Oncorhynchus tshawytscha (Chinook salmon): 112235987
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Entry
112235987 CDS
T05605
Name
(RefSeq) lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112235987
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
112235987
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
zf-CW
NAD_binding_8
DAO
SWIRM
Thi4
Pyr_redox_2
HI0933_like
Pyr_redox_3
FAD_oxidored
FAD_binding_3
Lycopene_cycl
FAD_binding_2
Pyr_redox
GIDA
NAD_binding_9
2-Hacid_dh_C
AlaDh_PNT_C
IlvN
FMO-like
TrkA_N
zf-RING_2
Attractin
Motif
Other DBs
NCBI-GeneID:
112235987
NCBI-ProteinID:
XP_042151094
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Position
LG13:10467543..10483254
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AA seq
837 aa
AA seq
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MLTDADYTVNASGARRAKKRTAMESSSGDGQSSLRSSGRQVNVRMKRCNNPPPGQTKRKA
TDTEEEEDQAEKKYRKCEKAGCSATYPVCFASASERCAKNGYTSRWYHLSCGEHFCNECF
DHYYRSHKDGYETYASWKRVWTGNGKSEPSLKAFMADQQLPYWVQCTKPDCGKWRQLTKE
IQLTASLAATYRCGMKFNNVKTEGPDQCSLPEDLRVAEVIDSWWHSMLILPPLFKDSPAN
PFLTAYYPDCVGMSPSGSTSNHSHAELRAEHCRAIPPQIPGLCPYFQPFYQPNECGKALC
VRPDMMELDELYEFPEFSRDPTMYLALRNLILASWHRGCKEVLTPQNCAPHIIVRGLVRV
RCVQEMDRVLLFMTRKGLINTGVLSVKQPLLPERYHNKNVIVIGAGASGLAAARQLQNFG
MQVVMLEASERIGGRVWDDTSLGGVTVGRGAQIVNGCVNNPIALMSEQLSIKMHKLGERC
DLFQEGGSATDPAIDKRMDFHFNAILDVVSEWRKDKSQNQDTPLGEKIQEVYKTFLQESG
VQFSQLEEKVLQFHLSNLEYACGSTLDQVSARSWDHNEFFAQFSGDHTLLTEGYSSVLNK
LAEGLDIRIKSPVQAIDYSGDIVKVTSSNGTQWTAQKVLVTVPLTLLQKNIIQFNPPLPE
RKLKAIHSLGAGLIEKVALQFPFRFWDGKIQGADYFGHIPPSPDKRGMFGVFYDMDPQGK
RSVLMSVISGEAVPSIRDMEDKDVADQCMKVLRELFKEQEVPDPVNYFVTRWSRDMWSQM
SYSFVKTGGSGEAYDIIAEDVQGKVFFAGEATNRHFPQTVTGAYLSGVREASKIAAL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgctgacagatgcagattatacagtgaatgcttcaggtgctcggcgtgccaagaagagg
acagcaatggagtcatcatctggggatggtcagtcgtcccttcgctcctctggtagacag
gtgaacgtcagaatgaagcgctgcaataatcctccacctggacagactaaaagaaaagcc
actgacacagaggaagaagaggaccaagctgagaagaagtacagaaagtgtgaaaaggct
ggatgctcagccacatacccagtgtgctttgctagtgcctctgaaaggtgcgccaaaaac
ggctacacttctcggtggtaccatttgtcctgcggggagcacttttgcaacgagtgtttc
gatcactactatagaagtcacaaagatggctatgagacatatgcatcctggaagagggtt
tggactggcaatgggaagagtgagcccagtctgaaagctttcatggccgatcaacagctt
ccatactgggtccaatgcactaagccagactgtgggaaatggcgtcagctaaccaaggag
atccagctcactgcctcactagcagccacgtatcgctgtggcatgaagttcaacaatgtc
aagaccgaagggccagaccagtgctctctgccagaagatttgagagtggcggaggtgatc
gacagctggtggcattccatgctgatcctgcccccgttatttaaggacagcccggccaac
cctttcctcacagcctactatcccgactgtgtgggcatgagcccctcaggatccaccagc
aaccactctcatgctgagttgagggcagagcactgcagagccatcccaccacagattcca
gggctgtgtccatacttccagcccttttaccaacccaacgagtgtgggaaggccttgtgt
gtgcgaccggacatgatggagctggatgagctctatgagtttccagagttttcccgtgac
cccaccatgtacctggccctgcgtaaccttatcctggcctcctggcacagaggctgtaag
gaggtgctgacaccccagaactgtgctccccacatcattgtgagagggctggtacgtgtg
cgttgtgtacaggaaatggacagggtgcttctcttcatgaccaggaagggtctgatcaac
actggggttctatcagtcaaacagcccctgcttcccgagcgctaccacaacaagaacgtg
attgtgattggagccggggcatcggggctggctgctgcgcggcaactgcaaaactttggc
atgcaggtggtgatgctcgaggcgagtgagcggattggagggcgggtgtgggacgataca
tcgctgggcggcgtcactgtgggtcggggggctcagattgtgaacggctgtgtgaacaac
ccaattgcactgatgagtgagcagctcagcattaaaatgcacaagctgggggagaggtgt
gacctgttccaggagggagggagtgccacagacccggccatcgataagcgcatggacttc
cactttaacgccatcctggatgtggtgtcagaatggagaaaagacaagtctcagaaccag
gacactcctctgggagagaaaatccaggaggtctacaagacattccttcaggagtctggg
gtccagttcagccaattggaggagaaagtgcttcagttccatctcagcaacctggaatat
gcctgtggaagcacactggaccaggtgtcggctcgatcctgggaccacaatgagttcttt
gctcagttctcaggagaccatacactgctgacagagggctattcgtctgtgcttaacaaa
ctggctgagggcctcgacatccgcatcaagagcccggttcaagctatcgattactcaggg
gatatagtcaaagttacctcatccaatgggactcagtggacagcacagaaagttctggtg
acagtcccattgactttactccagaagaatataattcaattcaaccctcctcttcctgag
agaaagctgaaagccatccacagtcttggagcaggtctcattgaaaaggttgctctgcag
ttcccgtttcgcttctgggacggaaagatccaaggagcagattactttggccacattcca
cccagtcctgacaagagagggatgtttggtgtgttctatgacatggatccacagggaaaa
cggagtgtcttgatgtccgtcatcagtggtgaagctgtgccttctatcagggacatggag
gacaaagatgtcgctgatcagtgcatgaaggtgctgcgtgaactcttcaaggagcaggag
gtccccgatccggtgaattactttgtgactcggtggagcagagacatgtggtctcagatg
tcatacagcttcgtgaagacagggggcagcggggaggcctatgacatcattgctgaagat
gtgcaaggaaaggtgttctttgctggggaggcgaccaacaggcactttcctcagacggta
acaggagcctatttgagtggcgtccgagaagcaagtaaaatagctgctttgtaa
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