Oncorhynchus tshawytscha (Chinook salmon): 112235702
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Entry
112235702 CDS
T05605
Name
(RefSeq) AP-1 complex subunit gamma-1 isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112235702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235702
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
AP-1 complex
112235702
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
DUF11
Peptidase_M73
Motif
Other DBs
NCBI-GeneID:
112235702
NCBI-ProteinID:
XP_024259951
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Position
LG10:complement(67539298..67555713)
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AA seq
790 aa
AA seq
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MSPSVRLQEMIRVIRGARTQGEERGVIQRECAAIRAQFRQADNGTRSHNLAKLLYVHMLG
YPAHFGQMECVRLIASPRYNEKRVGYLGAMMLLDEKQDASLLITNSIKNDLSHSSQYVQS
LALCTLACMGSAEMCRDLAPEIDRLLRASNSYIKKKAALCAVHMVRKVPELGELFTPAAR
SLLSEKNHGVLHGAVVLITELCERNPDTLEQFRKAVPELVLMMKGLVMSGYSPEHNVAGI
SDPFLQVRILRLLRILGRNNDTASDAMNDLLAQVATNTDSSKTAGSAVLYETVLTVMDIK
SESGLRVLAVNILGRFLLNNDRNIRYISMTSLQKIVQTDHNAVQRHRGTIVDCLKDQDAS
VKRRALELSLALVSAVNIRSLMKELLLFLSSCPPELRAHTTSGIFNAAERYAPSQRWHID
TILHVLTTAGGDVRDETVPNLIQLITTATELHCYTVHKLYRALITDISVQSLVQVACWCI
GEYGDLLLRGECEETEPVQVTEDDVLDALETVLQSHMSSPATRGFALTATMKLSTRITHN
VDRIRSIVSIYGSCIDVELQQRAVEYNALFKKYDHMRAAVLERMPVIDKSSPGHTNGESA
GGTIKELEPTKLTQEIVFPQEPSNQVCDLLDLLGGSGEPFQPSPSLSSTAPGPASSTAGG
DLLDLLGGLDVTPAPPSVTVYEKNGVTLKLQTDTQTDTGMTVTLTATNSTDGDITGLTLQ
AAVPKSVQLQMKAPSGDVIPAHGLGQVTQTVLLNNPNKVSLKIRVRVCYTSQSSVCQDTV
QIDSFPSTAW
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtctccttcggtgcgtctgcaggagatgatcagggtgatcagaggagcccgtacacag
ggtgaggagcgtggtgtgatccaaagagagtgtgctgccatccgggcacagttcagacag
gctgacaatgggacccgctctcacaacttggcaaagctgctgtatgtgcacatgctgggc
taccccgcccactttggtcagatggagtgtgtgcgtctgattgcaagccctcggtacaat
gagaaacgtgttgggtacctgggtgccatgatgcttctagacgagaaacaggatgccagc
ctgctcatcactaactccatcaagaatgacctgtcccacagcagtcagtatgtccagtct
ctggctctgtgtactctggcctgtatgggctcggctgagatgtgtcgagacctggcccca
gagatcgaccgcctcctcagagcctcgaactcctacatcaagaaaaaggcagctctatgt
gcagtacacatggtgagaaaagtaccagagctaggggagctgttcacccctgcagctcga
tccctgctctctgaaaagaaccacggggtgttacatggagctgtggttctgatcactgag
ctgtgtgagcgcaacccagacactctagagcagtttcgtaaggcggtgccggagctggtc
ctgatgatgaaaggcctggtgatgtcgggctactctccagaacacaatgtggctgggatc
agtgacccattcctgcaggtgcgcattcttaggttgctgaggatcctggggcgcaataat
gacacagccagtgatgccatgaatgacctgctggcccaggtggctacgaacacagacagc
agtaagacagcaggcagtgctgttttgtatgaaactgttctcactgtcatggacatcaaa
tcagaaagtggcttgagggtcttggctgtgaacatcctggggagatttcttctgaacaat
gatcggaacatccggtatatttccatgacttcccttcagaaaattgttcagacggaccac
aatgcagtgcagcgtcacagggggaccatagtggactgcctgaaggaccaggatgcttct
gtcaaacgccgggcattggagctttctttggccctggtgtcagctgtcaacatccgctct
ctgatgaaggagcttctcctcttcctctccagctgtcccccagagctccgagcacacacc
acctcgggcatcttcaacgctgcagagaggtatgctccctctcagcgctggcacattgac
accatcctgcatgtcctcaccacggcagggggtgacgtgcgggatgagacggtgcccaac
ctgatccagctcatcaccaccgcaacagaacttcactgctacacggtccacaagctgtac
agagccctgattacagacatctcagtgcaatccctggtacaggttgcgtgctggtgtatt
ggggagtatggagacctgcttctgaggggagagtgtgaggagacagaacctgttcaggtg
acagaggatgatgtcctggacgccttggaaacggttctacagtcacatatgtcatcgcca
gcaaccaggggctttgctctcacagcaaccatgaaactcagcacacgcataacgcataac
gtggatcgcattaggagcatcgtcagcatctacggcagctgtatcgacgtggaactccag
cagagagcagtggaatataacgctctcttcaagaaatacgaccacatgagggctgcggtg
ctggagagaatgccggtgattgacaaaagctccccgggacacaccaatggagaatcagca
ggggggactatcaaagagttggagccaaccaaactgacacaggaaatagtatttccccag
gaaccttctaatcaggtgtgtgatctgttggacctgctgggtggctctggggagcctttc
cagcccagcccatccctgtccagcacagcacccggcccagctagcagcacggctggggga
gacctactggacctgctgggaggcctggatgtaacacctgcaccacctagtgttacagtg
tatgagaaaaacggtgtgactctgaaactacagactgacacacagacagacacagggatg
actgttaccctcactgccaccaactccactgacggggacatcactggcctcaccctgcaa
gcagcagtacccaagagcgtccagttacagatgaaggctccgagtggtgacgtcatccct
gcgcatggcttaggtcaggtgacccagactgtgctcctcaacaacccaaacaaggtgagt
ctgaagattagggtgcgtgtgtgctacaccagccagagctctgtctgccaggacacggtg
cagatcgactccttcccaagcactgcctggtaa
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