Oncorhynchus tshawytscha (Chinook salmon): 112235830
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Entry
112235830 CDS
T05605
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112235830
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112235830
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
zf-U11-48K
Motif
Other DBs
NCBI-GeneID:
112235830
NCBI-ProteinID:
XP_024260128
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Position
LG13:94925209..94936073
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AA seq
710 aa
AA seq
DB search
MVKGSMYPEGLHQHCERCYSIHCHAPVNTSVSCVVIKCHLDCGAAFHKCKEEEHQLLCPN
EMVPCLNVDYGCPFTMLRHRLAKHLEVCPASTVICSQQWIRFPVADTDSSIYRTTLADPE
KQLNVSMALRDQELLFRCLKMKTVFPELMEKEKAEPAQKEIDVGVTSSAGEGCSSLDPSE
AMEDGYNGSGDGMVQEKELSQEEREALAKNMDVATLQNYSSYEAKYRKEMKGCQQTVKNM
EKKLNPGDGEEEKAFSLSNGHRELDGDESSKECQENGATARAVDVTRSGLAPWQDGVMER
LRREVTTADYNMYLVHHGAMLINFGQLAACTPRDKDFVYGKLEPIEVQTVRTFNVPTSYR
PKRIHIHDPWSQMVNKSVDTSDLGVSVEDLPKCDEVNATLLCFLEKELKGHNISESGGAD
GFYVHIGTQTYNIPSAPFKPEASLADIITETHKGLYVQIQAEDITRRHNFTNSAFSYLCG
HVFRRDEYHTHFKNVHLDIQSCLNGWFEQRCPLAYLGCNYSQRRFHPAGQRATVTYHQDL
STFSLKPEGPSMLSDSEKTISITSDRKHPRKLDPLSRLPFEILHHLAGFLDSFSLSQLSQ
VSQLMREVCVTLLEERGMVYLKWEKKTYSHGGSSWKCRKTVWEFSSLFSKVDRWRFDDVP
SMSEHLKVCPLYQREELSQPVKLASMEGARERPQGLLLLSQEYDLPLADQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaggcagtatgtacccagaagggcttcatcagcactgtgagaggtgttacagc
atccactgccatgcccctgtgaacacctctgtctcctgtgtggtcattaagtgtcatcta
gattgtggcgctgccttccataagtgtaaggaggaggagcaccagttactatgtcccaat
gagatggtcccctgcctcaacgttgactacggctgtcccttcaccatgctccgccacagg
ctagccaagcacctggaggtctgtcccgctagcactgtcatctgctcccagcaatggatc
cgcttcccagtggcagacacagactcttccatctacaggaccaccctggctgaccctgag
aagcagctgaacgtgtccatggccctgagagaccaggagctcctcttcagatgcctcaag
atgaagaccgtcttccctgagctgatggagaaggagaaagcagaacctgctcagaaagag
atagatgtaggggtcaccagctctgcaggtgaaggttgtagttcgttagaccccagtgaa
gcaatggaggatggatataacggttctggagatgggatggtgcaggagaaggaactgagt
caggaagagagggaggccttggccaagaacatggacgtggccactctccagaactacagc
tcctatgaggccaagtacagaaaggagatgaagggatgccaacaaaccgtcaaaaacatg
gaaaagaagttgaatcccggtgatggtgaagaagagaaagcatttagcttgtcaaatggt
catagagagctggatggggatgaatcatccaaggagtgccaggagaatggagccactgca
cgtgctgtagacgtcaccaggtctggccttgcaccgtggcaggacggggtcatggagaga
ctgcgtagagaggtcaccactgcagactacaacatgtatttggtccaccatggagctatg
ctgatcaacttcggtcagcttgccgcctgcaccccaagggacaaggactttgtttatgga
aagctggagcccatagaggttcaaactgtcagaacattcaacgttcccacgagctaccgg
ccgaaacggattcacattcacgacccttggtcacagatggtcaacaaaagtgttgacacg
tcagatctaggcgtgtccgtagaagatcttccgaagtgtgatgaagtcaatgcaactttg
ttgtgcttcttggagaaagaactgaagggtcacaacatctcagaaagtggaggagcagac
ggcttctatgtacacattggaacacagacttacaacatcccatctgctccgttcaaacct
gaagcctctctggcagacatcatcacagagacacacaaaggcctctatgtccagatccaa
gctgaggacataaccagaagacacaactttaccaactctgcttttagttacctctgtggc
cacgtcttccgccgcgatgaataccacactcacttcaagaatgtgcacttggacatccag
tcctgcctgaacggctggttcgagcagcgctgccctctagcgtacctaggctgcaactac
agccagaggaggttccatcccgcaggtcagagagccaccgtcacctaccaccaggatctc
agcaccttcagcctcaaaccagagggcccctcaatgctgtccgactctgagaagaccatc
agcatcacctctgacaggaagcatccccgtaagctggacccgttgagcagacttcccttt
gagatcctccatcacctggcagggttcctggacagctttagcctgtctcagctgtcccag
gtgtcccagttgatgagggaggtgtgtgtcacactgctagaggagagggggatggtctat
ctaaaatgggagaagaagacctactcccatggagggtcttcatggaaatgtagaaaaact
gtatgggagtttagcagtctgttttccaaggtggacaggtggcgctttgatgatgtcccc
tccatgtctgagcacctgaaggtctgccctttgtaccagagagaggagctcagtcagcct
gtaaagctagccagcatggagggggccagagagagaccccagggcctactactcctgtcc
caggagtatgacctgcctctagcagaccaatga
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