Oncorhynchus tshawytscha (Chinook salmon): 112235513
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Entry
112235513 CDS
T05605
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4
KO
K09663
beta-1,6-N-acetylglucosaminyltransferase 4 [EC:2.4.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00512
Mucin type O-glycan biosynthesis
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
112235513
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112235513
Glycosyltransferases [BR:
otw01003
]
Glycan extension
O-Glycan
112235513
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Gene cluster
GFIT
Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
112235513
NCBI-ProteinID:
XP_024259734
UniProt:
A0AAZ3RFI9
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Position
LG09:16223586..16239304
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AA seq
444 aa
AA seq
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MKIRCVFPSRLRKKHFISSLSSLLVICALLLLCLKVTVKKSVTIEQYGTTAGYDDVEPPH
RYNIDCNAIYNMDPAEVGKSLVIRKQGVVWEQDESLINLTSNCPRYLRSRGYGTVQVSEE
EQAFPLAYSLVVHKSAFMVDKILRAVYTPNNIYCIHYDLKSSELFKEAMEGLARCLPNVF
IASKLETVMYASISRLKADLNCLSDLMGSEVKWRYVINLCGQDFPLRSNIELVADLKKLQ
GGNMMETSHPSKYKKQRFSFHHKLQDAAFKYIQMPVKTDKAKEPPPRGIQMFIGSAYFVL
SWEFVAYVNTSTLARDFLVWSNDTYSPDEHFWATLTRVPGVPGEVPRAQADVTDLMSKTR
LVKWSYLEGPLYPTCTGKHVRSVCIYGAGELYWLMNYGSWFANKVDPKVDPVLIQCLEEK
LEEKQRLLVKAKKSQPKTPSSGKC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattagatgtgtttttccaagcagactgcggaagaagcattttatttcttcatta
tcgtcgctgctggtgatctgtgccttgctgctgctctgcctaaaggtcacagttaaaaag
agtgtgactattgaacagtacgggactaccgcaggctacgatgacgtcgagcctccccac
cgctacaacattgactgcaatgccatctacaacatggatccggccgaggtggggaagtcg
ctggtcatcagaaaacaaggggtggtgtgggagcaggatgagagcttgatcaacctgacc
tctaactgcccgcgctatctccgctcccggggctatggcaccgtccaggtgtctgaggag
gagcaggcctttccactggcttactccctggtggtccacaaatctgccttcatggtggac
aagatcctccgggccgtctacacccctaacaatatctactgtatccactacgacctgaag
tcatcagaactgttcaaagaggccatggagggtctggcccgctgtctgcccaacgtcttt
atcgcctctaagctggagacagtgatgtacgccagcattagccgcctcaaagccgacctt
aactgcctgtctgacctcatggggtcagaggtcaagtggaggtatgtcatcaacctgtgc
ggtcaggactttcccttgcgctccaacatagagctggtggccgacctgaagaagctccag
gggggtaatatgatggagacaagtcatccaagcaaatacaagaagcagcgtttctccttc
caccacaagctgcaggatgccgccttcaagtacatccagatgccggtgaaaaccgacaag
gccaaggagcctcccccacgcggcatccagatgttcatcggcagtgcctacttcgtgctc
tcgtgggagtttgtagcgtatgtgaacacgtctacactggctagggatttcctggtgtgg
tcgaacgacacctactccccagacgaacacttctgggccactctgacacgggtgccgggc
gtgccgggcgaggtgccccgggcccaggccgacgtcacagacctaatgagcaagaccagg
ctggtgaagtggagttacctggagggaccactttacccaacatgcacagggaaacatgtc
cgcagtgtgtgtatctatggggctggggagctgtactggctcatgaactacggcagctgg
ttcgccaataaggtggaccccaaagttgacccagtccttatccagtgtctggaggagaaa
ttagaggagaaacagagactcttggtcaaggctaagaagtcacaaccaaagactccctcc
tctggaaaatgttaa
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