Oncorhynchus tshawytscha (Chinook salmon): 112235623
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Entry
112235623 CDS
T05605
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112235623
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112235623
Surveillance factors
Other surveillance factors
112235623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
DUF6033
Motif
Other DBs
NCBI-GeneID:
112235623
NCBI-ProteinID:
XP_024259864
UniProt:
A0A8C8H6Z6
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All DBs
Position
LG09:complement(61305992..61352958)
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AA seq
1065 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKENKAPEDM
QDKEFSAILQDEPMQPLALEPLTEEEQRNFSMSVNSVAVMRLMGKGGGVAPAGMARGRGT
TRGGGRGRGRGESGGFYQRSIEEGEVGFGRGAREIYRSQSWDDRGERRFEKPARAREGVR
VGLEEVTGVPVPGVPRKDYTRSDSENWRTLREEQEEEEGADPGGSWRLAGARRLDDGGPR
SAGWREHDGPVEGRRRKFEFDFGGGRRRAGSEGLDDDRDGLPEWCTDEEDGEMGTFDASG
AFLPLSKDEEFDFQGIEEEEESMSGMERIMNGGQRVDIKESASDGEVKNRTSPPSSSAPP
ALGLNPPMPQLSLTVAELEASQMADSHPLPAPLPAPAPLAVPVPAKASKMPSEVVPEGSP
AEDSTTQQSPSTSSSLPSPPPSASSSSAATHLPLPPGGDTEDDEGMKHLQQEAEKMVASL
QDTSLEEECFTQTLQESRNTASALPLSHDAAMKWFYKDPQAEIQGPFTTLEMYEWFQAGY
FSMSLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRPPPPRPQPLPPRGPAGNM
DQDRLKKQQQQDLAAAALYQQLQQQQQLFQLINRCGEQGMMPSVNRSMSVPDTGTMWDMH
TSASQQSGGEASLWDLTMNSSTQGPTLEQLQKLQQERREAELRTKREEEEQRKRREEKRR
QQEEQKRREEEEIFRRKQCRQQQELIMKLLQQAPQQGSGSGVGSGWGTGGLNKPGAKGLS
LLDMQEAERLLKQQQRAQQQQRERHQGMSMGQWGDGGAVPGGLWGGGGGMEGKAGGGGAM
GLWEEAVKSQSRGGSMQGLKNSRSSPSLSEQYMLSRRKQRTDEEDKLLKLLQGIKTPQDG
FTTWCEQMLHALNTQANNTSSPLDVSTIVAYLKEVESPYEVLDFICSYLGDTMEAKEFAK
QFLERRAKQKQNQKRQQEQLSKEVAGLTMNNFPLQDSMRGVNPSALQSMFQAAHMAKGGM
YDAQGGMKKKKQPVMLQSDPSILGYSFHNAGERLSLNEMEMVEDY
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggcccagaatggctccgtgcactatccagtgggggg
agtgtgacgtccccccctccttcccccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagagaacaaggccccagaggacatg
caggataaggagttttctgctattctgcaagatgagcccatgcagccgctggcactggag
cctctcactgaggaggagcagaggaacttctccatgtctgtgaacagcgtggctgtgatg
aggctcatgggtaaaggaggtggagtcgcccctgcgggcatggcccgaggcagaggcacc
acacgaggaggaggccgagggcgaggccgaggagagagtggaggattctaccaaagaagt
attgaggagggagaggtgggcttcggccgcggagccagagagatctatcgcagccagagc
tgggatgacaggggcgagaggcgttttgagaagcctgcgcgtgccagggagggggtacgt
gttggattagaggaggtgacgggtgtacctgtgccgggggtgccgaggaaggactacaca
cggtctgacagtgagaactggcgtaccctcagagaggagcaggaggaagaggaaggggcc
gacccaggaggcagctggagactggccggagcacgtagattagatgacggaggcccaagg
tctgcaggctggcgggagcacgacggtccggttgaggggcgtcgcaggaagtttgagttt
gacttcggcggaggtcgcaggcgggccgggagcgaagggttagatgacgacagagacgga
ctgcctgagtggtgcactgatgaagaggacggagaaatgggcaccttcgacgcatctggc
gctttccttcccctatccaaggatgaggagtttgacttccaggggatagaggaggaggaa
gagagcatgtctggcatggagaggatcatgaatggaggacagagagttgacatcaaggaa
tcagccagtgacggggaggtgaagaacagaaccagtcccccctcctcctctgcccctcca
gccctgggcctcaacccccccatgccccagctctccctcacagtggctgagctggaggcc
tctcagatggccgacagccaccctcttcctgctccgctccctgctcctgctcctctcgct
gttcctgtccctgccaaggccagcaagatgccaagtgaagtagttcctgaaggatcacca
gcagaggactccaccacccagcagagccccagcacctcctccagtctgccttccccccct
ccctccgcatcctcctcctctgctgctacccacctccccctgccaccagggggtgacacc
gaggatgacgagggcatgaagcacctgcaacaggaggcagagaagatggtggcgtccctg
caggacacatctctagaggaggagtgttttacccagacgctgcaggagagcagaaacaca
gcctctgccctgcccctctcccacgacgctgccatgaagtggttctacaaggacccccag
gcagagatccagggtccgttcaccaccctagagatgtacgagtggttccaggcgggctac
ttctccatgtctctgctggtgaagaggggctgcgacgagggcttccagccgctgggcgac
gtcattaagatgtgggggcgcgtgcctttcgcccccgggccctccccaccgcccctgctg
gtgagacctccaccaccgcgccctcagccgctgccaccccggggtcctgctggtaacatg
gatcaggaccgtctgaagaagcagcagcaacaggacttggcagcagctgctctctatcag
cagctccagcagcagcagcagctattccagctcatcaacaggtgtggagaacagggtatg
atgccttcagtgaacaggtcgatgtcagtgccagatacagggaccatgtgggacatgcat
acctcagcttcacagcaatcaggcggtgaagccagtttatgggacttaacaatgaattct
tcaactcagggtccaacactcgaacagcttcagaagctccagcaggagaggagggaggct
gaactcaggacgaagcgcgaagaggaggagcagcgcaagagaagagaggagaaaaggagg
cagcaggaggagcagaagaggagggaagaggaggagattttcagacgcaaacagtgtcgc
caacagcaggagctgatcatgaagttgctccagcaggcccctcagcagggctcaggctcc
ggggtggggtctggctggggcactgggggcctcaacaagccaggggccaagggcctcagt
ctgctggacatgcaggaagccgagaggcttctcaaacagcagcagagagcccagcagcaa
cagagggaacgccatcaaggcatgtccatgggtcagtggggggacggaggtgctgtccca
gggggcctgtggggaggcggaggggggatggagggtaaggctggaggcggaggggccatg
ggtctgtgggaggaggcggtgaagagccagtccagaggtggcagcatgcagggtctgaag
aacagccgcagcagcccctcactcagtgagcagtatatgttaagtcgtaggaagcagcgt
acggatgaggaggacaagctgctgaagctgctgcagggcatcaagacgcctcaggacggg
ttcaccacctggtgtgaacagatgctgcatgccctcaacacccaagccaacaacacctcc
tccccactggacgtgtccaccatcgtggcgtacctgaaggaggtagagtctccctacgag
gtgttggactttatctgctcctacctgggagacaccatggaagccaaagagttcgccaag
cagttcctggagcgccgtgccaaacagaaacagaaccagaagaggcagcaggagcagcta
tcaaaggaagtagcagggctgaccatgaacaacttccctctgcaggactccatgcggggc
gtgaaccccagcgcactacagtctatgtttcaggcggcccacatggctaagggagggatg
tacgatgcccaggggggcatgaagaagaagaaacagcccgtgatgctgcagtctgacccc
agcatcctaggctactcgttccacaacgcgggcgagcgtctgagcctaaatgagatggag
atggtggaggattactga
DBGET
integrated database retrieval system
