Oncorhynchus tshawytscha (Chinook salmon): 112236024
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Entry
112236024 CDS
T05605
Name
(RefSeq) TRAF family member-associated NF-kappa-B activator
KO
K12650
TRAF family member-associated NF-kappa-B activator
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
otw04621
NOD-like receptor signaling pathway
otw04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112236024
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
112236024
04622 RIG-I-like receptor signaling pathway
112236024
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Gene cluster
GFIT
Motif
Pfam:
TBD
MIP-T3_C
Motif
Other DBs
NCBI-GeneID:
112236024
NCBI-ProteinID:
XP_024260367
UniProt:
A0A8C8J6F8
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Position
LG03:42466233..42492768
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AA seq
366 aa
AA seq
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MERNIGDQLNKAFEAYRQASIERDSAKRELQKTNEYYQRHTQKLQKQIEDQQQLISKLKV
QLIAATKQPSGEVKGEAVPRKQEEENLSPSNHRFDNPSSSFRKIHYLKGNMETAMIVSPS
PHTAPVNNSFEKKDVFEAFQALQGKFQQIQTLTRRQKDHLKKISKGNYMANEQQFSMPIQ
CTDVTAEQAERPFPSALRPVVILQHPPTSLASRGASQEDRDLVDSLTRLSVKFPPSTDSE
YEFLNSAPEKHFDPSMPRQWAAVSSIPAIIEESSMALAIPFLYPTSPSHPTSPSTSLSHE
SVRGPLQPLWSPELCDAVAAQAVSAKPQQQINSSPDICAYCNAEVPQDHMKSHLFTHCQR
ESEASN
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaatattggagaccagctcaacaaggcatttgaagcttaccgccaggcctct
atcgagcgagacagcgccaaaagggaactacagaagacgaatgaatattatcaacggcac
actcagaaacttcagaaacagatagaagaccagcagcagttgatttcaaaactcaaagtt
cagttgatagcagcaactaagcaaccttcaggagaggtgaaaggtgaggctgttcctaga
aaacaggaagaggaaaacctgtctccttccaaccatcgctttgacaacccaagcagctcc
ttccggaagattcattacttgaaagggaacatggaaactgcaatgattgtgtcaccttca
ccacacacagcacctgtaaacaacagttttgagaaaaaagatgtttttgaggcgtttcaa
gctcttcaggggaaattccagcagatacagacattaacccggagacaaaaagatcacctg
aaaaaaatctccaaaggaaattacatggcaaatgagcagcagttctccatgcccattcag
tgtacagacgtgactgcggagcaggcggagaggcccttcccctcagccttaaggccagtg
gtcatcctccagcacccgcccacgtccctggcatcccgtggtgccagccaagaggacaga
gacctagtggactccctcaccagactcagcgtcaagttccccccctccacagacagtgaa
tacgagttcctgaacagcgctccagagaaacactttgacccgtctatgccaaggcaatgg
gcagcagtcagcagtatccctgccatcatagaggaatcgtctatggcgctggccatccca
ttcctgtatcctacgtctccctctcaccccacctccccctccacctcactgtcacacgag
agtgtgcgtggacccctgcagcctctgtggagccctgagctttgtgatgcagtagcagca
caggccgtgagtgcgaagccacaacaacagatcaacagcagccctgatatctgtgcctac
tgcaacgcggaagttccccaagaccatatgaaaagccaccttttcactcattgccagagg
gagagtgaagccagcaattga
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