Oncorhynchus tshawytscha (Chinook salmon): 112235541
Help
Entry
112235541 CDS
T05605
Name
(RefSeq) RUN and SH3 domain-containing protein 1 isoform X1
KO
K23283
RUN and SH3 domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235541
Membrane trafficking [BR:
otw04131
]
SNARE
SNARE associated proteins
Others
112235541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
112235541
NCBI-ProteinID:
XP_042163620
LinkDB
All DBs
Position
LG03:3768742..3800255
Genome browser
AA seq
735 aa
AA seq
DB search
MAFSPDGETLTLPPPLEVRKSNEETLNKSTSGSTSGSRSKVMTFKELRNRSKHSSPAYQL
ITEPDPDPTVITPDPDFLYNLKWRREKTDSDGIQWEYTSQAQATFLQPPPLTSLAAFREM
FQKAEDAIGQPELCPSQRIGCSASEGNLWRMDGQRKEEGEKRKEEVEVRGTADGGRTWES
RTTAVRSVSFAGSVQRGGTSWMGDDVKAPLRGLGLSSLCLLEKRALVSAVSVAVEAILAQ
FSSSRTLVQKSASINKALSGDSSVNPSLGRLVLQCLCPALRSLLSDGLKPHQSDLILGRR
PNSAWGLVQASTRPGRNSGAQYRGPSTQSLYSLQARIGELPQLRQNKHRFNAFLLGLLNI
KLMDFWLSHLQSCGDVLVTFYRPSSFMRLSLTSCQPLFEELLLLLQPLSLLTLNLDLLFQ
HHHLDPANHSPEIPSPSNQDLGFRLSPRGSASQGSGSSYLESLSELDFGRAEPEALNHNA
SSSSLANSGVGGLVESLKPASLSVGPAKVSGRLAETSPQLMWVQEKEIRELAPPNVEASL
SQQAGQVIQQGWGAVVRWGGKLGQNLAELSLSAVQNQEGTSRDPPEPQTSTQARSDPPQV
VGALAVPWGLGRLFGASNNPTIPTLPTRRPSQWLSPGVSVLTRMVSSSSSANQRRALEPQ
QVEEVLEREMEETWDNPRPLRSVRTLCDHSGTGAELSFQKGEELVVLGCVDQDWIRCRQG
DREGLIPIGYASLIL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggctttctcccccgatggtgaaaccctgaccctgcccccgcccttggaagttagaaaa
tccaatgaggaaaccctgaataaatctacttctgggtcaacgtcagggtcgcgttcaaaa
gtgatgactttcaaggaactgcgtaaccgtagcaaacacagctccccggcctaccaacta
ataactgaaccggatcctgatcctacagtcataacccctgaccctgacttcctctacaac
ctcaagtggaggagggaaaagacggacagcgacggaatccaatgggagtacacctcccag
gcccaggccaccttcctgcaaccacctcccctcacctcattggctgcttttagggaaatg
ttccagaaagcagaggatgcaattggacaaccagagttatgtccctcgcagcggattggg
tgctcagccagtgaagggaacctgtggaggatggatggacagagaaaagaggagggagaa
aagaggaaagaagaggtggaggtgagaggaacagctgatggaggaagaacctgggagtca
agaacgacagcggttcgtagcgtctcatttgccggctctgtacagagaggtgggacttcc
tggatgggcgatgacgtgaaggcccctctgagaggcctagggctgtcctctctgtgcctg
ctggaaaaaagagctctggtcagtgcagtcagtgtggcagtggaggccattttggctcag
ttcagctcctcacggaccctggtgcagaagtctgcctccattaacaaggctctatcagga
gacagcagtgtgaatccgtctctgggccggctggtgctgcagtgtttgtgccccgccctg
cggagcctgctctccgatggcctcaagccccaccagagtgatttgatcttgggcaggagg
ccaaactcagcctggggactggtccaggcctccaccaggccaggtaggaactctggagcg
cagtacagagggcccagcactcagtccctgtacagcctccaggctagaataggagagctg
ccccagctccggcagaacaaacacaggttcaacgccttcctcctcggcctcctcaacatc
aagcttatggatttctggctgtcccatctccagtcatgtggtgatgtgttggtgacgttc
taccggccctcctccttcatgcgtttgtcattgacttcctgccagcctctgtttgaggag
ctcctcctcctgctgcagcccctcagtctcctgacccttaacctcgacctgctcttccag
caccaccacctggatccagccaatcacagcccagagatccccagcccatccaatcaggac
ctggggttcaggctctcgccccgggggtccgcatcccaaggcagtggcagcagctatctc
gagagcctatcagagctggactttgggagagcagaacccgaggcgctcaatcataatgcg
agctcgtcgtccctggccaactcaggggtgggagggttggtggagtcactgaagccagcg
agtctcagtgtggggcctgcaaaggtttctgggcgtcttgcggagacaagtcctcagctg
atgtgggttcaggagaaagaaattagggagctagcacctcctaatgttgaggccagtctc
tcccaacaggcaggacaggtgatccagcagggatggggggctgtggtacgctgggggggt
aagctgggccagaacctggctgaactcagcctgtctgcagtacagaaccaggaggggaca
tccagagaccccccagagccccagaccagtacccaggccaggagtgaccctcctcaggtt
gttggagcattggcggtcccctggggtctgggacggctgtttggagcctccaataacccc
acgatacccacacttccaaccagacgtccgtctcagtggttgtctccaggggtgtctgtt
ctgacccggatggtgagcagcagttccagcgctaaccagaggagggcgctggagccccag
caggtagaagaggtgttagagagagagatggaggagacatgggacaacccaagacccctc
aggtcagtcagaacactatgcgaccactctggcacaggggcggagctaagcttccagaaa
ggggaggagttagtggttttagggtgtgtcgatcaggactggattcgctgtcgtcaggga
gaccgagaggggctcatacccattggctatgcctcactgatcctgtga
DBGET
integrated database retrieval system
