KEGG T05605: 112235621

Oncorhynchus tshawytscha (Chinook salmon): 112235621

Entry

112235621         CDS       T05605

Name

(RefSeq) telomerase Cajal body protein 1-like

K23314

telomerase Cajal body protein 1

Organism

otw Oncorhynchus tshawytscha (Chinook salmon)

Brite

KEGG Orthology (KO) [BR:otw00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:otw03032]
    112235621
   03400 DNA repair and recombination proteins [BR:otw03400]
    112235621
DNA replication proteins [BR:otw03032]
Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    112235621
DNA repair and recombination proteins [BR:otw03400]
Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Others
     112235621

SSDB

Motif

Pfam:

WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Lactonase EIF3I WDR90_beta-prop_4th Beta-prop_EIPR1

Other DBs

NCBI-GeneID:

112235621

NCBI-ProteinID:

XP_024259862

LinkDB

Position

LG09:complement(61286561..61297228)

AA seq 558 aa
MSGPVEGGESGDVAGVGREAEAESDPPQSAPPLSQGECLELGENKEEEAPPAAKQPRLSG
DGLELSLSLDPPDTHGGPIEQAGLRQEDLAVLTHNREANQPSVMEEGEEDAGAEEVECHE
NGGPCEDHGTREGGEEKVEEGEQESSAESTSEGQNLGLDFSQNPQMLTGSWAEYSSLPEN
YLKGCKWAPDGLCILTNSADNVLRVYNLPPEIYSYNWDLLTEMSPVLKMAEGDTIYDYCW
YPKMSSLDPDSCFIASSSRDNPVHIWDAFYGDLRASFRPYNHLDELTAAHSLCFSPDGSQ
LYCGFDKTVRVFYTDRPGRDCEERPTVVKKQGQGQSGIISCMAFSPCQSVYACGSYSRTA
GLYSCQDGSQLALLPPRHHGGITHLAFSPDGHYLYTGGRKDPEILCWDLRDPGKILFSLK
RNVATNQRIYFDLDPSGRYLLSGDTEGVVSVWDTLTAPPDGNQELLQPQLHFQAHRDCTN
GISVHPFMPLLVSSSGQRQFLSPGDSSDGDSSGSEGDVVMLSPTPEVRQDNALTVWWAGP
LSPADEGAQEEPLPVVID

NT seq 1677 nt +upstreamnt +downstreamnt
atgtctggtccagtagaggggggtgaaagtggggatgtggcaggagttgggcgggaggca
gaggcggaaagtgatcctcctcaatcagctccacctctatcccagggtgagtgcttggaa
ctgggggagaataaagaagaagaggcccctccagcggctaagcagcctaggctcagtgga
gatgggttggagctgagtctcagcctggacccccctgatacacatggaggacccatagaa
caggcaggattgaggcaggaagacttggctgtactgacccataatagagaggccaaccag
ccaagtgtgatggaagaaggagaagaagatgcgggagccgaagaagtagaatgccatgag
aatggaggtccttgtgaggatcatggcacgagagagggaggagaggagaaggtggaagag
ggggaacaggaaagctcagctgaaagcaccagcgaaggacaaaacctgggtctcgatttc
agccagaacccccagatgctgactggttcctgggctgagtactccagcctccctgagaac
tacctcaagggctgcaaatgggccccagatggcttgtgcatcctgaccaacagtgcagac
aacgtgctgcgtgtctacaaccttcccccagagatctacagctacaactgggacctgctc
actgagatgagtccagtgctgaagatggcagagggggacaccatctatgactactgctgg
taccccaagatgagctccctggaccctgactcctgctttatagccagcagcagtcgtgat
aacccggtccatatctgggatgcgttctacggggacctgcgtgccagcttcaggccctac
aaccatctggatgagctgaccgcagcccactccctctgcttctccccagacggatcacag
ctctactgcggcttcgacaaaacagtcagggtgttctacacagacaggcctggaagagat
tgtgaggaaaggcccactgtagtaaagaagcagggtcagggtcagagtggcatcatctcc
tgcatggcgttcagcccatgccagtctgtgtacgcctgtggctcgtactcccgcaccgca
ggcctctactcctgccaggatggctctcagctggccctgctgccgcccaggcaccacggg
ggcatcacacacctcgccttctcacccgacggacactacctgtacactgggggtcgcaag
gacccagagattctgtgctgggacctgagggacccgggaaagattctattctctctgaaa
aggaatgtggccaccaaccagcggatctactttgacctggacccgtctggccggtacttg
ttgagtggtgacacagagggggtggtgtcagtgtgggacaccctcacagctccccccgat
ggtaaccaggagctactgcagcctcagctccacttccaggcccatagggactgcaccaac
ggcatcagtgtccaccccttcatgccgttgctggtgtcgtccagcgggcagcgccagttc
ctctccccgggggacagtagtgatggagactcctcgggctctgagggagatgtcgtgatg
ttatcacctaccccagaggtcagacaggacaacgctctgactgtgtggtgggccggacca
cttagcccagccgacgagggggcgcaggaggaaccactgccggtggtgattgattga

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