Oncorhynchus tshawytscha (Chinook salmon): 112235526
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Entry
112235526 CDS
T05605
Name
(RefSeq) ras-related protein Rab-13
KO
K06109
Ras-related protein Rab-13
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112235526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235526
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112235526
04031 GTP-binding proteins [BR:
otw04031
]
112235526
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
112235526
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112235526
Exosomal proteins of colorectal cancer cells
112235526
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rab Family
Rab8/10/13 [OT]
112235526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
SRPRB
PduV-EutP
RsgA_GTPase
Septin
AAA_7
AAA
DUF6974
FeoB_N
AOC_like
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
112235526
NCBI-ProteinID:
XP_042163618
LinkDB
All DBs
Position
LG03:3717800..3728737
Genome browser
AA seq
199 aa
AA seq
DB search
MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVEGKKVKLQ
VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSRMLLA
NKCDIEAKRKVSKETGEKLAKDHGIRFFETSAKASINVDESFMALARDILLKSSKKQGPT
GREVKITNAEKKSSKCLLL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagtacgacttccttttcaaattattactcatcggagatagtggagtgggg
aaaacatgtctgattattcgatttgctgaggacaacttcaactcaacctacatatcaact
atcggcatcgactttaaagtaaagacgatagacgtggagggaaagaaagtcaaactgcaa
gtctgggacacagcagggcaggagaggtttaagaccatcactacagcctactacagagga
gctatgggcatcatcctggtgtatgacatcacagacgagaagtcctacgagaacattcag
aactggatgaagagcatcaaggagaatgcatcagcgggggtcagccggatgttgctagct
aacaagtgtgacattgaggccaagaggaaggtatccaaggaaacgggggaaaagctggca
aaggatcatgggatcagattctttgagaccagtgcaaaggccagcatcaatgttgatgag
tcttttatggctttggctcgagatattctactgaagtccagcaagaagcagggccccaca
ggtcgcgaggtcaaaatcaccaacgctgagaagaaatcttccaaatgtctcctactgtag
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