Oncorhynchus tshawytscha (Chinook salmon): 112235753
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Entry
112235753 CDS
T05605
Symbol
igdcc3
Name
(RefSeq) LOW QUALITY PROTEIN: immunoglobulin superfamily DCC subclass member 3
KO
K22654
immunoglobulin superfamily DCC subclass member 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112235753 (igdcc3)
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
PUNC
112235753 (igdcc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
Ig_C17orf99
Sp38
Pur_ac_phosph_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
112235753
NCBI-ProteinID:
XP_042176906
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All DBs
Position
LG04:complement(60474926..60582713)
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AA seq
784 aa
AA seq
DB search
MATRRLCLVPCIFGLLLNALVGVTSGAELSFTLEPSDIIAVQEQPLMLHCQVDGIPPITT
QWRRNGILLVDDQYYTMFHNGTLLIGRFQRTKSDGSTDEGDYECVGQNSFGLVVSRRARV
QAATMAEFHVQPRSVRAEEAGVGRFQCQIHGLPEPAISWEKDGRSVDTKDERYTLLPTGV
LQITGLRQEDSGVFCCVAHNSAGVKHSAGARLTVSVSQSSVYKEPMILVGPENLTLTVHQ
TAILECVATGYPRPIVSWSRLDGRPIGVEGIQVLGTGNLMITDVGVQHSGVYVCAANKPG
TRVRRTAQGRLVVQAPAEFVQPPQSISRPVGTTAIFTCQAQGDPVPQLTWLKNGQILEPG
GHVKLRNNNTTLTIYGISQEDEAIYQCIAENSAGSTQASARLTVLWADGLPGMPSVVRAE
ALSPNAIQVSWKESAQNTQEIIGYVLHIRRTTDPVEMEYQEAVSKVTLQQVVGDLEPSTG
YTFYVKAYTSRGASKPSESATESTLGEVPAPPSLFIKLVNSSVVQAVWEPSSKMGQHEGF
RLYYRRVHTPLFTGPLTFTRNVTQYNITQLDPTLVYEIKVLAFNQHGDGNATMRFVSLKE
AVEKSVLNTPCDCLKDEQSKTSTAGIIIGIHIGVTCIVFCVLFLMFSYRGRLMTCKTVQA
TPQAGRNISLQSSSSSQGALALNGVSRSGMEGNGSLAGKSRGDSNELERLFSGPSHCGDL
ADSSRMLDKSLVSCALNETQLSTLPLDDFSLVEEDRETQFQRPPAEGRGASDRAVAGVTQ
QDQT
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggctaccagaaggctctgccttgttccatgcatttttggattactcctcaacgcttta
gtcggtgtgacatcgggagcagagctctccttcaccctggagcccagtgacatcatcgcg
gtgcaggagcagcccctaatgctgcactgtcaggtggacggtatcccaccaatcaccacg
cagtggaggaggaatggaatcctcctggtggatgaccaatactacaccatgttccacaac
ggcactctgctgattggacgcttccagaggaccaagtctgacggctcaactgatgaaggg
gattatgagtgcgtgggccagaactcctttggtctggtggtgagccgcagggccagggtg
caggccgctacgatggcagagttccatgtccagccgcggtcggtgcgtgcggaggaggcg
ggcgttgggcggttccagtgccagattcacggcctgcctgagcctgccatcagctgggag
aaagatggccgctccgtggacactaaggatgagaggtataccctgctccccactggtgtt
ctgcagatcaccggtctgcgtcaggaggatagtggtgtgttctgctgtgtggcccacaac
agtgcaggagtaaagcacagtgccggggctcgcctcaccgtctcagtctcccagtcttct
gtttacaaagagcccatgatcctcgtgggtcctgaaaacctcactctcaccgttcaccag
acggccatcttggaatgtgttgctacaggatatccccgccccatcgtgtcatggagcagg
cttgatggccgtccgataggtgtggagggcatccaagtgctgggtacagggaaccttatg
atcacagatgtcggggtccagcactctggcgtctacgtctgcgctgccaacaaaccaggg
acccgtgtacgcagaaccgctcagggacgtctggtggtccaagccccagcagagtttgtg
cagcctccccagtccatctcccggccggtgggcaccactgctatcttcacctgccaggcg
cagggtgaccctgtgccccagctcacctggctgaagaacgggcagatcctggagcctgga
ggtcacgtcaagctcaggaacaacaacaccacgctgaccatctatggcatcagtcaggag
gacgaagccatctaccagtgcatcgctgagaacagcgccggctccacccaggccagtgcc
cgtctcaccgtgctgtgggcagacggcctgccagggatgcctagtgtggtgcgggccgag
gccctctcacccaacgccatccaggtgtcctggaaggagtctgcccagaacactcaggag
atcatcggctacgtgctccacatccgcaggaccacagacccagtggagatggagtaccag
gaagccgtcagtaaggtgacactacagcaggtcgtgggtgatctggagccctccaccggc
tataccttctatgtgaaggcctacacgtcccgcggagccagcaagccctccgagagcgcc
accgagagcacactcggcgaagtgccagcacccccgtcactgttcattaaattggtgaac
agcagtgtggtgcaggccgtgtgggagccatcctctaagatgggccaacatgagggcttc
aggctgtactacaggagggtccacacccccctcttcaccggaccactcaccttcacccgc
aacgtcacccagtacaacatcacccagctggatccaaccctggtgtatgagattaaggtt
ctggccttcaaccaacacggagacggcaacgccaccatgcgcttcgtctcactgaaggag
gctgtggagaaatcagtgctgaacaccccctgtgactgtctgaaggatgaacagagcaag
acctctacagccggcatcatcatcggcatccatataggagtcacctgcatcgtattctgc
gtgctcttcctcatgttcagctacagggggaggttgatgacgtgtaagacagtgcaggcc
accccccaggccgggcgtaacatttccctacaatcgtcgtcctcctcccagggggccctg
gccttaaacggggtgagcaggtcaggcatggaagggaacggcagccttgctgggaagagc
aggggagacagtaacgagctggagagactcttctcaggcccgtcccactgtggagaccta
gcagacagttcacgcatgttggataagtccctggtgtcctgtgcgctgaacgagacccag
ttgtccactctgccgttggatgacttcagccttgtggaggaggacagagagacacagttc
cagaggcctccagcagagggccggggggccagtgacagggctgtggccggggtcacccag
caggaccagacctga
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