Oncorhynchus tshawytscha (Chinook salmon): 112235668
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Entry
112235668 CDS
T05605
Name
(RefSeq) FHF complex subunit HOOK interacting protein 1B-like
KO
K26420
FHF complex subunit HOOK interacting protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235668
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112235668
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
112235668
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
112235668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
Motif
Other DBs
NCBI-GeneID:
112235668
NCBI-ProteinID:
XP_042162686
LinkDB
All DBs
Position
LG26:47433290..47471643
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AA seq
1158 aa
AA seq
DB search
MSWLSRLTPRGPGGRSSRNVAPSSPCTADPETCLMVFENHWRQVSWVLEQQDPSSSSDDL
TAVRNHTDQMLCLLAEERPGECEGPPGAVTSGNVPPIGPILDLVVSENVLERVVQWHLRR
GLDPDSQGALLKLFEMLIGQSQQPLLQHKAVLQPLLGLLGACAEPQLGCPPSLENSLVLL
LNQICVSMARAPAVLELLFRSAPAQHGPTNLLIFTLLVPFIHRDGAIGQQARDALLLVMA
TSASNQGVARYIAENSYFCPVLATGLSALYSSLPRKIEVRGDDWHALRREDWMGVSSLVL
FMNSLEFCNAVIQVAHPLVRRQLVDYVHNGFLVPVMGPALHKSSVDEMIASTTYLDLFLR
SVTETSLLKAFLRFILMHRHDNDTILDTLLTRINSNSRLCMVSLSLFRTLLSLNCEDLML
QLVLRYLLPCTHVMFSQRRAIRDTDLYGKSADKFLSLIPDCCRLSTAPSAEREEEPALWG
KVLNSPSSESPVHHKPSTPSRLALFMRQQSTGGGPCTPSPTETVPSSPGAGPNTPLSPDS
PMHPVPEVLDWESGYLEYLRDARRGVELCSWACRNWSAPYDGEDPSPNAAPLPPPPPTSN
PSLAMFPEHFSFQQSGSTSPGQQRAAVVAAARSEWSSTERDSGEWDVTIGENSCISLTPR
TKKRSLQRDVHIPKPLHLPPDSASLADPSAVPHLRSAPTKGAQQAIINGTLLGGQGDRCR
DSQDGGMEVKKVKRELGEQRHPAGGDSSQNGEVSACPAPVQSCGSLQGFYSEGNGSGAAE
SSRGLPPHKPSHTQTLSASLLSEPRTNSSNDRMTLRAAASSPGSGPPEAMLFNQSEAVER
LISELLDGAGPEEGGQQGPGDSNGQGISIEAFTQELRELEDRVRERSKGVGLLRQLEETT
RDPHSGEPPPPSPLDADLMGSGVVAGVVGVFRPLGQTSTQPYTGPFMVVLFAKLENMLQN
SLYVNILLTGILGQLACYPQPLLRSFLLNTNMVFQPSVKSLIQVLGSVKSRIETFAASHE
DFPAMLKKAQRYLAARGKVDWADSPMGMPTLRRSDALVKSRKPSLGDLILRHTNSPTRAR
HAAQLALAHVRDGGQSLHSALFRGGSGASGLEKQAEALRVKNAVYCAVIFSEFLKELAAL
AQEHAVSMPFLQSHDTEE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgagctggctgagccggctgacccctcgaggtccggggggcaggtccagtaggaacgta
gcaccctccagtccatgtactgctgacccagagacctgcctcatggtgttcgagaaccac
tggagacaggtgtcctgggtgctggagcagcaggatccgtcaagctctagcgatgacctc
accgcggtgcggaaccacaccgaccagatgctgtgcctcctggccgaggagcgaccgggg
gagtgtgagggaccccccggggcggtaacgtccggtaacgtcccccccattggccccatc
ctggacctggtggtgtctgagaacgtcctggagcgtgtggtgcagtggcacctgaggcgt
ggcctggaccccgacagccagggggcgctactcaagctgtttgagatgctgataggccag
tctcagcagcccttgctccaacacaaggcggtgctgcaacctctactgggtcttctgggg
gcctgtgctgagcctcagcttggctgccctccctctctggagaacagcctagtgctgctg
ctcaaccagatctgtgtgtcgatggcgcgtgctcccgctgtgttggagctgttgttcagg
tcggccccggcccaacacggtcctaccaacctgctcatcttcactctgctggttcccttc
atccaccgtgacggggccatcggacagcaggcccgcgacgccctcctcctcgtcatggca
acctcggccagcaaccagggcgtggcacgctacattgcagagaactcctacttctgcccg
gtgctggccacgggcctcagtgctctctactcctccctgccgaggaagatagaggtacgg
ggggatgactggcacgctctgcgcagggaggactggatgggcgtgtcctctctggtgctc
ttcatgaactctctggagttctgtaacgctgtcattcaggtggctcaccccctggtccgc
agacagctggtcgactatgttcacaacggcttcctggtccctgtcatgggacccgcccta
cacaagtcatctgtagatgagatgatagccagtacaacctacctggacctgttcctgcgc
agcgtcacggaaacgtctctccttaaagccttcctgcgttttatcctcatgcatcgccac
gacaacgacaccatcctggacacgttgctaacgcgcatcaacagcaactcaaggctgtgt
atggtgtctttgagcctgtttaggactctgctctctctcaactgtgaagacctcatgttg
cagctcgttctcaggtatctgctgccctgtacccatgtgatgtttagtcagaggcgtgcc
atcagggacactgatctctatggtaaatcagctgacaagttcctgtccctgatccccgac
tgctgccgtctgagcacagcgccctctgctgagcgggaggaagaacctgccctttggggg
aaagtcctgaacagccccagctcagagtctccagtacaccacaaacccagcactccatcc
cgcttggccctcttcatgcgccagcagagcactggaggagggccctgcaccccctccccc
accgagacggtcccctcgtcgcccggtgccggccccaacacccccctgtccccagatagc
cccatgcaccccgtcccagaggttctggactgggagtcggggtacctggagtacctcagg
gacgcacgtaggggggtagagctgtgctcctgggcctgccggaactggtcagccccctac
gacggagaggacccctcacccaacgcggcccctctaccgcccccgccccccacctccaac
ccctccctggccatgttcccagagcacttctccttccagcaaagtggtagtacctccccc
ggccagcagagggcagcggtggtggcagcggcgcggtcagagtggagcagtacagagagg
gacagtggagagtgggacgtcaccatcggtgagaacagctgtatcagcctcacaccccgc
accaagaaacgcagcctgcagagagatgtccacatccccaaacctctccatctccctcct
gattctgcctccctcgctgacccctccgctgttccccacctccgctccgcccccaccaag
ggcgctcagcaggccatcatcaatgggacgttgttgggggggcagggggacaggtgtagg
gacagccaggatggagggatggaggttaagaaggtgaagagggagttgggtgagcagcgg
caccctgctgggggggactctagtcagaacggggaggtgagtgcctgccctgcccctgtc
cagtcctgcgggtccctacagggcttctacagtgaagggaatgggagtggggctgcggaa
agctccagaggtcttccaccacacaaaccgagtcacacccagactctgtctgcttcactg
ctctcagaaccccgtaccaactcctccaacgataggatgaccctccgtgctgcagcatcc
agccctggatcgggacctccagaggcaatgctctttaaccagtcagaagcagtggagaga
ctgatctctgagctcctggatggggctgggcctgaggagggggggcagcaggggcctgga
gactccaacggccagggcatcagcatcgaggccttcacccaggaactccgggagctggag
gacagggtgagggagaggagcaagggggtggggctgctcagacagctggaggagaccacc
agagacccccactcaggggaaccaccgcccccctctcccctggacgctgacctgatgggg
agcggggtagtggctggagttgtgggggtgttcaggcctctaggacagacatccactcag
ccctacacaggtccgttcatggtggttctgtttgccaagctggagaacatgctccagaac
tctttgtatgtaaacatcctgttgacggggattctgggccagcttgcctgctaccctcaa
cccctgctccgatctttcctcctcaacaccaacatggtgttccagcccagtgtcaagtct
ctcatacaggtcctgggctcagtgaagagccgcatcgagacgtttgcagcgtcccatgag
gatttccctgccatgctgaagaaagcccagcgctacctggctgccaggggcaaggtggac
tgggcggactcacccatggggatgcccacactgcgacgctctgatgctctggtgaagagc
cggaaaccctcactaggcgacctgatccttcgccacaccaacagccccacgcgggcacgc
cacgccgcccagctcgccctggcccacgtacgagacggtggccaatcgctgcacagtgcc
ctgttccggggcgggtcaggggcgtcggggctggagaagcaggcagaggctctgagggtg
aagaacgccgtctactgcgccgtcatcttctccgagttcctcaaggagctggccgctctg
gcccaggagcacgctgtctccatgcccttcctccagagccacgacactgaggagtga
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