Oncorhynchus tshawytscha (Chinook salmon): 112236019
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Entry
112236019 CDS
T05605
Name
(RefSeq) zinc finger and BTB domain-containing protein 10 isoform X1
KO
K10497
zinc finger and BTB domain-containing protein 10
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112236019
04121 Ubiquitin system [BR:
otw04121
]
112236019
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
112236019
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
112236019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C17orf113
zf-H2C2_5
BTB_SANBR
BTB_KLHL33
zf-C2H2
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
112236019
NCBI-ProteinID:
XP_042165952
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Position
LG31:complement(28804518..28844112)
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AA seq
753 aa
AA seq
DB search
MSGERNRRSLAFRGGGLAVTSSSGVGGGNSNSWEAQACQDRHLNGNRPDQEEDRDLGAKG
PSQGRVEGGGSLSDSAEPEAEEEEDPEGGNWAAGVGDDRVGWVAVTVGEDESREGSSRTA
GNCLNNEDGADLGSGGTGSEDDRGEAARKSWVEMRPQTLLQKHPQFQASWLQEFPWLTFC
QETGLMSCSWCHNIPTKNNDELVRGSRNYKRALLLRHHLSSEHGRNDPTKQELERPGCED
PPQGTDMETEDYYSNNKPNQDSYCYQLLQELDKQRKGGILCDVNIVVSGEVFRAHKNILV
AGSRYFKTLYCLTKSENSSSSSSPSDQTTTVTVTHLDVAAGAGFSVILDFLYSGNLLLTS
QNAIEVMSMASFLQMTEVVGSCRGFIKEALNISIKQEAPDSVVVDYNKRRTVAKDGAGQL
GSDGSTNKKPGCNFWATSILSKLSIKASGHVNNGDQVGGGSVKEEPSDVMVSAGEGCALG
SSGWGCENSSESAENEPPSVPGPVFVWNEPAPGAAAGGPVAVKRENQKADLGSGRRKKQI
TRRFVYNIPPESEEGFDEGMFVQPSASYPREDFSFLSENAELANQFQYSLLQESQQGESW
ENGESSDTALNKLKCPHCNYIAKHRRTLKRHLIIHSGVRSFSCDLCGKLFTRREHVKRHS
LVHKKDKKYKCMVCKKIFMLAASVGIRHGSRRYGVCVDCAESHQSTQEGLESLEVFVRED
DDFEGEEPDEDMAEEGEEPNDNDQSNLEGDTGS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagagagaaaccgcaggtctctggcgttccgaggaggtggattagcggtaacc
agctccagtggtgtcggtgggggcaacagtaacagctgggaggcccaggcctgtcaagac
cgacatttgaacgggaacaggccagatcaagaagaggatagggatctgggggcaaaagga
ccatcgcaagggagagtggagggtgggggatctctcagtgatagcgcagaaccagaggct
gaggaggaagaggacccggaagggggcaactgggcagccggggtaggagacgatcgtgtc
ggttgggtggcagtaactgtcggagaagacgagtccagggaagggagtagccggacagcg
ggtaactgcctgaacaacgaggacggcgctgacttgggcagcgggggcactggatccgag
gacgacagaggcgaagctgccaggaaatcttgggtagaaatgagaccgcagacgctactc
cagaaacacccccaattccaagcttcatggctacaggagtttccatggctcacattttgt
caggagacgggacttatgtcctgctcctggtgtcacaacattcccactaaaaacaacgac
gagctggtgagaggtagtcgaaattacaagcgggccttgctgctgagacatcacctgtct
tctgaacacgggaggaatgacccgacaaaacaggagctggagcggcctggctgtgaggac
cccccccaggggacagacatggagacagaagactactacagcaataacaaacctaaccag
gactcgtactgctaccagctgctgcaggaactggacaaacaacgcaagggaggaatcctg
tgtgacgtcaacatcgttgtgagtggagaggtgttccgggcacacaagaacatcctcgtg
gccgggagccgctacttcaagaccctctactgcctgaccaagagcgagaactcctcttcc
tcatcctcgccatctgaccagacgaccacagtcaccgtcacccatctagacgtggcggcc
ggggcggggttctcagtcatcctggacttcctgtatagcggtaacctcctactgaccagt
cagaatgccatcgaggtgatgtccatggcctctttcctccaaatgacggaggtggtggga
tcgtgtcgggggttcatcaaggaagcactcaacatcagcatcaagcaggaggccccggac
tcagtggtggtggattacaacaaaaggagaacggtggccaaagacggagcaggacagctg
ggctcggacggcagcaccaacaagaagcctggatgtaacttctgggccaccagcatcctg
tccaagctgtcgataaaagccagtggtcatgtcaacaatggggaccaggtagggggaggc
agcgtgaaggaggagcccagtgatgtgatggtatctgcgggggagggctgcgctctgggg
agctccggctggggctgtgagaactcgtccgagtcggctgagaacgagcctccgagcgtt
ccggggccggtgttcgtctggaacgagccggctcccggtgcggcggcgggcgggccggtg
gcggtgaagcgggaaaatcagaaggcagacctggggagcgggcggaggaagaaacagatc
acacggcggttcgtctacaacatcccaccggagtcggaagaagggtttgacgaggggatg
ttcgtccagccctcagcctcctaccccagggaggacttctccttcctctctgagaatgcc
gaactggccaatcagtttcagtacagcctcctgcaagagtcccagcaaggggagtcctgg
gagaatggcgagtcgtccgacacggccctgaataagctcaagtgtccccactgtaactac
atcgccaagcaccggagaacactaaagaggcacctcatcattcactctggcgtccgctcc
ttcagctgtgatctctgtggcaagctgttcacccgcagagagcacgtcaagagacattcc
ctggtgcacaagaaggacaaaaagtacaagtgcatggtgtgcaagaagatcttcatgctg
gcggccagcgtggggatccggcacggctcacggcgctatggtgtgtgtgtggactgtgct
gaatcccaccagtccacgcaggagggcctggagtccctggaggtgttcgtccgcgaggat
gatgactttgagggggaggagcctgacgaggacatggctgaggagggggaggagcctaac
gacaacgaccaatccaacttggagggtgacactggtagttaa
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