcagg
ggagcacccgtcagtacgtaccaggttgtggtagaggaggagagtggcaggaaggtgaag
agggagctgggggttcaggactgttaccctctgcccatgtcccatggggaggcccaggcc
agagggacctccaactactacacggccgagctgcttcccagcagcttgcctgaagccagc
cccttcaccgtgggggacaaccacacctacaatggctactggaacaccccgctggacccc
cgcaagagctacctcgtctacttccaggccatgagcaacttcagaggggaaagcagaata
aactgcatccgaatagcccgcaaagtggcctgtaaggaccaccggcgggctctggaggtg
tcccaacactcagaggagatggggctgatcctgggggtgtgtgctgggggcctggtggtg
ctcatcctgctcctgggggccatcatcatcatcataaggaaggggaagccagtgaacata
aataacacacccataacgtaccgtcaggagaagagtcacatgggttcgatggagcgcagt
ttcactgaccagagtaccctgcaggaggatgagcgtgtggccctctctgcagcacgcatg
gcacacacctgcagcatgcgcggtgagcagtgtagctcagtgaacgagtccagtagtctt
ctggggggttcgccacgacgccagtgtgggcgtaagggctcaccctaccacactggtcag
ctccaccctgctgtgcgcgtggctgaccttctccagcacatcaaccagatgaaaactgca
gaggggtacggcttcaaacaggagtacgagagcttctttgatggctgggactgcaccaaa
aagaaggacaaaactaaagggaggaatgacacgttgatgggatataagtcatcatggaca
tgccagccctcttgggacgaatgcactgatcaccacaaccgacacagagtcaagctccac
ccactcctgggagaccccaacaccgactacatcaacgccaactacatagacattcggatt
aacagggaaggctaccatcggtccaaccacttcatagccactcaggggcccaaacaggag
acagtgtatgacttctggaggatggtgtggcaggagaactgcttcagcatcgtcatgatc
actaaactggtagagataggcagggtgaaatgctgtaaatactggcctgatgacagtgag
atgtatggagacatcaagattacactgctgaagctggacacactttcagagtacacagtt
cgtacttttgccttggagaggatgggctactcagctaaacacgaggtgcgtcagttccac
ttcacgtcctggccggagcatggggttccctaccacgccacaggcctgctggccttcata
cggcgggtcaaagtatccacgccccccgatgctggacctgtggtcgtccactgcagtgtg
ggggcgggccgcacaggctgctacatcgtgctggacgtcatgctggacatggccgagtgt
gagggtgtggtggacatctacaactgtgtcaaaaccctctgctcacgacgcattaacatg
atccagacagaggagcagtacatatttatccatgatgccatcctggaggcttgtctgtgt
ggagagacggcaatcttggtgaatgagtttgcactcatctacaaagacatgctgcgtttg
gactctcagagcaactcctcccagctacgagatgagttccagacgttgaactcggtcacc
cctcacctggatgcggaggagtgcagcatcgccctgctccccaggaaccgggagaagaac
cgcagcatggacgtgctgccgcccgaccgcgttctggcattcctggtcaccactgagggc
gagagcaacaactacatcaacgcggcactcactgacagcttccaccagcccgccgctttc
atcgtcacccctcacccgctccccggcaccaccgccgacttctggaggttggtgttcgac
tacggctgcacctcggtggtcatgctcaaccagctcaaccagtccaactctgcctggccc
tgtgtccagtactggccagagcctggtctgcagcagtatgggtcaatggaggttgagttc
ctgtccatgtcagctgacgacgacgtcatcactcgtctgttctgtgtaaaaaatgtgaca
aggccccaggagggccagctggtggtgtgtcagttccagttcctgcgctggtcagcctac
cgtgacgtgcccgactccaagaaggccttcctcagcctactggctcacgtgcacaagtgg
cagagggagtgtggagatggccgcactgttgtccactgcctgaacggcggtgggcgcagt
gggacattctgtgccagcaccatcctgctggagatgatacagtaccagaacatggtggac
atcttctactccatcaagacactccgcaactccaaacccaacatggtggagtcactggac
caataccgattctgctacgaccttatcctggagtacttggactgcatagaagatagcatg
agatag
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integrated database retrieval system
