Oncorhynchus tshawytscha (Chinook salmon): 112235599
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Entry
112235599 CDS
T05605
Symbol
lrp10
Name
(RefSeq) low-density lipoprotein receptor-related protein 10
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235599 (lrp10)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
112235599 (lrp10)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
112235599
NCBI-ProteinID:
XP_024259830
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All DBs
Position
LG10:18720856..18729054
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AA seq
753 aa
AA seq
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MTASFNLCVLNVLFVTAYSSLELASSTAHCGQSPQVLEAPRGEIRSSVHHSWSYRPRPFN
CSWIIKAHVGEPVILSFSQFSTRCKKEWVSVTSSTGKPITFCGSDLPKPMELMGGNITVT
HHFLPHLFPVSAFCLGYVRDSGECPVVDFECLGGRCLPLSWRCNGQTECLGEGMGLGTDE
QECDGEIEILDPEDDKVVVTTTTPESYIEREREGETGREKSGGRNWETAPVEVEKEEKEV
EEDGDYTKVKEPDNPMEDYWEFLPRQLPSPQPHRAHPSPGVTQAPIEWPCGGLLQTFYGT
FAPPSIKGPPLFCVWTLDPQDSRPLKLDLQLLELGPGDTVTITNRQQGTGELIKTITSES
SYKAIQVESRTGLLSLTYHTLPGSEGLGFNATYRVGGYCPPWEGKCGGAAGGCYTQEQKC
DGRWDCPETGHDEAGCRGCPRDQFACGGVGQRAVLAGHNFIGRPVCFPAKERCNYQLYCA
DGSDEKDCTICQPGTFHCDSNRCVFESWSCDGQVDCKDGTDEMNCTMTLPRKVITAATVG
SLVCGLLLVIAMGCTCKLYSLRTREYSMFAPISRQEAELIQQQAPPSYGQLIAQGIIPPV
EDFPTENPNESSSLSLRGFLQLLRQDTSNSPRRRRRPRFIRRAVRRMRRWGLIPRSASRP
SQPSSSAPQLTEAPSTGVDPSQSTPATTSLAVEAVNLPLPQKLGLLPQTVQYQPPPPPHF
LPPSTLLPPPIVSTPATPQSPPVAVPPPPAAPP
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctctttcaacctttgtgtccttaacgttttgtttgtaactgcctacagcagc
ctggagctggcctccagtactgctcattgtggacaatctccccaagtcctggaagccccg
aggggagagatcagaagctccgtccaccacagctggtcctaccgcccacggccgttcaac
tgtagttggattatcaaggcacacgtaggagagcccgttatcctcagtttctcccagttt
tctacacgctgtaagaaggaatgggtctcggtgacatcatcaactggcaagcccattacc
ttttgtggttccgacctgccaaagcccatggagttgatgggggggaacattacagtgacg
caccacttcctgccacacttattccccgtctctgcgttctgcctgggctacgtcagagac
tctggtgaatgtccggtggtggactttgagtgtttgggtgggcgctgcctgcccctgtcc
tggcgctgtaatggccagacagagtgtctgggtgaagggatggggctgggaacagacgag
caggaatgtgatggagagatcgagatcctggatcctgaggacgacaaagtagtggtaacc
actaccacaccagagtcctacatagagagagagagggagggggagacaggaagagagaag
agcggggggaggaattgggaaacggcaccggttgaggtggagaaagaggagaaggaagta
gaggaggatggggactacaccaaggtaaaggagccagataatcctatggaggactactgg
gagttcctgcctcgtcaactccccagcccccagcctcacagagcccaccccagtcccggt
gtgacccaggcccccatcgagtggccgtgtggcggcctcctccaaaccttctatggaacg
ttcgcccctccttccatcaagggcccccctctgttctgtgtgtggaccctggacccccag
gactccaggcctctgaagctggacctgcagctgctggaactggggcctggagacacggtc
actatcaccaacagacagcagggcaccggggaactgatcaaaactatcaccagcgagtcc
agctacaaggccatccaggttgagtcccggaccggccttctctccctgacctatcacacg
cttcccggctcggaggggctgggcttcaacgccacctaccgtgtcgggggctactgcccc
ccctgggagggtaaatgtgggggtgccgcggggggctgctacacccaggaacagaagtgt
gacgggcgctgggactgtcctgagacggggcacgatgaggcgggatgcagggggtgtccc
agggaccagtttgcttgcggaggggtggggcagcgggcggtgctggcgggtcataacttc
atcgggcgtccggtgtgcttccctgccaaggagaggtgtaactaccagctgtactgtgct
gacgggagcgacgaaaaagactgtaccatatgtcaacctgggaccttccactgcgacagc
aacaggtgtgtgtttgagagctggagttgtgacggccaggtggactgtaaggacgggaca
gacgagatgaactgcaccatgaccctgcctcgaaaggtcatcaccgcggcaactgtgggc
agcctggtctgtgggctgctgctggtcatcgctatgggctgcacctgcaagctctactca
ctgcggacccgagaatacagtatgtttgcgccaatcagccgccaggaggcggagctaatc
cagcagcaggcccctccctcttatggtcaattgatcgcccagggcatcatccctccagtg
gaggacttccccacagagaaccccaatgagtcttcctctctttctctgagaggttttctc
cagcttctcagacaggatacttctaactctccacgacgccgacgccgtccccgattcatc
cgccgggctgtccgtcgcatgcggagatggggcctaatccccagatctgcctccaggccc
tcccagccatccagctctgccccccagctgacagaggccccctccactggtgtggatccc
agtcaatcaactcccgccaccacctcattggctgtggaagccgtcaatctgccattgcca
cagaaactaggcttgctcccacagacagtgcagtaccagccaccaccacccccccacttc
cttcctccatccactctactccctccacccattgtctctactccagccaccccccagagc
cctccagtggctgtccccccacccccagcagcccctccctag
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