Oncorhynchus tshawytscha (Chinook salmon): 112235825
Help
Entry
112235825 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: WASH complex subunit 5-like
KO
K18464
WASH complex subunit strumpellin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112235825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235825
Membrane trafficking [BR:
otw04131
]
Protein recycling
Others
WASH complex
112235825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
Motif
Other DBs
NCBI-GeneID:
112235825
NCBI-ProteinID:
XP_042171366
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MVDFLAENNLCGQAVLRIVSXGNAIIAELLRLSEFIPAVFRLKDKSDQQKYGDIICDFSY
FKGPEYYDSKLEAKPDLQDLDDEFRENNLEILSRFYLAFESVHKYIVDLIRYLDDLYEGV
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKMEGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGYSSQSGAKRPANYPESYFQRVPISSTFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVCLYFIPSILQTQQAKMREIVDKYFPDNWVISVYMGITVNL
VEAWEPYKAAKIALNYTLDSANIREQASRYSVSMEGLRPQIQQLLKEGFLREEIVLDNVP
KLLNCLRDCNVSIRWLMLHTADSAYDPNNKRLRQIKDQVINDSKYNPKILFQVLLDTAQF
EFTLKEMFKKMLSEKQLKWESYRTEGSERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQIESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQIIDSFTSIMQESIRVNPSMVTKLRATFLKLASALDLPLLRI
NQANSPDLLSVSQFYSGELVTYVRKVLQIIPESMFTSLAKIIKLQIHAIMEVPTRLDKDK
LKDYAQLGARYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVRRVAY
ALHKGLIFNPKAKTSELMPKLKEMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNSFLRTKIQDWQSVYQSTHIPIPKFPAVDESATFIGRLCREILRITDPKATCYM
DQLNTWYDLKTHQEVTNNRLFSEIQDTLGTFGLNGLDRLLCFMMVKELQNFLSVFQKTIL
RDKAMVDVFKAMLSAVNPVKGIVANASKGYANAVAKTQKIWGPYLESIMKVGQMQILRQQ
IANELNYSCKFDSKHLAAALENLNKSLLADIEAHYQDPSLPYPKEDNNLLYEITASLEAA
GIHNPLNKIYITTKRLPYFPIVNFLFIIAQLPKLQYSKNQGMTCRKATDPVDWSPLVLGL
LTLLKQFHSRYTEQFLALIGQFIRSIMEQCTSQKIPDMPSDVVGALMFLEDYVRYTKLPR
KVAEAHVPSFIFDEFRTVL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtggatttcctggcggaaaacaacctgtgtggtcaggcggtgctgaggatcgtgtcc
ncgggaaacgcgatcatagccgagctcctccgcctctcggagttcatccctgctgtcttc
agactcaaagacaagagcgaccagcagaaatacggagacatcatctgtgacttcagctac
ttcaagggtccagagtactacgacagtaagctagaagccaaaccagatctgcaggatctg
gacgatgagttccgtgagaataacctggagatactctcacgattctacctggcgtttgaa
agtgtccacaagtacatcgttgatctaatcaggtatctggatgatctgtatgaaggagtt
tacattcaacagaccctggagacggtgctgctgaatgaggatggaaaacagctcctgtgt
gaggcgctgtatctctatggagtcatgctgttggttattgaccagaagatggagggggag
gtcagagagaggatgctggtgtcctactatagatacagtgctgcccgctcctcagcggac
tctaacctggatgacatctgtaagctgctgcggagtactggctactccagccaatcaggg
gccaagcggccagctaactaccccgagagctacttccagagagtacctatcagttctacc
ttcatcagcatggtgatcgggaggctgcgctctgatgacatctataaccaggtgtctgcg
taccctctgcctgagcatcgcagcacagcgttggctaaccaggctgccatgctgtatgtc
tgtctctacttcattccctccatacttcagactcaacaggccaagatgagggagatagtg
gacaagtacttccctgataactgggtcatcagtgtctacatgggaatcactgtgaatctg
gtggaggcttgggaaccgtataaagctgccaagatcgccctcaactacaccctggactca
gccaatatcagagagcaggccagtcgttattcagtcagcatggagggcctgaggccacag
atccagcagctgctgaaggaagggttcctgagagaggagatcgtcctggataacgtccct
aagctgctcaactgtctccgggactgtaacgtttccatacgctggctgatgctacacact
gcagactccgcctatgatcccaacaacaagcgtctgcgccagatcaaagaccaggtgatc
aacgactccaagtacaaccccaagatcctgttccaggtactcctagacaccgcccagttt
gagttcaccctcaaagagatgttcaagaagatgctgtcagagaagcagctgaaatgggag
agttatcgaactgagggatctgagaggatgaccgagctggctgaggtcttctctggggtc
aagcctctaaccagagtggagaagaatgagaacctgcaggcatggttcagggagatctcg
aagcagatcgagtctctgaactacgaggactccaccgctgcaggcaggaagaccgttcag
ctgatacaggccctcgtagaggttcaagagttccaccagttggagtccaacctgcaggtg
tgtcagttcctggctgacaccaggaagttccttcaccagatgatcaggactatcaacatc
aaggaggaggttctgatcaccatgcagatagtaggagacctgtcttacgcatggcagatc
atagacagcttcacgtccatcatgcaggagagtatcagagtgaacccatccatggtgacc
aaactacgagcaaccttcctaaagttggcgtctgcgttggacctgcctctgctgcgtatc
aaccaggctaacagtccagatctgctcagtgtttctcagttctactccggggaactggtg
acctacgtcagaaaggtgttacagatcatccctgagagcatgttcacctccctggctaag
atcatcaagctgcagattcatgccatcatggaggttcccaccagactggacaaggacaag
ctgaaggactacgcccagctgggggctcgctacgaggttgccaaactcacccacgccatc
tccatcttcactgaagggattctgatgatgaagacgacgctggttggaatcatcaaggtg
gatcccaagcagctcctggaagatggtatcaggaaggagttggtgagaagagtagcctac
gctctacacaaaggacttatctttaaccccaaggctaagaccagtgagttgatgccgaag
ctgaaggagatggcagccaccatggacggattctaccggtcctttgagtacatccaggat
tacgtctccatctacggcctgaagatctggcaggaggaggtctctcgtatcatcaactac
aacgtggagcaggagtgtaacagcttcctacgcaccaagatccaggattggcagagtgtc
taccagtcgacccatatccccatacccaagttccccgcggtcgatgagtcggccaccttc
atcggacgactctgtagagagatcctccgcatcacagaccccaaggcgacgtgttacatg
gaccagttgaacacctggtacgacctgaagacccaccaggaggtgaccaacaaccgtctg
ttctctgagatacaggacaccctggggaccttcggcctcaacggcctggacaggctgctc
tgcttcatgatggtcaaggaactgcagaacttcctgtcggtgtttcagaagaccatcctg
agagacaaggctatggtggatgtctttaaagccatgctgagcgctgtcaatcccgtcaaa
ggtattgtggcaaatgccagtaaaggctatgccaacgctgtcgccaaaacacagaagatc
tggggtccgtacttggagtccatcatgaaggttggtcagatgcagatcctgaggcaacag
atcgccaacgagttgaactactcctgcaagtttgactccaaacacctcgctgctgctctg
gaaaacctcaacaagtctctactggctgatatagaagcccactaccaggaccccagcctt
ccataccccaaggaggacaacaacctgctgtatgagatcacagcctctctggaggcagca
ggcattcacaacccactcaacaagatctacattacaaccaagcgcctgccttactttcct
atcgtcaacttcctcttcatcatcgctcagctgcctaaactgcagtacagcaaaaaccaa
gggatgacgtgcaggaaagccaccgacccggtagactggtctcctctggttcttggcctg
ctcactctgctgaagcagttccactccagatacacagagcagttcctggctctcattggg
caattcatacgctccatcatggaacagtgcaccagtcagaagatcccggacatgccgtcc
gatgtggtgggagctctgatgtttctggaggattacgtacgctacaccaaactgcctcgc
aaggtggccgaggcccacgtgccaagtttcatctttgatgagttcaggacagtcctgtga
DBGET
integrated database retrieval system
