Oncorhynchus tshawytscha (Chinook salmon): 112235802
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Entry
112235802 CDS
T05605
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235802
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112235802
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
112235802
NCBI-ProteinID:
XP_024260089
LinkDB
All DBs
Position
LG33:14578141..14659906
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AA seq
917 aa
AA seq
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MSMQVLHMVRELVSPSRRRAAARYGASGTEQDAVLRLEQERAEIVSKYDKGKEGATVEPW
EDASFHLYKVIDRFGFVHENELPSYDSVEEKQKHLEVERTSKWLKMMKSWDKYKNSEKLV
RRIYKGIPLQLRGEVWCLLLDVPKIKEEKKDFYEKLKLRARGLSPDVRQIDLDVNRTYRD
HVMFMTRYDVKQQALFHVLTAYSVYNTEVGYCQGMSQITALLLIYMNEEDAFWALVKLLS
GQKHAMHGFFIPGFPKLMRFQEHHDRILKKMMPKLKSHLDTQEVFTSLYTMKWFFQCFLD
RTPFTLTLRIWDIYILEGERVLTAMSYTVLKLHKKHLLKLSMEDLVEFLQVTLAKDFFFE
DDFVIEQLQNNMVELRRSKLELAAPGKEDEYPKKLLGQLPPEPAVNQNHVANGQSHAQPA
EPPKAPSPSPERQRDSRPPSRARRDSLEKLVRQHKAEKREARSRGSGENSVHLDPHCKKP
SAPTLSTPERGFTPSPAPSPSPHPNPPTKVVDRGKPQNHATANHNSNAASSSSRKDIAPR
WVKPSETKLEAAKAAAAREIQPSSSPDDTLLLNRRPRSRGLIPGSNRGSNASQYDNVPGG
AEQDFVEVLELDRPPSQMRRSETPSLPPTHIPSLQGSMVSIGPVGRQAKHPIPAALSLNS
PAGGKPYVHPNGQSQYHTPPQQYSPGRPAMVPLHYPPYSVSLEQRGLGEDRHYGPPPSRG
TPPMGLMYGERAYVTTQRPSHSPEKALMNNSYATTHRQPPSSAQPPRTIQQLDSPGSNAS
TYLRQPTRLTSTAAAYPVYPPVDYNRYEGRRRGEQTPPYLPEGPGRGGAAEVQPWRQQEG
GDMSRAPGGVPRSPSFQRAQMSPVQEFTFPDGLAHYRTQFHEQQQQPTMRQQLPPLFGGP
HYRHAPEAFTMQESMLL
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcaggtgcttcatatggtcagggagctggtgtctccctcccgacgcagagca
gccgccagatacggagcgtctggtacagagcaggatgctgtgctgaggcttgagcaggag
agggctgagatcgtctccaaatatgacaagggaaaagagggcgccactgtggaaccctgg
gaggatgcaagcttccacctgtacaaagttattgaccgcttcggcttcgtacatgagaat
gaacttccgtcctacgactcggtggaagagaagcaaaaacacttagaggtagaaaggacc
tcaaaatggctgaagatgatgaagagctgggacaagtataagaacagtgagaagctggtg
aggcggatctataagggaattcccctacagctccgaggagaggtgtggtgtctgctcctt
gacgttcccaaaataaaggaggagaagaaagacttctacgagaagctgaagctcagggct
cgaggtctgtctcctgacgtccgtcagattgacctggatgtgaacagaacctacagggac
cacgtcatgttcatgacccgctatgacgtcaagcagcaggctctgttccacgtcctaaca
gcctactccgtgtacaacacggaggtggggtactgccagggcatgagtcagatcactgct
ctgttgctcatctatatgaacgaagaggatgccttctgggctctggtcaaactgctgtct
ggacagaaacacgccatgcatgggttttttatccccggcttccccaagctgatgcgcttc
caggagcaccatgaccgcatcctcaagaagatgatgcccaaactgaagtcacacctggac
acacaggaggtgttcaccagcctgtacactatgaagtggttcttccagtgtttcctggac
aggacccccttcaccctgaccctgcggatctgggacatctatatcctggagggagagaga
gttctgaccgccatgtcctacacggtcctcaaactgcacaagaagcacctgttgaagctg
tctatggaggatctggttgagtttctgcaggtgactctggccaaggacttcttctttgag
gatgactttgttattgagcagctgcagaacaacatggtggagctaaggaggtccaaactg
gagctggccgcaccaggtaaagaggacgagtatcccaagaagcttcttgggcagcttccc
ccagagccagcggtgaaccagaaccacgtggcgaatggtcagagccacgcccagccggcc
gagcccccaaaagcgcctagcccctcccccgagcgccagcgggacagccgaccccccagt
cgggcgcgcagggactccttggagaagctggtccggcagcacaaggctgagaagagggag
gccagatcacgggggtctggagagaactccgtccacctagacccccactgcaaaaagccc
tccgcccccaccctttctaccccagagagagggttcacaccgtccccggcaccctctccc
tcgccacaccccaaccctcctacaaaagtggtggacagagggaagcctcagaaccacgcc
acggccaaccacaactccaatgccgcctccagcagctcccgtaaagacatcgccccgcgc
tgggtcaagccctccgagaccaagctggaggcggccaaggcagcggcggccagggagatc
cagccctcctccagccctgatgacaccctgctgctcaaccgccggccccgctccaggggc
ttgatcccaggctccaaccgtggctccaacgcctctcagtacgacaacgtgcccgggggg
gcagagcaggactttgtggaggtcctggagctggacaggccaccgtcacagatgaggcgc
agcgagacaccgtccttaccccccacccacatccccagcctgcaagggagcatggtctcc
ataggaccagtgggtaggcaggccaaacaccccatccccgctgccctgtccctcaacagc
cccgcggggggtaaaccctatgtccaccccaacggccagagccagtaccacacacccccc
cagcagtactcccccggtcggcctgctatggtgccactccactaccctccgtacagtgtg
agccttgagcagaggggactgggagaggacaggcactacggccccccgccctcccgaggc
accccacctatgggtctgatgtatggggagagggcgtacgtcaccacccagcggcccagc
cactctccggagaaggccctcatgaacaactcctatgccaccacccacaggcagcctccc
agctcagcccagcccccccgcaccatacagcagctggacagccctggtagtaacgcctcc
acatacctgcgccagcccacacggctcacctccactgcagccgcctatccggtgtaccct
cctgttgactataacaggtacgaggggcgcaggagaggggagcagaccccgccctacctg
cccgaggggccaggccggggaggggcagcagaggtgcagccgtggaggcagcaggaaggt
ggtgacatgtcacgtgcccctggaggtgtaccccgctcccccagcttccagagggcccag
atgtcccccgtgcaggagttcaccttccctgacggcctggctcactacaggacacagttc
cacgagcagcagcaacagcccaccatgaggcagcagctccccccgctgttcggaggacca
cactacaggcacgcaccagaggcgttcaccatgcaggagtctatgttactgtga
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