Oncorhynchus tshawytscha (Chinook salmon): 112236002
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Entry
112236002 CDS
T05605
Name
(RefSeq) homeobox protein Nkx-2.1-like
KO
K09342
homeobox protein Nkx-2.1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112236002
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
112236002
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
112236002
NCBI-ProteinID:
XP_024260341
UniProt:
A0A8C8FJB5
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Position
LG08:complement(13112262..13116595)
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AA seq
344 aa
AA seq
DB search
MSMSPRHTTPFSVSDILSPLEESYKKVSMENNNLGSPLASYRQPQVSQAMMQQHHMGHNG
TVSAAYHMTATGVSQLSHTAMGGYCNGNLGNMSDLTPYQDGMRGSATAAGWYGANTDPRF
STISRFMGSSSGMNMGSMGSLGSLVDVGKGMGPLSSTPRRKRRVLFSQAQVYELERRFKQ
QKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKVSQQQMQQDSSSCQQHSPR
RVAVPVLVKDGKPCQGSAHTPTTTVQAHHQQGANVMIMSSNGSGLGQHQSQQVGSADHSP
DLAQHSASPPSLQTQVAGLSHLNSSSAEYGTALQCSALLYGRTW
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgagccctaggcatacgactcctttttctgtttccgatatcttgagtcctctt
gaggagagctacaagaaagtaagtatggagaataacaacttggggtcacctctcgcgtcg
taccggcagccgcaggtgtctcaggcgatgatgcagcagcaccacatgggccataacggg
acggtgtccgcggcataccatatgactgcgacgggagtgtcccagctgtcacacaccgca
atggggggctactgtaacggcaacctggggaacatgagcgacctgacgccctaccaggac
ggcatgagaggcagcgccacggccgctggctggtacggagccaacacagacccgcgattc
tccacgatctcgcgcttcatgggctcttcttcgggcatgaacatgggcagtatgggcagc
cttggctcgctagtagacgtggggaaaggcatgggcccgctctcgagcaccccgagaagg
aagaggcgcgtgctgttctctcaggctcaggtctacgagctcgagcggcgattcaaacaa
cagaagtacctatcggcgcctgagagagaacacctggcgagcatgatccacctcaccccg
acccaggtcaaaatctggtttcagaaccaccgatataaaatgaagaggcaagcgaaggac
aaagtgtcgcagcagcagatgcaacaggacagtagttcctgtcagcagcattcccctcgg
cgggtggctgtgcctgtgttagtgaaagatggcaagccatgccaaggcagtgcccacact
cccaccactactgtccaggcccaccaccaacaaggtgccaatgttatgatcatgtccagt
aacggttcaggcctaggtcagcaccagagccaacaggtgggtagtgcagatcactctcca
gacctagcacaacactccgccagcccaccgtctctccagacccaggtagccggcctctct
cacctgaactcctccagcgccgagtacgggacggccctgcagtgctctgctctgttatat
ggcaggacatggtga
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