Oncorhynchus tshawytscha (Chinook salmon): 112235471
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Entry
112235471 CDS
T05605
Name
(RefSeq) homeobox protein Hox-C9
KO
K09294
homeobox protein HoxB/C/D9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112235471
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
112235471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hox9_act
Homeodomain
Homeobox_KN
CI-B14_5a
Motif
Other DBs
NCBI-GeneID:
112235471
NCBI-ProteinID:
XP_024259691
LinkDB
All DBs
Position
LG16:complement(74260980..74264503)
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AA seq
262 aa
AA seq
DB search
MSATVPLSNYYVDSLINHESEDVIAARFSGSGSHPTGPRPTSLVSECGDYPSCSFASKPS
VFTTSWTPVHSQSSVVYHPYSHQPHLGTDSRYVRSWLEPISGAMSFPGYPANARHYGLKP
DAFQEHRASDCLASNGRTYTDYIYCTTADIREKTQPNIPSPETEPLAFGKHKDEKPELDP
NNPVANWIHARSTRKKRCPYSKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIW
FQNRRMKMKKMNKEKTDRNKEQ
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccacggttcccttaagtaattattatgtagattccttgataaaccacgaaagc
gaggatgttattgcggctcgattctcgggttctggttcgcaccctaccggccctcgtcca
acgtccctcgtatcggagtgtggtgactatccctcctgcagctttgcctctaaaccatcc
gttttcactacatcctggacccctgttcactcccagtcctcagtggtctaccatccatac
agccatcaacctcatctaggaacggactcaaggtatgtgcggtcatggctggagccgatc
tcgggggcaatgtcctttccaggctaccctgccaacgccagacactatgggctgaagccc
gacgccttccaggagcatcgagccagtgactgcctcgcctccaacggacgcacctacacg
gattatatatattgcaccaccgctgacatccgagaaaagacccaaccaaacatcccttct
cccgagaccgagcctttggctttcgggaagcataaagacgagaagccagaattagacccg
aataacccagttgcaaactggattcacgcgcgttcaacaaggaagaagcggtgcccttat
tcaaaataccagactctcgaacttgaaaaggagtttttgttcaatatgtacctaaccaga
gaccgtcgatacgaggtggcaagagtcctcaacctcacggagaggcaggtcaaaatctgg
ttccagaaccggcgcatgaagatgaagaaaatgaacaaagaaaaaaccgaccgcaacaaa
gaacaataa
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