Oncorhynchus tshawytscha (Chinook salmon): 112235714
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Entry
112235714 CDS
T05605
Name
(RefSeq) RPE-retinal G protein-coupled receptor
KO
K04254
retinal G protein coupled receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112235714
04030 G protein-coupled receptors [BR:
otw04030
]
112235714
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112235714
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Vision
Opsin
112235714
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
112235714
NCBI-ProteinID:
XP_024259963
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All DBs
Position
LG24:complement(27119927..27128119)
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AA seq
296 aa
AA seq
DB search
MAAYTLPEGFSDFDMFAFGSALLVGGLLGFFLNAISILAYISVKQMRTPSNFLVFNLAVA
DIMLNLNGLIAAYASLFYRHWPWGQDGCSNHAFMGMTAVLASISFLATIAWDRYHQYVTS
QKLFWSTAWTISIIIWGLAIIWAAVPLIGWGVYDFEPMRTCCTLDYTKGDMDYITYMGAL
TVFYLIFPAYVMKSNYDAIHAYFKKIHKHRWNTSIPLRVLLFCWGPYEIMCIYACFGNAR
LVSPKLRMLLPVLAKTNPIFNAWLYSFGNEFYRGGVWQFLTGQKFTEPVVVKLKGR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatacacattaccggagggattctccgattttgacatgtttgcattcggttca
gctcttcttgttgggggtcttcttggattcttcctcaacgccatttcaatattggcctat
attagcgtaaagcaaatgcgaactcccagtaattttcttgtgtttaaccttgctgtggct
gacattatgctcaatttaaacggcctgatcgctgcttacgccagtttattttatagacac
tggccctggggccaagacggatgtagcaaccacgccttcatggggatgacagcagttctg
gcctctatcagtttcctggctaccatcgcctgggacagatatcaccaatatgtgaccagt
cagaagctgttttggagcacggcctggactatttcaatcattatctgggggttggccatc
atctgggcggccgtccctctgattggttggggagtttatgactttgagcccatgaggacc
tgctgcacactagactacaccaaaggagacatggactacattacctatatgggggccctg
acggtcttctacctcatcttccctgcttatgtcatgaagtccaactacgacgccattcac
gcatacttcaagaagatccacaagcacaggtggaacaccagcataccactgagggttctg
ttgttctgctggggaccctacgaaatcatgtgcatctacgcctgctttggcaatgccaga
ctggtctctccaaagctgagaatgttgcttcctgttttggcgaaaacgaaccctattttc
aacgcgtggctctattcctttgggaacgagttctacagaggaggggtgtggcagtttctg
actggccagaagtttactgagccggtcgttgtgaagttaaaaggaagataa
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