Oncorhynchus tshawytscha (Chinook salmon): 112235835
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Entry
112235835 CDS
T05605
Name
(RefSeq) thyroid hormone receptor-associated protein 3 isoform X1
KO
K13112
thyroid hormone receptor-associated protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112235835
Spliceosome [BR:
otw03041
]
Complex B
Other components
Complex B specific factors
112235835
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
THRAP3_BCLAF1
Trp_repressor
Motif
Other DBs
NCBI-GeneID:
112235835
NCBI-ProteinID:
XP_024260134
UniProt:
A0A8C8MED2
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Position
LG13:complement(10198496..10222975)
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AA seq
932 aa
AA seq
DB search
MSKAPDGPARTRSKSRSRSCTRSRSRSRSRSRSRKHRYSSRSRSRSRSHSPSHGRNYPTR
DYQNNRGYQRGYNRGFRRPFYFRGRTRGFYPRQGYQRGGNSYGYRANNWQGGGYRDGPPH
DQDHHGPHSPRRGRSRSRTPRKRSGSRSHSRSRYSDRSSSRGSRRSRRNHSSSSRSSSPR
NRRSSPGSGKPGSKDVKDKTTPAEVKEERGGAGEQVGGPGGEGSSHDKASAGKWQGLSDY
NSSPKCSSPAVGAKQGKSDPKGSLWRTMGSTGSVPSTKSPPGSTKAGPTASTSGFGFFGK
EDPTRADDKTAISSAFKKFLAENKNKKQQAAAEWENGQDGDSREKGNSKIGGGLFNITAA
SFSSKADKSLPFLERAEEAFLKSQAAEREEEEVIKPKGATLTTRDVFGKWEDEPHYYPPG
KDEERRRDTAEDVDEDLEHMEEELYRSRKQASKKEEKSKRKEKKKEKSNRRSPSPVSAAV
PPRGSGNGEKDRPLALFPINRLESHLPRSSGKREGLEHSINTFDEMPSSSGSLTKERGLS
RDLVHPSKKDPGQFRSIFQHIQAAQLQRSPSELFAQHIVTIVHYIKAQHFHSSGMTLSER
FAMYQRKAAEMELIKQRKSPEIHRRIDVSPSAFTRHSHLLEELEDCSYKDRGRTAKTDPM
DLRLDIERRKRFSGKEQRDGGKGSQGPSQERSSEKSSKRHKKSKKNKKNRNRSPSSSSSS
SSSPSPFREGFRGKDHMMGEEMEHMDQGYSKPRFGSRDYEGPMDRCPPRDYEGPMDRGPP
RDYEGPMDRGRGRGGGFLPRVRGGGRGWNRGNYQGNTSSNGNPPPNMNAAPPERPPDEDW
DPEYTPKSRKYYFHDDREDEKTWLESCGRGVFPHSRGRFIYRKGGRSPNKWTHDMFQTGE
EGGGNKEEEHHKELDQKDDNQAAVDPSASSKL
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagcgccagatggccccgcaaggaccagatccaagtccaggtccaggtcttgc
acgcggtctcgttccagaagccgctcccgctccagatccaggaagcaccgctacagttct
aggtcacggtcccgctccagatctcactctccgtcccatggcaggaactatcccaccaga
gactaccagaacaaccggggttaccagaggggctacaaccgtggcttccgcagacccttt
tacttccgcggtagaacccggggcttctaccctcgccagggttaccagagaggaggtaac
agctacggctacagagccaacaactggcagggggggggctaccgggacgggccgccccac
gaccaggaccaccacggtcctcacagtcccaggagagggagatctcggtcccgcacgccc
cggaaacgctcaggcagccgcagccactcccggtctcgatactccgaccgttcgtcctcc
aggggttcccgacggtcccggcggaaccacagctcctcttcccgctcctcttccccgcgg
aatcgccgcagcagccccggctcagggaagcctggctctaaagatgtaaaggacaagact
acaccagcagaggtcaaggaggagaggggaggggctggggagcaggtaggaggaccaggg
ggagaaggcagcagtcatgataaggcctctgctgggaaatggcagggtctgagtgactat
aacagcagccccaaatgcagcagtccggctgttggtgccaaacaggggaagtcagacccc
aaagggtcattgtggagaaccatgggcagcactggcagtgttccctctaccaagagccca
ccaggctccaccaaggccgggccgactgcctccaccagtgggtttggtttctttggcaag
gaggatcccaccagagcagacgataagactgctatttcctctgctttcaaaaagttcttg
gcagaaaacaagaacaaaaagcagcaggcggcggcagagtgggagaatggccaggacggc
gacagcagagagaaagggaacagcaagattggaggaggccttttcaacataacagcagcc
tccttcagctccaaggccgataagtctctgcccttcctggaaagagccgaagaggccttc
ctcaagtctcaggctgctgaaagagaggaggaggaggtgatcaagcccaaaggagccacc
ctgacaacacgggatgtgtttgggaagtgggaagacgagccccattactaccccccgggg
aaggacgaggagagacggagagacacggccgaagacgtggatgaagacctggagcacatg
gaagaggagctttaccgcagccgcaagcaggcctccaagaaagaagagaagtccaagagg
aaggagaagaagaaggagaagagcaacaggaggagtccatctcccgtcagcgcagcagtg
ccccctaggggttcaggcaacggggagaaggacaggcccctagccctgttccccatcaat
aggttggagtcacacctaccccggtcctctgggaagagggagggcttggagcacagtatc
aacacatttgatgaaatgcccagctcctctggaagtctgactaaggagcgtggtttgtcc
agggatctggtgcatcccagtaagaaagatcccggacagttccgctccattttccaacac
atacaggctgctcaactccaacgcagcccctccgagctgtttgcgcagcatattgtcacc
attgtgcactacatcaaagcacaacatttccactcttcaggcatgactttaagtgagcga
tttgccatgtaccaaagaaaagcagctgagatggaattgattaaacaaaggaagagtcca
gaaatccacaggagaatcgatgtctcccccagtgcttttaccagacactctcacctgctt
gaggagctggaggactgcagctacaaggatcggggtagaacagcgaaaacggacccaatg
gacctgcgtctggatatagagcgccgtaaaaggttttctgggaaggagcaacgggacggg
ggcaagggctcccagggacccagccaagagaggtcctcagagaaatcttccaaacgccac
aagaaatcaaaaaaaaacaagaagaatcgtaatcgctctccatcctcctcctcctcttcc
tcctcctctccctctcccttcagagaagggttcagaggtaaagaccacatgatgggggag
gaaatggagcatatggaccagggctacagtaagcctcgcttcgggtcccgtgactatgag
ggccccatggataggtgtcccccccgagactatgagggccccatggataggggtcccccc
cgcgactatgagggccccatggataggggccgaggacgtggtggaggatttcttcccaga
gtaagaggaggaggaaggggctggaataggggcaattaccaaggtaacacgagcagcaat
ggcaacccccctcctaatatgaacgccgcccccccagagcgccccccagatgaggactgg
gacccagagtacacccccaagagcaggaaatactactttcatgatgaccgtgaggacgag
aagacatggctggagagctgtggccgaggggtctttccccacagcaggggtcgcttcatc
taccgcaaggggggcagaagccccaacaagtggactcatgacatgttccagactggcgag
gaagggggcgggaacaaggaggaggagcaccacaaagagttggaccagaaagacgacaac
caggccgccgtagacccctcagcttcctccaaactgtag
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