Oncorhynchus tshawytscha (Chinook salmon): 112235718
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Entry
112235718 CDS
T05605
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112235718
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112235718
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GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
ig
LRR_4
Ig_VEGFR-1-like_5th
Ig_2
fn3
VEGFR1-3_N_Ig-like
V-set
Fn3_ROS1
LRR_EndoS
UL45
LRR_14
DUF5625
Motif
Other DBs
NCBI-GeneID:
112235718
NCBI-ProteinID:
XP_024259967
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All DBs
Position
LG24:27144017..27147963
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AA seq
582 aa
AA seq
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MAATLYSVLTIALLFCRVTPGSTSCLPGCSCTNDNLGRSLLCMETAMGRIPDNVPNDFSK
IRIENSHLTELPRGSFSKVSALVSLWLNFNDITLMNIKSLEGLTNLTELRLQGNKLRSVP
WTAFQDTPNLKILDLKHNRLDVLPESALRQLPGLTYLDLSFNQLTVISRDVFLNWPLLNT
PERKEGTEPSSGETNVVLALHDNPWLCDCRLKGFVEFIKSVSPPLILMNSYLMCTGPSSR
AGKFFHEVGLKTCMKPEASASESNMTVSLGDKVTLRCLVKARPDPAIHWSYSLKIIRGFT
VSETRVDDETIRSQLVIPSLHLADRGAYTCFANNFIGNSSVSVLVNIKSFNASSSSVGAA
MSLPPFPLASADENVYIDIRISKQTVYGITLEWYAATDNPAETWFTIHLGKYHSDKKELT
YIGPGINTYSVNDLLPVTKYEVCVTLKNQMPRAGQCIVFVTGSDISQLEQREKLIHIIVI
VCAMVLAVPVGMYACTTDTRCTFSYLDRCTEQCKRRRRQEKTLRTNGERQGTFDSLQAAS
DEGLCGDSEEVMKKRSKSSDEKNNHRGKAQDLPETTTGAKLY
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccttgtattcagttttaactatagcgttgctattctgtcgagttactcct
ggatcaacttcttgtttacccggctgctcttgcacaaatgacaacttgggaagatcccta
ctttgcatggaaacagccatgggacgaatcccagacaatgttccaaatgatttcagtaaa
attcgaatagagaattctcatctgaccgaattaccccgcggctccttctctaaagttagt
gccttggtgtctctgtggttgaatttcaacgacatcaccctaatgaacatcaagagtctg
gaggggctgacgaatctaaccgaactacggctacaggggaataagctgcgttcagtccca
tggacagcgttccaggataccccgaacctgaagattttggacctgaaacataaccgacta
gacgttctcccggaatctgccctgagacaacttccaggcctgacctatttagacttatcc
ttcaatcagcttactgtcatatccagggatgtcttcctcaactggcctctcctcaacact
ccggagagaaaagaaggtacagagcccagcagtggagagaccaacgttgttttagcgctg
cacgacaacccttggctgtgtgactgccgcctcaaaggtttcgtagagtttatcaaaagt
gttagtccgcctctaattctgatgaactcgtacctgatgtgcactggccccagttccaga
gcgggaaagttcttccacgaagtcggtttgaaaacatgtatgaagcccgaggcctcagcc
tcagaaagcaacatgacggtgtcactgggggacaaggtaaccctccggtgcttagtcaaa
gccaggcctgaccccgccatccactggtcatacagcctgaagattatacggggatttact
gtctcagagacccgtgtggacgatgagaccatcagatctcagctggtcatcccatccctt
cacctggcggaccgaggcgcttacacctgcttcgccaacaacttcataggcaactcctcc
gtcagtgtcctggtcaacatcaagtctttcaacgcctcctcctcctccgttggtgccgcc
atgtctctacccccgttccccctggcctcagccgacgagaacgtctacattgacatccgc
atctccaagcagacggtctacggcatcactctggagtggtacgctgcgacggacaaccct
gcagagacctggttcaccatccacttggggaaataccactctgacaaaaaggagttgaca
tacatcgggccgggcatcaacacctattcggtcaacgacctcctaccggttactaaatac
gaggtgtgtgtaacgctgaagaaccagatgccccgcgccggtcagtgcatcgtgtttgta
acaggaagtgacatcagtcagctggaacaacgggagaagctcatccatattatcgtgatc
gtgtgcgccatggtgctggcggtgcccgtggggatgtacgcctgcaccaccgacaccaga
tgtacgttcagctacctggaccgctgtacggagcagtgtaagaggaggaggaggcaagag
aagaccctgaggaccaatggggagagacaggggaccttcgacagcctccaagccgccagc
gatgaaggactctgtggagactctgaagaggtgatgaagaagaggagtaagtcctcagat
gaaaaaaacaaccacaggggaaaagcacaagatctaccagagacaaccactggagcaaag
ctatattag
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