Oncorhynchus tshawytscha (Chinook salmon): 112235627
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Entry
112235627 CDS
T05605
Name
(RefSeq) perforin-1 isoform X2
KO
K07818
perforin 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112235627
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Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
112235627
NCBI-ProteinID:
XP_024259873
UniProt:
A0AAZ3R357
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Position
LG09:61381180..61412208
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AA seq
614 aa
AA seq
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MKLLGLILFSSAMRHSSICLRRVSRIQTTLVTLLWLWGWWLTPVLPSCTTGRPARCKAAM
SAPGTNLAGEGFNIVTMERKQAYVVDVDNWKTPNGACTLCVNPFMEGQTQRLPAAVVDWR
PLHQCHMKLSSIVFDSSESFVSSSQTDVDGSWQIGLDVNIPNANGSAMVGGTHSRAAKTV
MSQSKEDKYSFIKQDIHCSYYSYRLIEDPPLHPEFSRSLGILPPLYTDQTKADYNRFLAT
FGTHYIRKVKLGGRVKGVTSLRVCKAAVNGYNENEIKDCLEAEASVATNCGTAEANAETK
FCKSDLKKRNTSDTFSSTFNERFTEVVGGQTDGTPDLLFSKIGENSKAFADWASSLKTIP
DIINYSLHPLHLLVKKASKRAGLKKAVEDYILKHALFKHCSGKCKGSSRSSTHDSCQCVC
QTSKEMTSQCCPQEKGLAHLTVTVKKARDLWGDTTSQTDGFVKVLMGKDVKQTRVIHNND
NPMWKEVFKFGTVKLSLASELKFTVYDEDNWSNELLGECKVQPVKAGIHDDMCPMSHGSL
FYSYKVDCAPGLRGHTCGEYAPSGMNSDLSYLYTSRNALNMTQELLAHIRMGQPLGDPLT
FLVKQRDNDHPALS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttctgggcctaatcttgttttctagtgccatgagacattcatccatctgtctg
cgaagggtttctcgcatacagactactctggtgaccctgctatggctgtggggatggtgg
ctgacccccgttctgccctcgtgcaccacgggccggccagcaaggtgcaaggctgccatg
tcagctcctggtaccaacctggcgggcgagggtttcaacattgtcaccatggagcgcaag
caggcctatgttgttgatgtggacaactggaagaccccaaatggagcctgtaccctctgt
gttaaccctttcatggagggccagactcagaggctgcccgcagctgtggtggactggcgt
cccttgcatcagtgtcacatgaagttgtccagcattgtcttcgactccagcgagtcgttt
gtgagcagcagccagacagatgtggacggcagttggcagattggtctggacgttaatatc
cccaacgctaatgggtcggccatggtggggggtacccactccagagctgccaagacggtg
atgagccagtccaaggaggacaagtacagcttcatcaaacaggatatacactgctcctat
tacagttaccgactgatagaggaccctcccctgcaccccgaattctctcgctccctgggc
atcctgccccccctctacaccgaccagaccaaggctgactacaatcgtttccttgcgacc
ttcggtacccactatatccggaaggttaaactgggggggcgggtgaagggcgtcacctca
ctgcgcgtgtgcaaggcggccgtcaatggttacaacgagaacgagatcaaggactgcctg
gaggccgaggcctctgtcgccaccaactgcggaacagccgaagccaatgcagagacaaag
ttctgcaagagtgacctcaaaaaacgtaacaccagtgacaccttcagcagtaccttcaac
gagaggtttaccgaggtggtggggggacagacggacggaacgcccgacctgctcttctcc
aagattggtgaaaactccaaggccttcgctgattgggcaagtagcctgaaaaccatacct
gatatcatcaactactctctccatcctctccacctattggtgaaaaaggccagcaagagg
gcggggctgaagaaggccgtggaggactacatcctgaaacacgccctgttcaagcactgc
tctgggaagtgcaagggaagctccaggtccagtacccatgactcctgtcagtgtgtgtgc
cagaccagtaaggagatgaccagccaatgctgcccgcaggagaagggcttggctcacctt
accgtcaccgtgaagaaagccagggacctctggggagacaccacctcccagaccgacggc
tttgtcaaggtgctcatgggaaaagacgtcaagcagaccagggtgatccataacaacgac
aaccccatgtggaaggaggtcttcaaatttgggacagtcaagctgtccctggccagcgag
ctcaagttcactgtatacgatgaagacaattggtcgaacgaactcctgggtgaatgcaaa
gtccagcccgtcaaagctgggattcacgacgatatgtgtcccatgagtcacggcagcctg
ttctactcctacaaggtcgactgcgccccagggcttcggggccacacctgtggggagtac
gccccttccgggatgaactctgacctctcttacctctatacctcccgcaacgccctgaac
atgactcaggaactgctggctcacatccggatgggccagcccctaggagaccctttgacc
ttcttggtgaagcagagggataatgatcaccctgccctcagttag
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