Oncorhynchus tshawytscha (Chinook salmon): 112235652
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Entry
112235652 CDS
T05605
Name
(RefSeq) trafficking protein particle complex subunit 10-like isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235652
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
112235652
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC10
SNAP
Foie-gras_1
TPR_7
TPR_12
TPR_19
Motif
Other DBs
NCBI-GeneID:
112235652
NCBI-ProteinID:
XP_042162681
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Position
LG26:complement(47383704..47410814)
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AA seq
1268 aa
AA seq
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MEPQEEKPIIYTMENKPIVTCAGDQALFTSLYTPLAQQLPREPMEWRRSYGRAPKMIHLE
ANFVQFKEELLPKEGNKALLTFPFLHIYWTDCCDTEVYKASVRDNMMRWQGNLRLHGSAD
WVIVVVETSDAKKKNKTNILPRSSLVDKIRNDFCNKQNDRCVVLSDPLKNSSRSQESWSA
FLLKLRTLLLMSFTQNLGRFEEDMRTLREKRNQPGWSFCDYFMVQEELAFVFEMLQQFED
ALLQYDELDALFTQYVLNFGAGDRANWLGSFCSPVKSWTGLLLRRPIDMEKRDGIQRGQA
SLLELRSYLFCRQCTLLIFLQRPWEVTQRALELLHNCVQELCLLEVSMLEGALDCWVFLS
CLEVLHRIEGCCDQAQLEANVSHTVGLWAYATDKLKSLGYMCGLVSEKGPLSLELNRTVD
LLAGLGDEKAETVHSLQSPYKKLKEALSSVEAFERHYLELSHAAVEMYTAIGRMRSARLV
GKSLAEFYMRKGDPEQAESFLQNALRSYVSEGWSLPVTHTRKQMAECQKLLEKTENYLQT
SALLAGDANLTNEERIHFCQEILTFANQSTDSKAQKVALSMSSFAQLKQLQFRPATATVH
SGTALQVELCLRSLMPVAVPLEQLAASVHLNLEQGETNGKTRGPQRRPYPGTVLFPLGNS
SAMPPSAAGPSLELEEIQDRSPSDPRTLNSTGMVCKNTHLVMRRHDSSPSPDTPNLVSPV
PVVMDDGAKMLMSGDVTLLPGNNSIVFSVPSQELGTYTLRQLCATVGQVQFVLPHISPLV
QYEVYSQEPQLTVEPLTDQLLAGLPQRAKVRLQTGHYTVKKGDALQLTNIGSMPILTSSS
CPATILNSTAERVDESVLFIQSSDKVTSISLPPTPPYHTLEFQLEVLCVIPSDPVRPENQ
RLTNGEIHHRPRSYSHPDNHMTAINQRMSVDCPWSIYSTPISLTFYIPFKAKHSLLSAGN
RKYIQVCLQNMSDVNFHLMDQRLTEKHHESSLELQSLNTKAQQLVCSKQSVYCVWDVRWK
ENMPVCLQCVFSASFSSASEEVSAFKPYHYEFQLERVTTLYSVRAEIMPAAGQQNCHSGS
LCGLEMSITRLTEPDDDEEDDGGTEEKGQTETEEVCSTKLMYEVAGSSWVVYGRSSGLVS
MPADANANHRVQVELMPLFAGHLPFPDIKVFKYLPPSANSASQPDTDDCVENVILSLMDR
PLDDQGDTASFCSQGSVHSVGRGEQQSRVLPMPRLEPFSPGQVFNHSQGCQVLVLPSTDD
HVLEINAT
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcaagaggagaagcccattatttacacaatggagaacaagccgattgtgaca
tgtgctggggaccaggccttgttcacttctctctacaccccattggcccagcagcttccc
agggaaccaatggagtggaggaggtcgtatggacgagcaccaaagatgatccatttagag
gccaactttgtccagttcaaagaggaactcctccctaaagagggaaacaaagccctcctc
actttccccttcctccatatctactggacagactgctgtgacactgaggtgtacaaggcg
tcagtcagggacaacatgatgaggtggcagggcaacctgcggctccacgggtcagctgac
tgggtcatcgttgtcgtggagaccagcgacgccaagaagaagaacaagaccaacatcctg
cctcgctcttccttagtggacaagatccgcaacgacttctgtaacaagcagaatgaccgt
tgtgtggttctgtcagaccctctaaagaattcgtccaggtctcaggagtcgtggagtgcc
ttcctgctgaagctgaggactctactgctgatgtccttcactcagaacctgggacgcttc
gaggaggacatgcgcaccctccgggagaaacgcaatcagcccggatggagcttctgtgac
tacttcatggtacaggaggagttggcctttgtgtttgagatgctacagcagtttgaggat
gctctgctacagtacgacgagctggacgccctcttcactcagtatgttctcaacttcggg
gctggagacagggccaactggctgggttccttctgctccccggtgaagagctggactggc
ttgctcctgcggcgccccatagacatggaaaagagagatgggatccaacgcgggcaggct
agcctgctagagttacgcagctacctgttctgtcgtcagtgtaccctgctcatcttcctc
cagaggccctgggaggtgacacagagagccctggagctgctgcataactgtgtccaggag
ctatgcctgctggaggtgtctatgctggaaggtgctttagactgctgggtcttcctcagc
tgcctggaggtgctgcatcgtatagaaggctgctgtgaccaggcccagctagaggctaat
gtctcacacactgtgggcctgtgggcctatgctactgacaagctgaagtctctgggctat
atgtgtggtctggtgtcagagaagggtccgctgtctctggagctgaaccgaactgtggac
ctgctggctggactgggggatgagaaggctgagactgtccacagcttgcagagcccgtat
aaaaaactgaaggaggccctgtcttctgtggaggcgtttgagagacattatcttgagttg
tcccatgctgctgtggagatgtacacggccattggcaggatgaggtcagcgcggctcgtt
gggaagagcctggctgagttctacatgaggaaaggtgatcctgagcaggcggagagcttc
ttgcagaatgctctgaggtcatacgtgtcagaggggtggagcctacctgtcactcacacc
aggaagcagatggctgagtgccagaaactgctggagaagacagagaactacctgcagaca
agtgccttgttggcaggtgatgccaatctgaccaatgaggagaggattcacttctgtcag
gagatcctgactttcgccaaccaatcaacagacagcaaggcccagaaggtggcgctcagt
atgagttctttcgcccagctaaagcagctacagttccgcccggcaacagccacggtgcac
tctggcaccgccctgcaggtggagttgtgtctgcgcagcttgatgcctgtggccgtgcct
ctggaacagctggctgccagtgttcacttaaacctggagcagggagagactaacgggaag
accagggggccacagagacggccatacccagggacggtgcttttccccctgggtaactcc
tcagcgatgcccccctccgctgctggtccttctctggagctggaagagatccaggaccgc
agcccctcggaccctcgtacactcaactccaccggcatggtgtgtaagaacacacacctg
gtcatgcgtcgtcatgacagcagcccgtcaccggacacgcccaaccttgtcagcccagtt
cctgttgtcatggatgacggggcaaagatgctaatgagcggtgatgtcactctgctgccg
ggcaacaacagcattgtcttcagtgtaccaagtcaggagctcggtacctacacgttgcgt
cagctgtgtgccacagtgggccaggtccagtttgtcctccctcacatctctcctctggtc
cagtatgaggtctattctcaggagccccaactcactgtggagcccctcacagaccagctg
ctggcaggcctcccccagagggcaaaggtcaggctgcagacaggtcactacactgtgaag
aagggagacgccctgcagctcactaacataggcagcatgcccatcctcacctcctcctcc
tgccctgctaccatcctcaacagcactgcagagcgtgtggatgagagtgttctgttcatc
cagtcgtctgacaaagtgaccagtatctctctacctcccaccccaccctatcacaccctg
gagtttcagctggaggtactgtgtgtcatcccttctgatccagtccggcccgagaaccag
agactcacaaacggagagatacaccaccgtccccggagctacagccaccccgataaccac
atgaccgccatcaaccagaggatgtctgtagactgtccctggtccatctactccactcca
atatctctcaccttctacatcccctttaaggccaagcactcactactatcagcagggaac
aggaagtacatccaggtgtgtctgcagaacatgtcagatgtgaactttcacctgatggac
cagaggctaacagagaaacatcacgagtcttctctggaactgcagtccctcaacactaaa
gcacaacagttggtgtgcagtaagcagagtgtttactgcgtatgggatgtgaggtggaag
gaaaacatgccagtctgtctacagtgtgtgttctctgccagcttctcctctgcttctgag
gaagtctcagccttcaagccctaccactacgagtttcaactggagagagtgacaacactg
tacagtgtgagggcagagatcatgcctgcggctggtcaacaaaactgtcactctggctcc
ctctgtgggctggagatgtccattacacgactgactgaacctgatgatgatgaggaagat
gatggagggactgaggagaaagggcagacagagacagaggaggtctgctccaccaagctc
atgtatgaagtggcaggcagtagctgggtggtgtatggcagaagctcagggctggtgtcc
atgccagcggatgctaatgccaaccacagggtacaggttgagttgatgcccctcttcgct
ggccacctgccattccctgacatcaaggtgtttaagtacctacctcccagtgccaactcc
gccagccaacctgatacagacgactgtgtagaaaacgtcatcctctccctgatggaccgg
cctctggatgatcagggggacacggccagcttctgtagccagggaagtgtccactctgtg
ggcagaggggagcagcagtccagggttcttcccatgcctcgcctggagcccttcagcccg
ggacaggtgttcaaccacagccagggatgccaggtcctggtgcttccctctactgatgac
cacgttctagagatcaacgctacgtga
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