Oncorhynchus tshawytscha (Chinook salmon): 112235594
Help
Entry
112235594 CDS
T05605
Name
(RefSeq) LIM domain-containing protein ajuba isoform X1
KO
K16682
LIM domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112235594
03036 Chromosome and associated proteins [BR:
otw03036
]
112235594
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112235594
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
112235594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
112235594
NCBI-ProteinID:
XP_024259824
LinkDB
All DBs
Position
LG10:complement(18665559..18676554)
Genome browser
AA seq
715 aa
AA seq
DB search
MDRLGTKLLEKLKLTDSGSVKFASSKKKNELVNNSNGNNSSGLPPSLNTATSSPSRPGQF
SLTSPTSTEACGLASSGKGLGERVSSTQHLSTSIIPQPTDCEHQPYSPSTLAPLRRRSTQ
QRASCYLGEGLDIQVRRESGLGDCDPAGSKASLNQRRYSLELQQLVRRQQLLSQPPMSHS
FGPPPAYPVPSSGYGSAPRSGAMAEPHYLPEPERHKRLSLQEAMFYKRLSTGGELWESTR
PASLSHSPHRPSEMGGGGGFFFPPGPALSPCSSFSLQESVLVSPRSSFASSTASGGGGGS
PMGSRCSSNRTSGISLGYDTRYSASSTMAQQLQFSLHTGGSTSGQGYTVSSRAGTPSGSG
AWQDYLDGVFSPGGAGVQDGRHSYPPALGSPAAACYRAGPEWWDEKGAGAARGEETGMGA
AGERTRYSDLPGTHYQEELTRLLLRDAALEGEGLHMGGLMLKEQVNPPINALAKLATLIN
TATASRPIKAQEEPGTGREPSSENRQEFFGTCVKCRKGVYGSDNACQALDSLYHTRCFTC
VSCGRTLRNKDFYNVNGSVYCKEDYMFSGFQAAAEKCSVCGHLILEQQILQAMGNSYHPG
CFRCVVCSKALDGVSFTVDHLSNIYCVSDYNRTFAPKCAACLQPILPAEDSEEILRVVSM
NKDYHFECYHCEDCGKQLSDQPGSQCFPLDSHLLCHSCHMMQVCTSHNIPPHSTN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggaccgacttggaactaagttattggagaagttgaaactgactgactcaggaagtgtg
aaatttgccagttctaaaaagaaaaatgagttggtcaacaacagcaatgggaacaacagt
agtggactaccaccaagcctgaacactgccacttcctcaccttcaagacctggtcagttc
tctctcacctctccaacttcaacggaggcgtgtgggctggctagtagcgggaagggattg
ggagaaagagtctcctctacccagcacctctcaacctccatcatcccccaacctactgac
tgcgaacatcaaccctactccccctcgactctcgcccccctacggcgccggtcgacccag
cagcgtgcctcctgctacctgggggagggtcttgacatccaggtgaggcgtgagtcaggc
ctgggggactgtgatccagctgggtccaaggcctctctgaaccagcgccgctactctctg
gagctccagcagttggtccgacgccagcagctcctctcccagcctcctatgtcccactcc
tttggcccccctccggcttaccccgtcccctcctcgggttatggctctgctccccgcagt
ggggccatggctgagccacactaccttcccgagcctgagcgtcacaaacgcctctccctg
caggaggcgatgttctacaagaggctgagcacaggaggggaactctgggagagcaccaga
ccggcctcgctctctcactccccacaccggccctctgagatgggtggaggaggagggttc
ttcttccccccaggcccagcactgagcccctgctcctccttcagcctacaggagtcggtg
ctggtcagtcccaggtccagctttgcctccagtacagccagcggtggagggggagggagc
cctatgggcagccgctgtagcagcaaccgcaccagtggaatcagcctgggctatgacacg
cgctactcagcctcctccaccatggcacagcagctgcagttctccctgcacacagggggc
tccaccagcggacagggatacacagtctcaagcagggccgggacgccctctgggtctgga
gcctggcaggactacctggatggggtcttctcacctggaggagcaggggttcaggatggc
cggcactcctacccacctgcgttggggagcccggcggctgcttgttaccgggctgggcct
gagtggtgggatgagaagggagcaggggcagcccgaggagaggagactggcatgggtgct
gccggggagcggacgcgctactctgacctcccgggtactcactaccaggaggagctgaca
cgcctgttgctaagagatgcagcgctggagggtgaggggctacacatgggtgggctgatg
ctcaaagaacaggtcaatcctccaatcaatgccctcgccaagctggcaacactcatcaat
acggctacggcttccagaccaatcaaagcccaggaggagccgggaacagggagggagccg
tcgtccgagaatcggcaggagttctttggtacatgtgtgaagtgtaggaaaggtgtgtat
ggctcggataatgcttgccaggctctggacagcctctatcacacacgctgcttcacctgt
gtgtcctgtggtcgcaccctgagaaacaaggacttctacaacgtcaatggctctgtgtac
tgtaaagaggattacatgttctcaggcttccaggctgcagcagagaaatgcagtgtatgt
ggccaccttatcctggaacagcagatcctccaggcgatggggaactcctaccaccctggc
tgtttccgctgtgtggtgtgttccaaagccctggacggagtctccttcactgtcgaccac
ctcagcaacatctactgtgtttccgactacaatagaacgttcgctcctaaatgtgctgcc
tgtttacaacccatcttacctgctgaggacagcgaggagatactcagggtggtgtctatg
aacaaagattatcactttgagtgctaccactgtgaggattgtggaaagcagctttcggat
cagccgggttcccagtgcttccctctggactctcatctcctctgtcactcatgtcacatg
atgcaggtgtgcacctcgcataacattccccctcacagcacgaactga
DBGET
integrated database retrieval system
