Oncorhynchus tshawytscha (Chinook salmon): 112235454
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Entry
112235454 CDS
T05605
Symbol
rubcnl
Name
(RefSeq) protein associated with UVRAG as autophagy enhancer
KO
K25948
protein associated with UVRAG as autophagy enhancer
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235454 (rubcnl)
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Others
112235454 (rubcnl)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
Motif
Other DBs
NCBI-GeneID:
112235454
NCBI-ProteinID:
XP_024259678
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Position
LG03:57312124..57319350
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AA seq
668 aa
AA seq
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MDSQDIKKVVSRGTASPLRKSNHVSWYVDTVPTSPYLSPPHGHCTDTESSGEEKSTGQSS
HDDDDDDEGHFKSNEAPGSYLNREDPSLLTPGDDQYHLPRSSPVISCRRKSLTWHGDTGL
SLSALPPTTVAPLGLSSDPPSTSDRYHLHLTEPPLAAKRSTGTVKAESTPCPCPTISQSH
KPRCVSISANLNRLLTSGLHLPFRGSQGPGLDQEEGPRLRSTSNAHPQLVPIKDKRQSDN
THCSADINKTGCDLDKENAHFIVVDMVLEALEGVKWAVSLSQKSCGAMGNHTEASEDSGA
QICIHPSKTHSLVSTDSGYEGCGANNRPITRGANMSFKSSLGFPIMRCSAEGLAQQLVCD
FRKQWFPTQELKRGRQSIRTSLQELPGGVCMVSDARLSLSEEIRQRTRMRGTLNWAPPRF
QIIFSVHPTQRRSEVVASQHFLCAGCGTEIEPRYIKKLRYCEYLSKYFCDCCQGGAESVI
PGRVLTQWDFGRYPVSDFSKQLLDSVWHQPLFDLTCVGKTLYSRVRELDRFMDLQEQLLG
IKRLLKACRLSEGVLKEFEQLPDHLTQEPHLFSMDDLLRVKRGQLVPLARAVLRVAITHV
ESCQVCLARGFICEFCKQKDVLFPFQSETCTRCQVCKACFHKDCFRDEECPKCARIQCRK
KLMDTFCL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggactcacaggatatcaaaaaggtggtcagtcgaggcactgcctctcctctacggaag
tcaaaccatgtgagctggtatgtggacactgtccccacatccccctatctaagtccacca
cacggacactgcactgacacagaaagcagcggggaagaaaagagcacagggcagtcctct
catgatgatgatgatgatgatgaaggacactttaagagtaatgaagcaccagggagttac
ttaaacagggaggacccctctctgctgaccccaggtgatgaccaatatcacctgcccaga
agtagccccgttatctcctgcaggaggaagtccttaacatggcatggagatacagggctg
tctctgtctgcattgccccctactactgtggcccctctgggtcttagtagtgacccccca
tcaacatctgaccgatatcatcttcatcttactgagcccccactggcagcaaagaggtca
actggtactgtaaaggcagagtctaccccctgtccctgtcctactatatctcagtcacat
aagccacgctgtgtctccatctctgccaacctgaaccgcctgcttaccagcgggctccat
ctgcccttcaggggctcccaggggccagggctggaccaggaggagggtccccgactacgc
tcaacctctaatgcccatccacaattagtgcctattaaggataaaagacaaagtgataat
acacactgctctgcagacattaacaagactggctgtgacctggacaaggagaatgctcat
ttcatagtggtggacatggtgctggaggccttggagggggtgaagtgggctgtgagtctg
agtcagaagagctgtggggctatggggaaccatacagaggcctcagaggactcaggggcc
caaatctgcatccacccctcaaagacacactctcttgtttccactgacagtggatatgaa
ggttgtggcgcaaacaatagaccaataaccagaggcgctaatatgtcctttaaaagttcc
ctaggttttcccataatgcgctgctctgctgagggcctagcccagcagctggtgtgtgac
ttcaggaagcagtggtttcccacacaggagctgaaacgcggccgtcagagcatcagaacc
tccctgcaggaacttcctggaggggtttgtatggtgagtgatgcccgtcttagtctgagt
gaggagatcagacagagaaccaggatgaggggaactctgaactgggccccgccccggttc
cagatcatcttcagcgtccaccccacccagaggcgcagtgaggttgttgcctcccagcac
ttcctctgtgcaggctgtggaactgaaatagaacccagatacatcaagaagctgcgctac
tgtgaatacctgagcaagtacttctgtgactgttgccaaggcggtgctgagtctgtgatc
ccaggccgggtgctgacccagtgggactttggaaggtacccagtcagtgatttttccaag
cagctgctggactctgtgtggcaccagcctctcttcgacctgacctgtgttggcaagacc
ctttacagcagggtgcgagaactggacaggttcatggacctgcaggagcaactactaggc
attaaaagactgctgaaagcatgcagattatctgagggggttctgaaggagtttgagcag
cttcctgatcacctgacacaagagccacacctgttctccatggatgacctcctgagggta
aaacggggtcagctggtgccgctggccagggccgtgctccgggtggccatcacccacgtg
gagagctgtcaggtatgcctggctagaggcttcatctgtgagttctgcaagcagaaggat
gtgttatttcccttccagagtgagacctgcacacgctgtcaagtgtgcaaggcctgtttc
cacaaagactgcttcagagatgaggagtgccctaaatgtgcacggatccaatgtcgaaaa
aagctgatggacacgttctgcctctag
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