Oncorhynchus tshawytscha (Chinook salmon): 112235516
Help
Entry
112235516 CDS
T05605
Symbol
slc27a4
Name
(RefSeq) long-chain fatty acid transport protein 4
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
112235516 (slc27a4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
otw01004
]
112235516 (slc27a4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112235516 (slc27a4)
Lipid biosynthesis proteins [BR:
otw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112235516 (slc27a4)
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
112235516 (slc27a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
POTRA_2
Motif
Other DBs
NCBI-GeneID:
112235516
NCBI-ProteinID:
XP_042158018
LinkDB
All DBs
Position
LG20:4633502..4688916
Genome browser
AA seq
645 aa
AA seq
DB search
MMRLACCTVLLFVLRLLVGLPWFQVLPSILIFYLGSGGWKFIHIFAKTIGRDIHAAGVLI
KVKWNVKRHLRERNTLPKIFAETVRRHGDKTALIFEGTGEKWSFRQLDEYSNRVANLLLQ
RGFVEGDVVALFMESRSQYVGLWLGMAKIGVEAALINFNLRLEALVHCVTISNAKAVVFG
SELTKAMCEVHSSMGKTVQMLCSGDWDPKQVPVGTECLEPLLDAAPIHLPSRPDRCFTDR
LFYIYTSGTTGMPKAAIVVHSRYYRMAALVYYGFGMTSDDVMYDCLPLYHSAGNIVGVGQ
CLIHGMTVVIKKKFSASRFWDDCAKYNCTIVQYIGEICRYLLNQPVKDIERQHRVRMALG
NGLRQSIWEEFTSRFNVPQIAEFYGATECNCSLGNFGNGNMTGACGFNSQILPFIYPIRL
VKVDEETMELTRGPDGVCIPCKPGEPGQLVGRIIQNDPLRRFDGYVNEGATTKKIANNVF
KKGDSAYLSGDVLIMDQYGYMYFKDRTGDTFRWKGENVSTTEVEGTLSRLLDMKDVVVYG
VEVPGAEGKAGMAAVADPERSTDLEKFGKDLEKALPPYARPVFLRFLNEVNKTGTYKFQK
TEMRREGFDPSITSNKLYFLDPSRGRYVELHQELYSSIISGKQKL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcctggcctgctgcactgtcctgctcttcgtgctccgtctcctggtgggcctg
ccctggttccaagtcctcccctccatcctcatcttctacctgggctctggaggttggaag
ttcatacacatttttgccaagaccatcggcagagacatacatgcagcgggcgtcctcatc
aaggtgaaatggaacgtcaagcgtcacctgcgggaacgaaataccctcccgaagatcttc
gcagagaccgtgcgtcgccatggggacaagacagcgctcatctttgaaggcaccggcgag
aagtggtccttccggcagctggacgagtactccaaccgcgtggccaacctgctgctccag
aggggcttcgtggaaggggatgtggtggctctcttcatggagagccgatcccagtacgtg
ggcctctggctgggcatggccaagattggtgtggaggcggccctgatcaacttcaacctg
aggctggaggccttggtgcactgtgtcaccatttccaacgccaaggctgtggtgtttggc
agcgagctgactaaggccatgtgtgaggtacacagttccatggggaagacagtgcagatg
ctgtgttcaggggactgggaccccaaacaggttcctgtggggacagagtgcctggagcct
cttctggatgctgcccccatccacctgcccagccgcccagaccgctgcttcacagatcgt
ctgttctacatctacacatctgggactactgggatgcccaaagctgccattgtggttcac
agcaggtactaccgcatggcagcgttggtatactatggcttcgggatgacgtctgatgac
gtgatgtacgattgccttccactctaccactctgcaggtaacatagtcggagtggggcag
tgcctgatccatggcatgacagtggtcatcaagaagaagttctctgcctcccggttctgg
gatgactgtgccaagtacaactgcacgattgtccagtacatcggggagatctgccggtac
ctgttgaaccagccagtaaaggacatagagcggcaacaccgggtccgcatggcgctgggt
aacggcctgcgccagtcaatctgggaggagttcacctctcgcttcaacgtgccacagata
gcagagttctatggcgccacagagtgcaactgcagcctaggcaacttcggcaacggcaac
atgacgggagcgtgcgggttcaacagccagatcctccccttcatctaccccatcagactg
gtgaaggtggacgaagagactatggagctcactagagggcccgatggagtctgcatccca
tgcaagcctggtgagcccggccagttggtgggtaggataattcagaatgatcccctgaga
aggtttgatggctacgtgaatgaaggagccaccaccaagaagatcgctaacaatgtcttc
aagaagggagacagtgcctatctgtcaggcgatgtcctcatcatggaccagtatggctac
atgtactttaaggaccgtactggggacacgttccgctggaagggagagaacgtgtcgacc
acggaagtggaggggacgttgagtcgtctattggacatgaaggacgtggtggtctacgga
gtcgaggtcccaggagccgaggggaaggctgggatggctgccgtagcagatccagagagg
tctacagacctggaaaagtttgggaaggatctggagaaagccctgccgccatacgcacga
cccgtcttcctacgcttcctcaacgaggtcaacaagacaggcacctataagttccagaag
acagagatgcggcgggagggttttgacccaagcatcacgtcaaacaaactgtacttcctt
gaccccagcagggggcgctatgtggagctgcaccaggagctctacagcagcatcatctca
gggaagcagaaactgtaa
DBGET
integrated database retrieval system
