Oncorhynchus tshawytscha (Chinook salmon): 112235750
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Entry
112235750 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 39 isoform X1
KO
K20649
Rho GTPase-activating protein 39
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235750
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112235750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
MyTH4
WW
Motif
Other DBs
NCBI-GeneID:
112235750
NCBI-ProteinID:
XP_042160076
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All DBs
Position
LG22:complement(36230010..36395135)
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AA seq
1099 aa
AA seq
DB search
MAETSCDWVEILEPRSQERMYVNLASGECGWEPPPGAAVRQSDGSQWWELFDSHNKRFYY
YNSASQQTVWHRPQACDIVPLAQLQAMKRSSETGLRGPIKPQRGGGGGEGRRAALPNQAY
PMPPAQDPDSSGRSTPSKGLCDSLENSNDTPRDPGQRWQPAPGSKAAMLVKVNSIGRNQS
VVPTSTQHLNTLSPGSPAVYQVHSDRPSPRPISSPAGKMAAPVDHKQAFHLKKGDNGNFG
LVMPSTGTQVYQTPQRCQAGTPQPSSPHYGATPPIYDEPPMETPIYDEPPMEVEGAALLN
RSSTPTTSLQRVRQPQTQTHHQTQQQPKLLQYPASHLASKHKRNPSATEYSPAGRECIKH
MVNVDPATCKQSPLSHPIQIEQAPALDPDLPPSPSPCPVVNQPRPKEVSLEKKQSWRLLE
TSVRKNMDVRHSRQNSVASQEYPAPAAVTHQDSGYSTGPSPSLRRKNRRRALGGGAGGTG
QGRPGSVGSSGELSALNEKLMAEMRVVVSRSNTLRGSKASLDTEMSDSSVPRTRSPLGSP
KKYRGRSASREDISASNHSLYRTGSGSTHGDVPLSPLASEGMVRQKRTYEKVDTLEKSII
SQNSLSSSEPHMSLSQAGTLDSKAQSEISSQGGGNGHRGTPHGVKVTGDRRGGGGGGGSV
GYQYPYTTLCKPPPDTNMVDWASKNLNLHTQGLFRRRVSIANMLSWNRGSIKKPMLITSD
RTVKKEACEMFKLIQGYMGDRPARLERRHTALLVVTKCWGMQALRDELYVQLVRQTTDNL
SLRSLEAGWEFMAISLSFFSPSPKFRSYLEGYIQTHLEPSNDKKIMQHIMEQQDMKTKKN
SKSRKKRKQNNEEEEEGLPISTYAKYCYRKLQKVAVTGGKKGLRKPTLEELDQGRNAIVT
PSLFGSALEEIMERQSELFPERRLPWVQVQLSQCVLALGGAQTEGIFRVPGDIDEVNALK
LQVDQWNIPENLGDPNVPASLLKLWYRELEEPVIPQSFYQQCISNYEDPEAAIRVVQSLP
ELSRLVLCYFIHFLQVFAQPVNVSKTKMDVNNLAMVMAPNCLRCQSDDPRIIFENTRKEM
SFLRMLIVHLDTSFIKGLL
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggccgagacaagctgtgactgggtggagatcttggagccacgctcgcaggagcgcatg
tacgtgaacctggcctcgggggagtgtggttgggagccccccccaggcgccgccgtgcgc
cagtccgatggcagccagtggtgggagctgtttgacagccacaacaaacgcttctactac
tacaacagtgccagtcagcagacggtgtggcaccggcctcaggcctgcgacatcgtgccc
ctggcccagctacaggccatgaagaggagctctgagacgggtctgaggggccccatcaag
ccccagagagggggaggaggaggggagggccgccgcgcagccctacctaaccaggcctac
cctatgccccccgcccaggaccctgacagcagcgggaggtccaccccctctaaggggcta
tgtgacagcctggagaacagtaacgacacccccagggacccaggtcaaagatggcagcct
gctccgggatcgaaggcagccatgttggtgaaggtgaacagcattggcaggaaccagtcc
gtggtgcccactagcacccagcacctcaacactctcagccctgggagccctgctgtgtac
caggtccactcagacagacccagccccagacccatatccagccctgcaggcaagatggct
gcccctgtggaccacaagcaagccttccacctgaagaagggagacaacggtaacttcggc
ctggtgatgccctccactggcacccaggtctaccagactccacagaggtgtcaggctggc
accccccagccctcctcgccccattacggtgccactccgcccatctatgatgaaccaccc
atggaaacacctatctatgatgagcccccgatggaggtggagggggccgccctcctgaat
aggtcctccaccccaaccaccagcctgcagagggttcgccaaccccagacccagacccac
caccagacgcagcagcaacccaagctgcttcaatacccagcctctcacctggcctccaaa
cacaagaggaatccctccgccacagagtacagccccgctggacgggagtgcatcaaacac
atggtcaacgtggaccctgccacctgcaagcagagccccttatcccatcctatccagata
gagcaggcccctgctctagaccctgacctgcccccctctccatccccatgcccagtcgtg
aaccagcccaggcccaaggaggtgagcctggagaagaagcagtcgtggcgtctcctggag
accagcgtgaggaagaacatggacgtccggcacagccggcagaacagtgtggcgtcccag
gagtacccagcgccggccgccgtcacccaccaggactccggctactccaccgggccctcg
cccagcttgaggaggaagaaccgtcggagagccctgggagggggtgctgggggaacaggg
cagggccggccaggctcagtgggcagcagtggggagctcagtgccctgaatgagaagctg
atggcagagatgcgggtggtggtgagtcgatctaacaccctgcgtggcagcaaggccagc
ctggacactgagatgtctgacagctctgtacctcggacccgttcccccctgggttccccg
aagaagtacaggggccgcagcgcctcccgagaggacatcagcgccagtaaccactctctg
taccggaccgggagcgggagtacccatggcgacgtgcccctctcgcccctggcgtcggag
ggcatggtgcgtcagaaacggacctatgagaaggtggacactctggagaagagcatcatc
agccagaacagcctgtcctcctcggagccccacatgtccctctcacaggcaggaacactg
gactccaaggcccagtcggagatctcgtcacaaggcggaggtaatggacacaggggcacc
cctcatggcgtcaaagtgactggagacaggaggggaggtgggggaggaggcggcagtgtg
ggataccagtacccttacaccaccctctgtaaacctcctccagacaccaacatggtggac
tgggccagtaagaacctgaaccttcacacgcagggcctgttccgccgccgcgtctccatc
gccaacatgctctcctggaacagaggctccatcaagaagcccatgctgatcaccagcgac
cgcaccgtcaagaaggaggcctgtgagatgttcaagctgattcagggctacatgggggac
cgtccggcccggctggagcgccgtcacaccgccctgctggtggtcactaagtgctgggga
atgcaggccctgagggatgagctgtacgtccagctggtcagacagaccactgacaacctg
agcctgaggagcctggaggctggctgggaattcatggccatcagcttgtccttcttctcc
ccctcgcccaagttcagaagctaccttgaggggtacatccagacacacctggagccctcc
aacgacaagaagatcatgcagcacattatggaacaacaggacatgaagaccaagaagaat
tcaaagtcccggaagaagaggaagcagaacaacgaggaagaagaagagggcctgccaatc
agcacttatgccaagtactgctaccgcaagctgcagaaggtcgccgtcactgggggcaaa
aagggtctgaggaagcccaccctggaggagttagaccaggggaggaatgccatcgtgacc
ccttccttgttcggcagtgccctggaggagatcatggagcgccagagcgagctgttcccg
gagcgtaggctcccctgggtgcaggtgcagctttctcagtgcgtgctagccctgggaggg
gcccagacagagggaatcttcagggtgcctggagatattgacgaggtgaatgcgctgaag
ctgcaggtggatcagtggaatattcccgaaaaccttggggaccccaatgtcccggcgtct
ctgctgaagctgtggtacagggagctggaggagccagtcatccctcagagcttctatcag
cagtgcatcagtaactatgaggatcctgaagcagctatcagagtggtacagtctctgcct
gaactcagcagactggtgctctgctactttatacacttcttacaggtgtttgcccagccc
gtcaatgtgagtaagaccaagatggacgtgaataacctggccatggtaatggctcccaac
tgtctccgctgccagtcagatgacccacgcatcatctttgagaacacgaggaaggagatg
tccttcttacgcatgctcattgttcacctggacaccagcttcatcaagggcctcctctga
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