Oncorhynchus tshawytscha (Chinook salmon): 112235723
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Entry
112235723 CDS
T05605
Name
(RefSeq) tight junction protein ZO-1-like isoform X1
KO
K05701
tight junction protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04520
Adherens junction
otw04530
Tight junction
otw04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112235723
04530 Tight junction
112235723
04540 Gap junction
112235723
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112235723
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112235723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
ZU5
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
112235723
NCBI-ProteinID:
XP_024259973
LinkDB
All DBs
Position
LG12:62344903..62489777
Genome browser
AA seq
1897 aa
AA seq
DB search
MKYQQYITVMQMAMGVTAVNRDNCIPPKRQMWVTPTDGLSGIGATGIGTAASSAAITEAQ
DSAEAAAEDAAAARAAARAAARAGAVCGSGAIGGCSVMFATSTLSLPMTQGKPSLRRIKG
RIHRSKSLDSIDLLDSNSAAMEETVIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGET
SIVISDVLKGGPAEGLLSENDRVVMVNAVSMDNVEHAYAVQQLRKSGKNAKITIRRKRKV
QIPVSRPGDRETMSEHEEEDTDEDDGYEQHSGRSGPTSTYGAASGGTASRRTNDRERERS
NSSRREHSASRERSISPHSGRSQGSSTPSRPAKVTLVKSRKNEVEYGLRLASHIFVKDIS
PESLAARDGNIQEGDVVLKINGTVTENLSLIDAKKLIERSKGKLKMVVQRDDRATLLNIP
DMDDSIPSGNNSDRDDISEIHSLTSDHSSRSHDRARGSRSRSPTRSEPSDPSRHSPRQIS
NGSHRSRDEERISKPGVMSTPVKGSQEALIQAISDQPLAREDKLPPLPEPKPVYAQPGQP
DVDLPVSPSDAPVPSAGHDDSILSRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDS
PAAREGLEEGDQILRVNNVDFANIIREEAVLFLLDLPRGEEVTILAQKKKDVYRRIVESD
VGDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHQEVERGII
PNKNRAEQLSSVQYTLPKTPGGDRADFWRFRGLRTSKRNLRKSREDLSAQPVQTKFPAYE
RVVLREAGFLRPVVIFGSIADVAREKLAREEPDLFELAKTQQHEGVEKSEPKDAGKDQRG
SGIIRLHTIKQIIDRDRHAVLDITPNAVDRLNYAQWYPIVVFLNPDSKQGVKTMRTRLCP
ESRKSARKLYERALKLRKNNHHLFTTTINMNNMNDGWYGALKETIQQQQNQLVWVSEGKA
DGAPDDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYEDTDTEGGAYTDQELDETLNDE
VGLPTEPAITRSSEPVREDPPVIQEPMRYGGYQHTVQPDPLNRIDPAGFKAPVAQQNEKA
EAVPATMPILPQQPEQPVLLAETEAAPPAVNKTVNGVAGLSHGLSLGPIAAPQSKPNPGP
GPEADRLRMPTPDLAQPLAPAPTLEPEPLQSGPPSSEPQMYKKDPYLEEPVRVNQGGVKP
SPAMGPPMTYESQPPYQDQHPYRDYDHPPNRYDGGGYLEPKYRNFDSQLHHEKNVPHYDD
QWPPYNQQTSGTPPHQQQHPPGPGYDPRLSYEDGPERDSPPQPRYDENPLGYNGRPRYGK
PAGPGTIRYDEPPPSVPGGYAPLRYDQEPHPYPPATRSPEPPKQYYQGEPAQRSGPGPAY
NQATPQHRGYKPPSQQYEPIMNFDAPVPAPKPQPEALRPSPGDTVITTAPNPLPPPPRVE
LEDDPAIRAQSVLSRVKMFENKRSVSVDRAKEAGDTVGPRSADLPTKPGACIPKANSLSN
LDQEKSFRVPEPQKPREVSDDDIVRSNHYNPDEDEEYYRKQLAYFDRRSLDAGKAPQTTP
VIATKPAAQPQAHPGYNYPRAESVEKVSPVERRYEPVPQVTPAAPPAILPKPTSPEADTV
TTNYLPQKSYPEKSPVNGTAMKDQPKAPANTSYNRYVPKPYTNSAKPFERKFDSPKFNHN
LLPNNKTDLTPAIKAPANSTAPAKHQISPQPTDMDSGLDTFTRTMDNRSKYQHNNINAVP
KAIPVSPSALEDDDEDEGHTVVATARGVFNCNGGVLSSIETGVSIIIPQGAIPEGVEQEI
YFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALK
SSDSSSGDPKSWQNQSLPGDPNYLVGANCVSVLIDHF
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgaagtaccagcaatacataacggtgatgcagatggctatgggggtgactgccgtcaac
agagacaattgcatccctcctaagagacagatgtgggtgactcccacagatggattgtca
gggataggtgccacggggataggcaccgcggcttcatccgctgccattacggaagcgcag
gattcagcagaagcagctgcagaagatgctgcagctgctcgtgccgctgctcgtgccgct
gctcgtgcaggtgctgtgtgtggttctggtgctataggaggatgcagtgtaatgtttgcc
acctccacactctcgctccccatgacccagggcaagccctccctccgcaggatcaagggc
cgtattcaccgcagcaagagcctggacagcatagacctgctcgactccaatagtgcagcg
atggaggaaactgtaatatgggaacagcacacagtgacccttcacagggccccagggttt
gggtttggcatagccatctcagggggccgggacaaccctcacttccagagtggtgagact
tccattgtcatctccgacgtcctgaagggaggcccagcagaaggactcttatcggaaaat
gaccgtgtggtaatggtcaacgcagtgtccatggacaacgtagagcatgcatacgcagtg
cagcagcttcggaagagtggaaagaacgcaaaaataacgatccgaagaaaacgaaaggtt
cagatcccggtgtctcgcccgggggacagggagacgatgtccgagcacgaggaagaggac
actgatgaagacgatggttacgagcagcacagcggccgcagcgggcccaccagcacctat
ggcgcggcgagcggcggcacggccagcaggcggacgaatgaccgcgagcgtgaacgcagc
aatagcagccggcgggaacacagtgcctcgcgagagaggagcatctcaccccactctggc
cgatcccaaggctcctctacaccgtcccgccccgccaaagtcacccttgtcaagtcccgc
aagaatgaagtagagtatggtctgcgtttggccagccacatctttgtgaaggacatctcc
ccagagagcctggcagcacgggacggaaacatccaggagggagacgtggtgctgaagatt
aacggcacagtgaccgaaaacctgtcattaatagatgctaagaagctgatcgagaggtca
aagggcaagttaaagatggtggtgcagagagacgacagagccacgttgctcaacatcccc
gatatggacgacagcattccctccggcaacaactccgaccgagacgacatttcggaaatt
cattcactgacctcagaccattcctctcgatcccatgatcgagcacggggcagtcgatcc
cgctcccctacccggtctgagccctcggacccctcccgacactcaccacggcagatcagc
aatggcagccacagaagtcgagatgaggagaggatttccaagcccggggtgatgtcgact
cctgttaaaggttcccaggaggccctaatccaggccatcagcgaccagccactggccaga
gaggacaaactgcccccgctgccagaaccaaagccagtgtatgcccagcctggccagcct
gatgtggacctgccagtcagcccctctgacgccccagtgcccagcgctggtcatgatgac
agcatcctcagcaggccgagtatgaagctggtgaagtttaagaagggggagagtgttggc
ctgaggctggccggagggaacgacgtgggcatctttgtagccggagtcctggaggacagc
ccagctgccagggaaggtctggaggaaggagaccagattctcagggtaaacaacgtagac
tttgctaacatcatccgagaggaggctgtgctgttcctcctagaccttcccaggggtgaa
gaggtcaccattctggcccagaagaagaaggatgtttaccgtcggatagtggagtcggat
gtgggcgactcgttctacatccgaacccactttgagtatgagaaggagtctccgtatggc
ctgagcttcaacaagggagaggtgttccgtgtagtggacaccctctacaacggcaagctg
ggctcctggctcgccatacgcattggcaagaaccaccaggaggtggagagaggcatcatc
cccaacaagaacagggcagagcagttgtccagtgtgcagtataccctccccaaaacgcca
gggggtgacagggctgacttctggaggttccgtggtctgcggacctccaagaggaacctg
aggaagagcagagaggacctgtctgcccagccggtccagaccaagttccctgcctatgag
agggtggtgctgagagaggctgggttcctaaggcctgtggtgatctttgggtccatcgca
gacgtggcacgagagaagctggccagagaggagcctgacctgtttgagctggccaaaaca
cagcaacatgaaggagtggaaaagagtgagcccaaagacgcaggaaaagaccagcgaggc
tccgggatcattcgcctccacaccattaaacagatcattgaccgggaccggcatgctgtg
ctggacatcacccccaacgctgtggaccgtctgaactacgcccagtggtaccccatcgtg
gtgttcctcaacccagacagcaagcagggcgtcaagaccatgagaaccaggctgtgcccc
gagtccaggaagtcagccaggaaactctacgagagagccctcaaactgaggaagaacaac
caccacctcttcaccaccaccattaacatgaataatatgaatgacgggtggtacggtgcc
ctgaaggagaccattcaacagcagcagaaccagctggtgtgggtttcagagggaaaggcg
gacggtgctccagatgatgacctggatctgcatgatgaccgtctgtcgtacctgtcggct
ccgggcagtgagtactccatgtacagcacggacagccgccacacctccgactacgaggac
acggacacagagggcggggcctacaccgaccaggaactagacgagacgctgaacgacgag
gtgggcctgcccactgagcctgccatcacccgctcctcggagcccgtccgagaggacccg
ccagtcatccaggagcccatgaggtacggcgggtaccagcacacagtgcagcccgacccc
ctgaaccggatcgacccagccgggttcaaggcaccagtggcccagcagaatgagaaagca
gaggctgttccggccaccatgcctatcctccctcagcagcctgagcagcctgtgttactg
gctgagacagaggcagcgccccctgctgtcaacaaaactgtaaatggtgtagcgggtttg
agccatggtttaagccttggccctatcgctgctccccagagcaaacccaacccaggcccc
ggccccgaggctgacaggcttaggatgcccacccctgatctagctcagcccctggccccg
gccccaacgctcgaacccgaacccctacaatccggaccgcccagttcagaaccacagatg
tacaagaaggatccctacctggaggagccagtcagagtgaaccaaggtggtgtaaagccg
tctccggcgatggggccgcccatgacctacgagtcccagcctccgtaccaggaccaacac
ccgtacagagattacgatcacccgcccaaccgctacgacgggggtggctacctggaacca
aagtatcgtaacttcgactctcaactgcaccacgagaaaaacgtgcctcactacgatgac
cagtggcctccatacaaccagcagacctctggcacaccaccccaccagcagcagcacccc
cctgggcctggctacgacccccggctgtcctatgaagatggacccgagcgagacagcccc
cctcagccgcgctatgatgagaacccgctgggctacaacggacgacctcgctacggcaag
ccagcaggaccaggaaccatccgctacgatgagcctcctccatccgtcccagggggctac
gctcccctacgttacgaccaggagcctcacccgtatccccctgcaacacgctctccagag
cccccgaaacaatactaccagggggagcctgcccagcggtcaggacctggtcctgcctac
aaccaggcaacaccacagcaccgaggctacaagcccccatcccaacagtatgaacccatc
atgaactttgacgccccagtgcccgcacccaaaccacaaccagaggctctccgtccctca
cctggggacacggtgatcactacagcccccaatccccttccccctccccccagagtggag
ctggaggacgacccggccataagggcccagtcggtgctgtccagggtcaagatgtttgag
aacaagcgctctgtgtctgtggaccgagccaaggaggcaggagacaccgtcgggcccagg
tcagcagatctgcccaccaaaccaggcgcgtgcattcctaaagccaactcgctcagcaat
ctggaccaggagaagtcgttcagagtccctgagcctcagaagccccgtgaggtgtccgat
gatgacatagtgcgctctaaccactataatccagatgaagacgaggagtactataggaaa
cagctggcctactttgaccggcgaagcttagacgcaggcaaggcccctcagacaacacct
gtcatcgcaaccaaacctgctgctcaaccacaagcacatcccggatacaactaccccagg
gcagagtccgtggagaaggtcagtcccgtggagaggagatatgaacctgttccccaggtt
acccctgctgccccacctgccatactgcccaaacccacctcacctgaggcagacacagtc
acgaccaactacctaccccagaagagttaccctgagaagtctccagtgaacggtacggca
atgaaggaccagcccaaggccccggccaataccagctacaaccgctacgtccccaagccc
tacaccaactccgccaagcccttcgagaggaagtttgacagccccaagttcaaccacaac
ctgctgcccaacaacaaaacagacctgaccccagccatcaaggccccagccaacagcaca
gccccagccaagcaccagatctccccccagcctacagacatggactcaggcctcgacacc
ttcacacgcaccatggacaacaggtccaagtaccagcacaacaacatcaacgctgtgccc
aaggccatccctgtcagccccagtgctctggaggatgatgatgaggatgaaggtcacacg
gtggtggccacggcccggggggtcttcaactgtaatggcggggtgctgagctccatcgag
acgggtgtcagcatcatcatcccacagggggccatccccgagggcgtagaacaggagatc
tacttcaaagtctgccgggacaacagcatcctgccccccctggacaaggagaaaggagag
accctgctcagcccgctggtgatgtgtggccctcacggcctcaagttcctgaagcctgtg
gagctgcgtttacctcactgtgcgtctatgaccccagatggttggtcttttgctctaaaa
tcctccgactcctcgtcgggtgatcccaagagttggcagaatcagtctctccctggagac
cccaactacctggtgggagccaactgtgtgtctgtgctcatcgaccacttctga
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integrated database retrieval system
